RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 PATL2C9JE40 543 aaKnown RBP14.64□□□□□ -0.07
SPG11-219ENST00000559822 SLC3A2P08195 630 aaKnown RBP14.64□□□□□ -0.07
SPG11-219ENST00000559822 COL6A1P12109 1028 aa14.64□□□□□ -0.07
SPG11-219ENST00000559822 CYBAP13498 195 aa14.64□□□□□ -0.07
SPG11-219ENST00000559822 MX1P20591 662 aa14.64□□□□□ -0.07
SPG11-219ENST00000559822 CYP2C19P33261 490 aa14.64□□□□□ -0.07
SPG11-219ENST00000559822 RIOX2Q8IUF8 465 aa14.64□□□□□ -0.07
SPG11-219ENST00000559822 ZNF444Q8N0Y2 327 aaPredicted RBP14.64□□□□□ -0.07
SPG11-219ENST00000559822 PI4K2BQ8TCG2 481 aa14.64□□□□□ -0.07
SPG11-219ENST00000559822 NYAP2Q9P242 653 aa14.64□□□□□ -0.07
SPG11-219ENST00000559822 PPP1R9AQ9ULJ8 1098 aa14.64□□□□□ -0.07
SPG11-219ENST00000559822 ADAMTS5Q9UNA0 930 aa14.64□□□□□ -0.07
SPG11-219ENST00000559822 PARP14Q460N5 1801 aa14.64□□□□□ -0.07
SPG11-219ENST00000559822 FRMPD3Q5JV73 1810 aa14.64□□□□□ -0.07
SPG11-219ENST00000559822 PFASO15067 1338 aa14.64□□□□□ -0.07
SPG11-219ENST00000559822 M0R2C6 588 aa14.63□□□□□ -0.07
SPG11-219ENST00000559822 TMEM132BQ14DG7 1078 aa14.63□□□□□ -0.07
SPG11-219ENST00000559822 FAM83BQ5T0W9 1011 aa14.63□□□□□ -0.07
SPG11-219ENST00000559822 SLF1Q9BQI6 1058 aa14.63□□□□□ -0.07
SPG11-219ENST00000559822 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.63□□□□□ -0.07
SPG11-219ENST00000559822 EPB41L4AQ9HCS5 686 aaPredicted RBP14.63□□□□□ -0.07
SPG11-219ENST00000559822 ZMYND8Q9ULU4 1186 aaPredicted RBP14.63□□□□□ -0.07
SPG11-219ENST00000559822 SYNPO2Q9UMS6 1093 aa14.63□□□□□ -0.07
SPG11-219ENST00000559822 DNM1LO00429 736 aa14.62□□□□□ -0.07
SPG11-219ENST00000559822 VWA5AO00534 786 aa14.62□□□□□ -0.07
SPG11-219ENST00000559822 IGHA2P01877 340 aa14.62□□□□□ -0.07
SPG11-219ENST00000559822 BMP8BP34820 402 aa14.62□□□□□ -0.07
SPG11-219ENST00000559822 STAT3P40763 770 aa14.62□□□□□ -0.07
SPG11-219ENST00000559822 PDE4BQ07343 736 aa14.62□□□□□ -0.07
SPG11-219ENST00000559822 KCTD2Q14681 263 aa14.62□□□□□ -0.07
SPG11-219ENST00000559822 IFNL3Q8IZI9 196 aa14.62□□□□□ -0.07
SPG11-219ENST00000559822 STK11IPQ8N1F8 1099 aa14.62□□□□□ -0.07
SPG11-219ENST00000559822 ARRDC4Q8NCT1 418 aa14.62□□□□□ -0.07
SPG11-219ENST00000559822 MMP19Q99542 508 aa14.62□□□□□ -0.07
SPG11-219ENST00000559822 GDF15Q99988 308 aa14.62□□□□□ -0.07
SPG11-219ENST00000559822 NAPBQ9H115 298 aa14.62□□□□□ -0.07
SPG11-219ENST00000559822 FBXO28Q9NVF7 368 aa14.62□□□□□ -0.07
SPG11-219ENST00000559822 STAP2Q9UGK3 403 aa14.62□□□□□ -0.07
SPG11-219ENST00000559822 NRBP1Q9UHY1 535 aa14.62□□□□□ -0.07
SPG11-219ENST00000559822 F5H6K3 240 aa14.61□□□□□ -0.07
SPG11-219ENST00000559822 SEPT4O43236 478 aa14.61□□□□□ -0.07
SPG11-219ENST00000559822 COBLO75128 1261 aa14.61□□□□□ -0.07
SPG11-219ENST00000559822 KLRC3Q07444 240 aa14.61□□□□□ -0.07
SPG11-219ENST00000559822 PPP4R3BQ5MIZ7 849 aa14.61□□□□□ -0.07
SPG11-219ENST00000559822 ZMYM1Q5SVZ6 1142 aa14.61□□□□□ -0.07
SPG11-219ENST00000559822 MAML3Q96JK9 1138 aa14.61□□□□□ -0.07
SPG11-219ENST00000559822 TEX13BQ9BXU2 312 aa14.61□□□□□ -0.07
SPG11-219ENST00000559822 DIS3Q9Y2L1 958 aaKnown RBP14.61□□□□□ -0.07
SPG11-219ENST00000559822 CTDP1Q9Y5B0 961 aaPredicted RBP14.61□□□□□ -0.07
SPG11-219ENST00000559822 COL11A1P12107 1806 aaPredicted RBP14.61□□□□□ -0.07
SPG11-219ENST00000559822 KBTBD13C9JR72 458 aa14.6□□□□□ -0.07
SPG11-219ENST00000559822 TTLL1O95922 423 aa14.6□□□□□ -0.07
SPG11-219ENST00000559822 NDUFB10O96000 172 aa14.6□□□□□ -0.07
SPG11-219ENST00000559822 TSPY3P0CV98 308 aa14.6□□□□□ -0.07
SPG11-219ENST00000559822 TSPY8P0CW00 308 aa14.6□□□□□ -0.07
SPG11-219ENST00000559822 AAMPQ13685 434 aa14.6□□□□□ -0.07
SPG11-219ENST00000559822 ANKRD45Q5TZF3 282 aa14.6□□□□□ -0.07
SPG11-219ENST00000559822 PRPF38AQ8NAV1 312 aaKnown RBP14.6□□□□□ -0.07
SPG11-219ENST00000559822 TRPV1Q8NER1 839 aa14.6□□□□□ -0.07
SPG11-219ENST00000559822 OTUD7AQ8TE49 926 aaPredicted RBP14.6□□□□□ -0.07
SPG11-219ENST00000559822 SENP6Q9GZR1 1112 aaPredicted RBP14.6□□□□□ -0.07
SPG11-219ENST00000559822 CLIP2Q9UDT6 1046 aa14.6□□□□□ -0.07
SPG11-219ENST00000559822 ZNF214Q9UL59 606 aaPredicted RBP14.6□□□□□ -0.07
SPG11-219ENST00000559822 PLIN4Q96Q06 1357 aa14.6□□□□□ -0.07
SPG11-219ENST00000559822 IGKV6D-41A0A0C4DH26 115 aa14.59□□□□□ -0.07
SPG11-219ENST00000559822 ZBED4O75132 1171 aa14.59□□□□□ -0.07
SPG11-219ENST00000559822 PRDM1O75626 825 aa14.59□□□□□ -0.07
SPG11-219ENST00000559822 SYN1P17600 705 aa14.59□□□□□ -0.07
SPG11-219ENST00000559822 MAGEA10P43363 369 aaPredicted RBP14.59□□□□□ -0.07
SPG11-219ENST00000559822 LRRC26Q2I0M4 334 aa14.59□□□□□ -0.07
SPG11-219ENST00000559822 REPS2Q8NFH8 660 aa14.59□□□□□ -0.07
SPG11-219ENST00000559822 MKL1Q969V6 931 aa14.59□□□□□ -0.07
SPG11-219ENST00000559822 EVI5LQ96CN4 794 aa14.59□□□□□ -0.07
SPG11-219ENST00000559822 CEP95Q96GE4 821 aa14.59□□□□□ -0.07
SPG11-219ENST00000559822 CRBNQ96SW2 442 aa14.59□□□□□ -0.07
SPG11-219ENST00000559822 MTMR4Q9NYA4 1195 aa14.59□□□□□ -0.07
SPG11-219ENST00000559822 MYH4Q9Y623 1939 aa14.58□□□□□ -0.07
SPG11-219ENST00000559822 ATP2A1O14983 1001 aa14.58□□□□□ -0.08
SPG11-219ENST00000559822 FDX1P10109 184 aa14.58□□□□□ -0.08
SPG11-219ENST00000559822 PPARAQ07869 468 aa14.58□□□□□ -0.08
SPG11-219ENST00000559822 HDAC1Q13547 482 aaPredicted RBP14.58□□□□□ -0.08
SPG11-219ENST00000559822 SNRNP48Q6IEG0 339 aaKnown RBP14.58□□□□□ -0.08
SPG11-219ENST00000559822 TICAM2Q86XR7 235 aa14.58□□□□□ -0.08
SPG11-219ENST00000559822 MSL3Q8N5Y2 521 aaKnown RBP14.58□□□□□ -0.08
SPG11-219ENST00000559822 GMCL1P1Q8NEA9 526 aa14.58□□□□□ -0.08
SPG11-219ENST00000559822 NEDD1Q8NHV4 660 aa14.58□□□□□ -0.08
SPG11-219ENST00000559822 SEC62Q99442 399 aaKnown RBP14.58□□□□□ -0.08
SPG11-219ENST00000559822 NUP88Q99567 741 aaPredicted RBP14.58□□□□□ -0.08
SPG11-219ENST00000559822 PRKAG2Q9UGJ0 569 aa14.58□□□□□ -0.08
SPG11-219ENST00000559822 FEM1BQ9UK73 627 aa14.58□□□□□ -0.08
SPG11-219ENST00000559822 SALL3Q9BXA9 1300 aa14.58□□□□□ -0.08
SPG11-219ENST00000559822 RANBP2P49792 3224 aaKnown RBP14.57□□□□□ -0.08
SPG11-219ENST00000559822 ZNFX1Q9P2E3 1918 aaKnown RBP14.57□□□□□ -0.08
SPG11-219ENST00000559822 ZNF792Q3KQV3 632 aa14.57□□□□□ -0.08
SPG11-219ENST00000559822 TDHQ8IZJ6 230 aa14.57□□□□□ -0.08
SPG11-219ENST00000559822 TINF2Q9BSI4 451 aa14.57□□□□□ -0.08
SPG11-219ENST00000559822 UBE2OQ9C0C9 1292 aaKnown RBP14.57□□□□□ -0.08
SPG11-219ENST00000559822 CNPY2Q9Y2B0 182 aa14.57□□□□□ -0.08
SPG11-219ENST00000559822 PGK2P07205 417 aa14.56□□□□□ -0.08
SPG11-219ENST00000559822 RARBP10826 455 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms