RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 STX8Q9UNK0 236 aa17.58■□□□□ 0.4
RABGGTA-211ENST00000559850 MTMR7Q9Y216 660 aa17.58■□□□□ 0.4
RABGGTA-211ENST00000559850 CENPFP49454 3210 aa17.58■□□□□ 0.4
RABGGTA-211ENST00000559850 ZNF213O14771 459 aa17.57■□□□□ 0.4
RABGGTA-211ENST00000559850 FGRP09769 529 aa17.57■□□□□ 0.4
RABGGTA-211ENST00000559850 MAPK4P31152 587 aa17.57■□□□□ 0.4
RABGGTA-211ENST00000559850 TRIM32Q13049 653 aa17.57■□□□□ 0.4
RABGGTA-211ENST00000559850 IRF5Q13568 498 aa17.57■□□□□ 0.4
RABGGTA-211ENST00000559850 PLEKHH3Q7Z736 793 aa17.57■□□□□ 0.4
RABGGTA-211ENST00000559850 SLAIN1Q8ND83 568 aa17.57■□□□□ 0.4
RABGGTA-211ENST00000559850 MKL1Q969V6 931 aa17.57■□□□□ 0.4
RABGGTA-211ENST00000559850 CCDC136Q96JN2 1154 aa17.57■□□□□ 0.4
RABGGTA-211ENST00000559850 MOV10L1Q9BXT6 1211 aaKnown RBP17.57■□□□□ 0.4
RABGGTA-211ENST00000559850 ISY1Q9ULR0 285 aaKnown RBP17.57■□□□□ 0.4
RABGGTA-211ENST00000559850 ZNFX1Q9P2E3 1918 aaKnown RBP17.57■□□□□ 0.4
RABGGTA-211ENST00000559850 INHAP05111 366 aa17.56■□□□□ 0.4
RABGGTA-211ENST00000559850 CCL5P13501 91 aa17.56■□□□□ 0.4
RABGGTA-211ENST00000559850 MLLT1Q03111 559 aaPredicted RBP17.56■□□□□ 0.4
RABGGTA-211ENST00000559850 TMEM132BQ14DG7 1078 aa17.56■□□□□ 0.4
RABGGTA-211ENST00000559850 AKNAD1Q5T1N1 836 aa17.56■□□□□ 0.4
RABGGTA-211ENST00000559850 SLFN13Q68D06 897 aa17.56■□□□□ 0.4
RABGGTA-211ENST00000559850 MFSD6Q6ZSS7 791 aa17.56■□□□□ 0.4
RABGGTA-211ENST00000559850 DSCC1Q9BVC3 393 aa17.56■□□□□ 0.4
RABGGTA-211ENST00000559850 TMEM106CQ9BVX2 250 aa17.56■□□□□ 0.4
RABGGTA-211ENST00000559850 SPATC1LQ9H0A9 340 aa17.56■□□□□ 0.4
RABGGTA-211ENST00000559850 UNC93B1Q9H1C4 597 aa17.56■□□□□ 0.4
RABGGTA-211ENST00000559850 NEFLP07196 543 aa17.55■□□□□ 0.4
RABGGTA-211ENST00000559850 CCNA1P78396 465 aa17.55■□□□□ 0.4
RABGGTA-211ENST00000559850 PTH1RQ03431 593 aa17.55■□□□□ 0.4
RABGGTA-211ENST00000559850 CCL14Q16627 93 aa17.55■□□□□ 0.4
RABGGTA-211ENST00000559850 STAG1Q8WVM7 1258 aa17.55■□□□□ 0.4
RABGGTA-211ENST00000559850 TRIB2Q92519 343 aa17.55■□□□□ 0.4
RABGGTA-211ENST00000559850 NUDT12Q9BQG2 462 aa17.55■□□□□ 0.4
RABGGTA-211ENST00000559850 ZKSCAN3Q9BRR0 538 aa17.55■□□□□ 0.4
RABGGTA-211ENST00000559850 PPP1R9AQ9ULJ8 1098 aa17.55■□□□□ 0.4
RABGGTA-211ENST00000559850 VWA5AO00534 786 aa17.54■□□□□ 0.4
RABGGTA-211ENST00000559850 ERCC3P19447 782 aa17.54■□□□□ 0.4
RABGGTA-211ENST00000559850 UBXN2AP68543 259 aa17.54■□□□□ 0.4
RABGGTA-211ENST00000559850 MORN1Q5T089 497 aa17.54■□□□□ 0.4
RABGGTA-211ENST00000559850 NCAPG2Q86XI2 1143 aa17.54■□□□□ 0.4
RABGGTA-211ENST00000559850 GMCL1P1Q8NEA9 526 aa17.54■□□□□ 0.4
RABGGTA-211ENST00000559850 PXYLP1Q8TE99 480 aa17.54■□□□□ 0.4
RABGGTA-211ENST00000559850 KIFC2Q96AC6 838 aa17.54■□□□□ 0.4
RABGGTA-211ENST00000559850 SLF1Q9BQI6 1058 aa17.54■□□□□ 0.4
RABGGTA-211ENST00000559850 ADAMTS5Q9UNA0 930 aa17.54■□□□□ 0.4
RABGGTA-211ENST00000559850 KIAA0100Q14667 2235 aaKnown RBP17.53■□□□□ 0.4
RABGGTA-211ENST00000559850 RAD50Q92878 1312 aa17.53■□□□□ 0.4
RABGGTA-211ENST00000559850 PLXNA1Q9UIW2 1896 aa17.53■□□□□ 0.4
RABGGTA-211ENST00000559850 PTPREP23469 700 aa17.53■□□□□ 0.4
RABGGTA-211ENST00000559850 MCCP23508 829 aa17.53■□□□□ 0.4
RABGGTA-211ENST00000559850 SLC4A3P48751 1232 aa17.53■□□□□ 0.4
RABGGTA-211ENST00000559850 REPS2Q8NFH8 660 aa17.53■□□□□ 0.4
RABGGTA-211ENST00000559850 RUFY2Q8WXA3 655 aa17.53■□□□□ 0.4
RABGGTA-211ENST00000559850 SOCS4Q8WXH5 440 aa17.53■□□□□ 0.4
RABGGTA-211ENST00000559850 USP6NLQ92738 828 aa17.53■□□□□ 0.4
RABGGTA-211ENST00000559850 RNF208Q9H0X6 261 aa17.53■□□□□ 0.4
RABGGTA-211ENST00000559850 ZNF236Q9UL36 1845 aa17.53■□□□□ 0.4
RABGGTA-211ENST00000559850 B4E1Z4 1266 aa17.52■□□□□ 0.4
RABGGTA-211ENST00000559850 SGSM2O43147 1006 aa17.52■□□□□ 0.4
RABGGTA-211ENST00000559850 KDM4AO75164 1064 aa17.52■□□□□ 0.4
RABGGTA-211ENST00000559850 BMP3P12645 472 aa17.52■□□□□ 0.4
RABGGTA-211ENST00000559850 RGS2P41220 211 aa17.52■□□□□ 0.4
RABGGTA-211ENST00000559850 MAP2K5Q13163 448 aa17.52■□□□□ 0.4
RABGGTA-211ENST00000559850 IMMTQ16891 758 aaKnown RBP17.52■□□□□ 0.4
RABGGTA-211ENST00000559850 KCTD1Q719H9 257 aa17.52■□□□□ 0.4
RABGGTA-211ENST00000559850 MB21D1Q8N884 522 aa17.52■□□□□ 0.4
RABGGTA-211ENST00000559850 TMEM47Q9BQJ4 181 aa17.52■□□□□ 0.4
RABGGTA-211ENST00000559850 RNF41Q9H4P4 317 aaPredicted RBP17.52■□□□□ 0.4
RABGGTA-211ENST00000559850 CTNNA3Q9UI47 895 aa17.52■□□□□ 0.4
RABGGTA-211ENST00000559850 TNRC18O15417 2968 aaPredicted RBP17.51■□□□□ 0.39
RABGGTA-211ENST00000559850 SLC15A5A6NIM6 579 aa17.51■□□□□ 0.39
RABGGTA-211ENST00000559850 TMEM232C9JQI7 657 aa17.51■□□□□ 0.39
RABGGTA-211ENST00000559850 SLC1A4P43007 532 aa17.51■□□□□ 0.39
RABGGTA-211ENST00000559850 NOVP48745 357 aa17.51■□□□□ 0.39
RABGGTA-211ENST00000559850 SNAP25P60880 206 aa17.51■□□□□ 0.39
RABGGTA-211ENST00000559850 GRB14Q14449 540 aa17.51■□□□□ 0.39
RABGGTA-211ENST00000559850 CPXCR1Q8N123 301 aa17.51■□□□□ 0.39
RABGGTA-211ENST00000559850 NPLOC4Q8TAT6 608 aa17.51■□□□□ 0.39
RABGGTA-211ENST00000559850 SHISA4Q96DD7 197 aa17.51■□□□□ 0.39
RABGGTA-211ENST00000559850 FLRT1Q9NZU1 646 aa17.51■□□□□ 0.39
RABGGTA-211ENST00000559850 ZNF214Q9UL59 606 aaPredicted RBP17.51■□□□□ 0.39
RABGGTA-211ENST00000559850 TAF6LQ9Y6J9 622 aa17.51■□□□□ 0.39
RABGGTA-211ENST00000559850 IVNS1ABPQ9Y6Y0 642 aa17.51■□□□□ 0.39
RABGGTA-211ENST00000559850 FRMPD2Q68DX3 1309 aaPredicted RBP17.5■□□□□ 0.39
RABGGTA-211ENST00000559850 HMGCRP04035 888 aa17.5■□□□□ 0.39
RABGGTA-211ENST00000559850 ZKSCAN1P17029 563 aaPredicted RBP17.5■□□□□ 0.39
RABGGTA-211ENST00000559850 STAT3P40763 770 aa17.5■□□□□ 0.39
RABGGTA-211ENST00000559850 IKQ13123 557 aaPredicted RBP17.5■□□□□ 0.39
RABGGTA-211ENST00000559850 CCDC96Q2M329 555 aa17.5■□□□□ 0.39
RABGGTA-211ENST00000559850 RCSD1Q6JBY9 416 aa17.5■□□□□ 0.39
RABGGTA-211ENST00000559850 PRPF38AQ8NAV1 312 aaKnown RBP17.5■□□□□ 0.39
RABGGTA-211ENST00000559850 ESR2Q92731 530 aa17.5■□□□□ 0.39
RABGGTA-211ENST00000559850 GMCL1Q96IK5 515 aa17.5■□□□□ 0.39
RABGGTA-211ENST00000559850 APBA2Q99767 749 aa17.5■□□□□ 0.39
RABGGTA-211ENST00000559850 RAVER2Q9HCJ3 691 aaKnown RBP17.5■□□□□ 0.39
RABGGTA-211ENST00000559850 TCP11L1Q9NUJ3 509 aa17.5■□□□□ 0.39
RABGGTA-211ENST00000559850 FEM1BQ9UK73 627 aa17.5■□□□□ 0.39
RABGGTA-211ENST00000559850 SYNPO2Q9UMS6 1093 aa17.5■□□□□ 0.39
RABGGTA-211ENST00000559850 FRMPD3Q5JV73 1810 aa17.49■□□□□ 0.39
RABGGTA-211ENST00000559850 TOP1P11387 765 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms