RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 STAG2Q8N3U4 1231 aa12.85□□□□□ -0.35
CLPX-204ENST00000559152 PDILTQ8N807 584 aa12.85□□□□□ -0.35
CLPX-204ENST00000559152 IQUBQ8NA54 791 aa12.85□□□□□ -0.35
CLPX-204ENST00000559152 SLC44A5Q8NCS7 719 aa12.85□□□□□ -0.35
CLPX-204ENST00000559152 ENOX1Q8TC92 643 aaKnown RBP12.85□□□□□ -0.35
CLPX-204ENST00000559152 SYMPKQ92797 1274 aaKnown RBP12.85□□□□□ -0.35
CLPX-204ENST00000559152 SWAP70Q9UH65 585 aa12.85□□□□□ -0.35
CLPX-204ENST00000559152 KLRF2D3W0D1 207 aa12.84□□□□□ -0.35
CLPX-204ENST00000559152 LAD1O00515 517 aa12.84□□□□□ -0.35
CLPX-204ENST00000559152 RIMBP2O15034 1052 aa12.84□□□□□ -0.35
CLPX-204ENST00000559152 SERPINC1P01008 464 aa12.84□□□□□ -0.35
CLPX-204ENST00000559152 LMOD1P29536 600 aaPredicted RBP12.84□□□□□ -0.35
CLPX-204ENST00000559152 ZNF827Q17R98 1081 aa12.84□□□□□ -0.35
CLPX-204ENST00000559152 PPP4R3BQ5MIZ7 849 aa12.84□□□□□ -0.35
CLPX-204ENST00000559152 C17orf53Q8N3J3 647 aaPredicted RBP12.84□□□□□ -0.35
CLPX-204ENST00000559152 DHX58Q96C10 678 aa12.84□□□□□ -0.35
CLPX-204ENST00000559152 GSDMAQ96QA5 445 aa12.84□□□□□ -0.35
CLPX-204ENST00000559152 NRXN2Q9P2S2 1712 aa12.84□□□□□ -0.35
CLPX-204ENST00000559152 PLIN4Q96Q06 1357 aa12.84□□□□□ -0.35
CLPX-204ENST00000559152 MYO3BQ8WXR4 1341 aa12.84□□□□□ -0.35
CLPX-204ENST00000559152 UQCRHLA0A096LP55 91 aa12.84□□□□□ -0.35
CLPX-204ENST00000559152 VWA3AA6NCI4 1184 aa12.84□□□□□ -0.35
CLPX-204ENST00000559152 hCG_1984214I3L0E3 225 aa12.84□□□□□ -0.35
CLPX-204ENST00000559152 UQCRHP07919 91 aa12.84□□□□□ -0.35
CLPX-204ENST00000559152 SKILP12757 684 aa12.84□□□□□ -0.35
CLPX-204ENST00000559152 GNA11P29992 359 aa12.84□□□□□ -0.35
CLPX-204ENST00000559152 UBASH3AP57075 661 aa12.84□□□□□ -0.35
CLPX-204ENST00000559152 HHIPL2Q6UWX4 724 aa12.84□□□□□ -0.35
CLPX-204ENST00000559152 SH3RF1Q7Z6J0 888 aa12.84□□□□□ -0.35
CLPX-204ENST00000559152 ZNF713Q8N859 430 aaPredicted RBP12.84□□□□□ -0.35
CLPX-204ENST00000559152 RRP36Q96EU6 259 aaKnown RBP12.84□□□□□ -0.35
CLPX-204ENST00000559152 EPSTI1Q96J88 318 aa12.84□□□□□ -0.35
CLPX-204ENST00000559152 SEC63Q9UGP8 760 aaKnown RBP12.84□□□□□ -0.35
CLPX-204ENST00000559152 TTF2Q9UNY4 1162 aaKnown RBP12.84□□□□□ -0.35
CLPX-204ENST00000559152 GOLGB1Q14789 3259 aaKnown RBP12.83□□□□□ -0.35
CLPX-204ENST00000559152 SNED1Q8TER0 1413 aa12.83□□□□□ -0.36
CLPX-204ENST00000559152 DYNC1I1O14576 645 aa12.83□□□□□ -0.36
CLPX-204ENST00000559152 FOXN1O15353 648 aa12.83□□□□□ -0.36
CLPX-204ENST00000559152 MCM7P33993 719 aa12.83□□□□□ -0.36
CLPX-204ENST00000559152 WWC2Q6AWC2 1192 aa12.83□□□□□ -0.36
CLPX-204ENST00000559152 USP49Q70CQ1 688 aa12.83□□□□□ -0.36
CLPX-204ENST00000559152 HEATR3Q7Z4Q2 680 aa12.83□□□□□ -0.36
CLPX-204ENST00000559152 PODNQ7Z5L7 613 aa12.83□□□□□ -0.36
CLPX-204ENST00000559152 PAGE5Q96GU1 130 aa12.83□□□□□ -0.36
CLPX-204ENST00000559152 C6orf50Q9HD87 102 aa12.83□□□□□ -0.36
CLPX-204ENST00000559152 DDX60LQ5H9U9 1706 aaKnown RBP12.83□□□□□ -0.36
CLPX-204ENST00000559152 TNS1Q9HBL0 1735 aaKnown RBP12.83□□□□□ -0.36
CLPX-204ENST00000559152 M0R2N6 131 aa12.82□□□□□ -0.36
CLPX-204ENST00000559152 STXBP3O00186 592 aa12.82□□□□□ -0.36
CLPX-204ENST00000559152 MMP10P09238 476 aa12.82□□□□□ -0.36
CLPX-204ENST00000559152 SFPQP23246 707 aaKnown RBP eCLIP12.82□□□□□ -0.36
CLPX-204ENST00000559152 TMC6Q7Z403 805 aa12.82□□□□□ -0.36
CLPX-204ENST00000559152 MYRIPQ8NFW9 859 aa12.82□□□□□ -0.36
CLPX-204ENST00000559152 GPKOWQ92917 476 aaPredicted RBP eCLIP12.82□□□□□ -0.36
CLPX-204ENST00000559152 TEKT1Q969V4 418 aa12.82□□□□□ -0.36
CLPX-204ENST00000559152 MRIQ9BWK5 157 aa12.82□□□□□ -0.36
CLPX-204ENST00000559152 ZMYND12Q9H0C1 365 aa12.82□□□□□ -0.36
CLPX-204ENST00000559152 HSD3B7Q9H2F3 369 aa12.82□□□□□ -0.36
CLPX-204ENST00000559152 KCND1Q9NSA2 647 aa12.82□□□□□ -0.36
CLPX-204ENST00000559152 CYTH3O43739 400 aa12.82□□□□□ -0.36
CLPX-204ENST00000559152 PRR29P0C7W0 189 aa12.82□□□□□ -0.36
CLPX-204ENST00000559152 BMP6P22004 513 aa12.82□□□□□ -0.36
CLPX-204ENST00000559152 KCNJ6P48051 423 aa12.82□□□□□ -0.36
CLPX-204ENST00000559152 FKBP1AP62942 108 aaKnown RBP12.82□□□□□ -0.36
CLPX-204ENST00000559152 ORC2Q13416 577 aaPredicted RBP12.82□□□□□ -0.36
CLPX-204ENST00000559152 SOGA3Q5TF21 947 aa12.82□□□□□ -0.36
CLPX-204ENST00000559152 KRT25Q7Z3Z0 450 aa12.82□□□□□ -0.36
CLPX-204ENST00000559152 CEP95Q96GE4 821 aa12.82□□□□□ -0.36
CLPX-204ENST00000559152 FANCLQ9NW38 375 aa12.82□□□□□ -0.36
CLPX-204ENST00000559152 PCDHA6Q9UN73 950 aa12.82□□□□□ -0.36
CLPX-204ENST00000559152 PCDHA8Q9Y5H6 950 aa12.82□□□□□ -0.36
CLPX-204ENST00000559152 HLA-DOAP06340 250 aa12.81□□□□□ -0.36
CLPX-204ENST00000559152 GABPAQ06546 454 aa12.81□□□□□ -0.36
CLPX-204ENST00000559152 TPD52L1Q16890 204 aaPredicted RBP12.81□□□□□ -0.36
CLPX-204ENST00000559152 CFAP100Q494V2 611 aa12.81□□□□□ -0.36
CLPX-204ENST00000559152 ASPRV1Q53RT3 343 aa12.81□□□□□ -0.36
CLPX-204ENST00000559152 DTHD1Q6ZMT9 781 aa12.81□□□□□ -0.36
CLPX-204ENST00000559152 USP40Q9NVE5 1235 aa12.81□□□□□ -0.36
CLPX-204ENST00000559152 SERPINB13Q9UIV8 391 aa12.81□□□□□ -0.36
CLPX-204ENST00000559152 C10orf71Q711Q0 1435 aa12.81□□□□□ -0.36
CLPX-204ENST00000559152 VEGFAP15692 232 aaPredicted RBP12.81□□□□□ -0.36
CLPX-204ENST00000559152 CDK11BP21127 795 aaKnown RBP12.81□□□□□ -0.36
CLPX-204ENST00000559152 PRPHP41219 470 aa12.81□□□□□ -0.36
CLPX-204ENST00000559152 NAPAP54920 295 aa12.81□□□□□ -0.36
CLPX-204ENST00000559152 CCZ1BP86790 482 aa12.81□□□□□ -0.36
CLPX-204ENST00000559152 CCZ1P86791 482 aaPredicted RBP12.81□□□□□ -0.36
CLPX-204ENST00000559152 SEMA3FQ13275 785 aa12.81□□□□□ -0.36
CLPX-204ENST00000559152 PICALMQ13492 652 aa12.81□□□□□ -0.36
CLPX-204ENST00000559152 NOM1Q5C9Z4 860 aaKnown RBP12.81□□□□□ -0.36
CLPX-204ENST00000559152 STYK1Q6J9G0 422 aa12.81□□□□□ -0.36
CLPX-204ENST00000559152 CCDC112Q8NEF3 446 aa12.81□□□□□ -0.36
CLPX-204ENST00000559152 RMND1Q9NWS8 449 aa12.81□□□□□ -0.36
CLPX-204ENST00000559152 MTMR4Q9NYA4 1195 aa12.81□□□□□ -0.36
CLPX-204ENST00000559152 PAXBP1Q9Y5B6 917 aa12.81□□□□□ -0.36
CLPX-204ENST00000559152 ESYT2A0FGR8 921 aa12.8□□□□□ -0.36
CLPX-204ENST00000559152 H0YIN7 160 aa12.8□□□□□ -0.36
CLPX-204ENST00000559152 WNT7AO00755 349 aa12.8□□□□□ -0.36
CLPX-204ENST00000559152 ATP1A3P13637 1013 aa12.8□□□□□ -0.36
CLPX-204ENST00000559152 DPYDQ12882 1025 aa12.8□□□□□ -0.36
CLPX-204ENST00000559152 C4orf32Q8N8J7 132 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms