RNA–Protein interactions for RNA: ENST00000559035.5

HMG20A-207, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-207ENST00000559035 MIGA1Q8NAN2 632 aa9.15□□□□□ -0.94
HMG20A-207ENST00000559035 SLC44A5Q8NCS7 719 aa9.15□□□□□ -0.94
HMG20A-207ENST00000559035 KLHDC9Q8NEP7 349 aa9.15□□□□□ -0.94
HMG20A-207ENST00000559035 CDCA7LQ96GN5 454 aa9.15□□□□□ -0.94
HMG20A-207ENST00000559035 GAS2L1Q99501 681 aaPredicted RBP9.15□□□□□ -0.94
HMG20A-207ENST00000559035 TSEN34Q9BSV6 310 aaKnown RBP9.15□□□□□ -0.94
HMG20A-207ENST00000559035 TMEM39AQ9NV64 488 aa9.15□□□□□ -0.94
HMG20A-207ENST00000559035 SLC5A4Q9NY91 659 aa9.15□□□□□ -0.94
HMG20A-207ENST00000559035 HOXC10Q9NYD6 342 aa9.15□□□□□ -0.94
HMG20A-207ENST00000559035 TLR7Q9NYK1 1049 aaKnown RBP9.15□□□□□ -0.94
HMG20A-207ENST00000559035 DBNLQ9UJU6 430 aaKnown RBP9.15□□□□□ -0.94
HMG20A-207ENST00000559035 ADAMTS5Q9UNA0 930 aa9.15□□□□□ -0.94
HMG20A-207ENST00000559035 ARIH1Q9Y4X5 557 aaPredicted RBP9.15□□□□□ -0.94
HMG20A-207ENST00000559035 MYH8P13535 1937 aa9.14□□□□□ -0.95
HMG20A-207ENST00000559035 MOXD2PA6NHM9 499 aa9.14□□□□□ -0.95
HMG20A-207ENST00000559035 MYCNP04198 464 aaPredicted RBP9.14□□□□□ -0.95
HMG20A-207ENST00000559035 AKR1A1P14550 325 aa9.14□□□□□ -0.95
HMG20A-207ENST00000559035 CDK7P50613 346 aa9.14□□□□□ -0.95
HMG20A-207ENST00000559035 ACLYP53396 1101 aa9.14□□□□□ -0.95
HMG20A-207ENST00000559035 TMED8Q6PL24 325 aaPredicted RBP9.14□□□□□ -0.95
HMG20A-207ENST00000559035 TTC6Q86TZ1 520 aa9.14□□□□□ -0.95
HMG20A-207ENST00000559035 SIAH1Q8IUQ4 282 aa9.14□□□□□ -0.95
HMG20A-207ENST00000559035 REPS2Q8NFH8 660 aa9.14□□□□□ -0.95
HMG20A-207ENST00000559035 ARHGAP45Q92619 1136 aa9.14□□□□□ -0.95
HMG20A-207ENST00000559035 TINF2Q9BSI4 451 aa9.14□□□□□ -0.95
HMG20A-207ENST00000559035 TANGO6Q9C0B7 1094 aa9.14□□□□□ -0.95
HMG20A-207ENST00000559035 CXXC1Q9P0U4 656 aaPredicted RBP9.14□□□□□ -0.95
HMG20A-207ENST00000559035 ZNF214Q9UL59 606 aaPredicted RBP9.14□□□□□ -0.95
HMG20A-207ENST00000559035 DIS3Q9Y2L1 958 aaKnown RBP9.14□□□□□ -0.95
HMG20A-207ENST00000559035 BRWD1Q9NSI6 2320 aa9.14□□□□□ -0.95
HMG20A-207ENST00000559035 MYADML2A6NDP7 307 aa9.13□□□□□ -0.95
HMG20A-207ENST00000559035 ADCY6O43306 1168 aa9.13□□□□□ -0.95
HMG20A-207ENST00000559035 ANP32CO43423 234 aa9.13□□□□□ -0.95
HMG20A-207ENST00000559035 SLC25A27O95847 323 aa9.13□□□□□ -0.95
HMG20A-207ENST00000559035 FCER1AP12319 257 aa9.13□□□□□ -0.95
HMG20A-207ENST00000559035 BMP1P13497 986 aa9.13□□□□□ -0.95
HMG20A-207ENST00000559035 USP5P45974 858 aa9.13□□□□□ -0.95
HMG20A-207ENST00000559035 RARSP54136 660 aaKnown RBP9.13□□□□□ -0.95
HMG20A-207ENST00000559035 PPIGQ13427 754 aaKnown RBP eCLIP9.13□□□□□ -0.95
HMG20A-207ENST00000559035 CCDC158Q5M9N0 1113 aa9.13□□□□□ -0.95
HMG20A-207ENST00000559035 PSRC1Q6PGN9 363 aaPredicted RBP9.13□□□□□ -0.95
HMG20A-207ENST00000559035 NCAPG2Q86XI2 1143 aa9.13□□□□□ -0.95
HMG20A-207ENST00000559035 CLEC10AQ8IUN9 316 aa9.13□□□□□ -0.95
HMG20A-207ENST00000559035 FAM126BQ8IXS8 530 aa9.13□□□□□ -0.95
HMG20A-207ENST00000559035 NECAB3Q96P71 396 aaPredicted RBP9.13□□□□□ -0.95
HMG20A-207ENST00000559035 CABP5Q9NP86 173 aa9.13□□□□□ -0.95
HMG20A-207ENST00000559035 STARD7Q9NQZ5 370 aa9.13□□□□□ -0.95
HMG20A-207ENST00000559035 TMX2Q9Y320 296 aa9.13□□□□□ -0.95
HMG20A-207ENST00000559035 PRRC2BQ5JSZ5 2229 aaKnown RBP9.12□□□□□ -0.95
HMG20A-207ENST00000559035 ELP1O95163 1332 aa9.12□□□□□ -0.95
HMG20A-207ENST00000559035 MROH7Q68CQ1 1323 aa9.12□□□□□ -0.95
HMG20A-207ENST00000559035 DCDC2CA8MYV0 355 aa9.12□□□□□ -0.95
HMG20A-207ENST00000559035 WDR46O15213 610 aaKnown RBP9.12□□□□□ -0.95
HMG20A-207ENST00000559035 IDH1O75874 414 aaKnown RBP9.12□□□□□ -0.95
HMG20A-207ENST00000559035 FLOT1O75955 427 aa9.12□□□□□ -0.95
HMG20A-207ENST00000559035 GNAI2P04899 355 aa9.12□□□□□ -0.95
HMG20A-207ENST00000559035 PGK2P07205 417 aa9.12□□□□□ -0.95
HMG20A-207ENST00000559035 CSF2RAP15509 400 aa9.12□□□□□ -0.95
HMG20A-207ENST00000559035 IRX5P78411 483 aaPredicted RBP9.12□□□□□ -0.95
HMG20A-207ENST00000559035 G3BP1Q13283 466 aaKnown RBP eCLIP9.12□□□□□ -0.95
HMG20A-207ENST00000559035 RAB30Q15771 203 aa9.12□□□□□ -0.95
HMG20A-207ENST00000559035 TMEM179Q6ZVK1 233 aa9.12□□□□□ -0.95
HMG20A-207ENST00000559035 RIOX2Q8IUF8 465 aa9.12□□□□□ -0.95
HMG20A-207ENST00000559035 MSL3Q8N5Y2 521 aaKnown RBP9.12□□□□□ -0.95
HMG20A-207ENST00000559035 MAGEB6Q8N7X4 407 aa9.12□□□□□ -0.95
HMG20A-207ENST00000559035 SSH3Q8TE77 659 aa9.12□□□□□ -0.95
HMG20A-207ENST00000559035 PPM1EQ8WY54 764 aa9.12□□□□□ -0.95
HMG20A-207ENST00000559035 HERVK_113Q902F9 699 aa9.12□□□□□ -0.95
HMG20A-207ENST00000559035 VWCEQ96DN2 955 aa9.12□□□□□ -0.95
HMG20A-207ENST00000559035 MMP19Q99542 508 aa9.12□□□□□ -0.95
HMG20A-207ENST00000559035 C1QTNF1Q9BXJ1 281 aa9.12□□□□□ -0.95
HMG20A-207ENST00000559035 UPF3AQ9H1J1 476 aaKnown RBP9.12□□□□□ -0.95
HMG20A-207ENST00000559035 ANTXR1Q9H6X2 564 aa9.12□□□□□ -0.95
HMG20A-207ENST00000559035 VCPKMTQ9H867 229 aa9.12□□□□□ -0.95
HMG20A-207ENST00000559035 TNNQ9UQP3 1299 aa9.12□□□□□ -0.95
HMG20A-207ENST00000559035 YBX2Q9Y2T7 364 aaKnown RBP9.12□□□□□ -0.95
HMG20A-207ENST00000559035 WDFY4Q6ZS81 3184 aa9.11□□□□□ -0.95
HMG20A-207ENST00000559035 COL4A4P53420 1690 aaPredicted RBP9.11□□□□□ -0.95
HMG20A-207ENST00000559035 DNAJC25-GNG10A0A024R161 153 aa9.11□□□□□ -0.95
HMG20A-207ENST00000559035 CTAGE5O15320 804 aa9.11□□□□□ -0.95
HMG20A-207ENST00000559035 CD4P01730 458 aa9.11□□□□□ -0.95
HMG20A-207ENST00000559035 TRIM27P14373 513 aa9.11□□□□□ -0.95
HMG20A-207ENST00000559035 NKX3-2P78367 333 aa9.11□□□□□ -0.95
HMG20A-207ENST00000559035 CCDC174Q6PII3 467 aa9.11□□□□□ -0.95
HMG20A-207ENST00000559035 MAMDC4Q6UXC1 1216 aa9.11□□□□□ -0.95
HMG20A-207ENST00000559035 ZNF365Q70YC5 407 aa9.11□□□□□ -0.95
HMG20A-207ENST00000559035 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.11□□□□□ -0.95
HMG20A-207ENST00000559035 NUP133Q8WUM0 1156 aa9.11□□□□□ -0.95
HMG20A-207ENST00000559035 FGD4Q96M96 766 aa9.11□□□□□ -0.95
HMG20A-207ENST00000559035 FBXO28Q9NVF7 368 aa9.11□□□□□ -0.95
HMG20A-207ENST00000559035 NOP58Q9Y2X3 529 aaKnown RBP9.11□□□□□ -0.95
HMG20A-207ENST00000559035 MCM3APO60318 1980 aa9.11□□□□□ -0.95
HMG20A-207ENST00000559035 TCF20Q9UGU0 1960 aaKnown RBP9.1□□□□□ -0.95
HMG20A-207ENST00000559035 VWA5AO00534 786 aa9.1□□□□□ -0.95
HMG20A-207ENST00000559035 DUSP11O75319 330 aaKnown RBP9.1□□□□□ -0.95
HMG20A-207ENST00000559035 SNAI1O95863 264 aaPredicted RBP9.1□□□□□ -0.95
HMG20A-207ENST00000559035 ACRP10323 421 aa9.1□□□□□ -0.95
HMG20A-207ENST00000559035 CYP2D6P10635 497 aa9.1□□□□□ -0.95
HMG20A-207ENST00000559035 AKR1B1P15121 316 aa9.1□□□□□ -0.95
HMG20A-207ENST00000559035 COPB2P35606 906 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms