RNA–Protein interactions for RNA: ENST00000558845.1

HMG20A-206, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 644 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-206ENST00000558845 FAM184AQ8NB25 1140 aa13.01□□□□□ -0.33
HMG20A-206ENST00000558845 WASF1Q92558 559 aa13.01□□□□□ -0.33
HMG20A-206ENST00000558845 ORC3Q9UBD5 711 aaPredicted RBP13.01□□□□□ -0.33
HMG20A-206ENST00000558845 CLIP2Q9UDT6 1046 aa13.01□□□□□ -0.33
HMG20A-206ENST00000558845 MAD2L2Q9UI95 211 aa13.01□□□□□ -0.33
HMG20A-206ENST00000558845 CNTNAP5Q8WYK1 1306 aa13□□□□□ -0.33
HMG20A-206ENST00000558845 PRPF3O43395 683 aaKnown RBP13□□□□□ -0.33
HMG20A-206ENST00000558845 GDF11O95390 407 aa13□□□□□ -0.33
HMG20A-206ENST00000558845 DEXIO95424 95 aa13□□□□□ -0.33
HMG20A-206ENST00000558845 SSRP1Q08945 709 aaKnown RBP13□□□□□ -0.33
HMG20A-206ENST00000558845 GPATCH4Q5T3I0 446 aaKnown RBP13□□□□□ -0.33
HMG20A-206ENST00000558845 LARP1BQ659C4 914 aaKnown RBP13□□□□□ -0.33
HMG20A-206ENST00000558845 MIGA2Q7L4E1 593 aa13□□□□□ -0.33
HMG20A-206ENST00000558845 RAB11FIP4Q86YS3 637 aa13□□□□□ -0.33
HMG20A-206ENST00000558845 DCAF4Q8WV16 495 aa13□□□□□ -0.33
HMG20A-206ENST00000558845 KLRG1Q96E93 195 aa13□□□□□ -0.33
HMG20A-206ENST00000558845 GMCL1Q96IK5 515 aa13□□□□□ -0.33
HMG20A-206ENST00000558845 SPZ1Q9BXG8 430 aa13□□□□□ -0.33
HMG20A-206ENST00000558845 SH2D4AQ9H788 454 aa13□□□□□ -0.33
HMG20A-206ENST00000558845 ARHGEF10LQ9HCE6 1279 aa13□□□□□ -0.33
HMG20A-206ENST00000558845 MTMR6Q9Y217 621 aa13□□□□□ -0.33
HMG20A-206ENST00000558845 TMX2Q9Y320 296 aa13□□□□□ -0.33
HMG20A-206ENST00000558845 ZDHHC9Q9Y397 364 aa13□□□□□ -0.33
HMG20A-206ENST00000558845 MYH4Q9Y623 1939 aa13□□□□□ -0.33
HMG20A-206ENST00000558845 PAPPA2Q9BXP8 1791 aa12.99□□□□□ -0.33
HMG20A-206ENST00000558845 PARP1P09874 1014 aaKnown RBP12.99□□□□□ -0.33
HMG20A-206ENST00000558845 ZSCAN22P10073 491 aaPredicted RBP12.99□□□□□ -0.33
HMG20A-206ENST00000558845 VEGFAP15692 232 aaPredicted RBP12.99□□□□□ -0.33
HMG20A-206ENST00000558845 ZNF543Q08ER8 600 aa12.99□□□□□ -0.33
HMG20A-206ENST00000558845 MAP3K11Q16584 847 aa12.99□□□□□ -0.33
HMG20A-206ENST00000558845 CDC37L1Q7L3B6 337 aa12.99□□□□□ -0.33
HMG20A-206ENST00000558845 KRT26Q7Z3Y9 468 aa12.99□□□□□ -0.33
HMG20A-206ENST00000558845 USP48Q86UV5 1035 aa12.99□□□□□ -0.33
HMG20A-206ENST00000558845 CCDC144CPQ8IYA2 1237 aa12.99□□□□□ -0.33
HMG20A-206ENST00000558845 SCYL3Q8IZE3 742 aa12.99□□□□□ -0.33
HMG20A-206ENST00000558845 DOCK1Q14185 1865 aa12.99□□□□□ -0.33
HMG20A-206ENST00000558845 ATAD5Q96QE3 1844 aa12.98□□□□□ -0.33
HMG20A-206ENST00000558845 UNCXA6NJT0 531 aa12.98□□□□□ -0.33
HMG20A-206ENST00000558845 PLEKHA8P1O95397 391 aa12.98□□□□□ -0.33
HMG20A-206ENST00000558845 PKP1Q13835 747 aa12.98□□□□□ -0.33
HMG20A-206ENST00000558845 SHROOM1Q2M3G4 852 aaPredicted RBP12.98□□□□□ -0.33
HMG20A-206ENST00000558845 CLEC10AQ8IUN9 316 aa12.98□□□□□ -0.33
HMG20A-206ENST00000558845 LRRC47Q8N1G4 583 aaKnown RBP12.98□□□□□ -0.33
HMG20A-206ENST00000558845 SRBD1Q8N5C6 995 aaKnown RBP12.98□□□□□ -0.33
HMG20A-206ENST00000558845 FBXO18Q8NFZ0 1043 aa12.98□□□□□ -0.33
HMG20A-206ENST00000558845 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.98□□□□□ -0.33
HMG20A-206ENST00000558845 DDX11Q96FC9 970 aa12.98□□□□□ -0.33
HMG20A-206ENST00000558845 WDR18Q9BV38 432 aa12.98□□□□□ -0.33
HMG20A-206ENST00000558845 OCEL1Q9H607 264 aa12.98□□□□□ -0.33
HMG20A-206ENST00000558845 RIOX1Q9H6W3 641 aa12.98□□□□□ -0.33
HMG20A-206ENST00000558845 POLR2AP24928 1970 aaKnown RBP12.98□□□□□ -0.33
HMG20A-206ENST00000558845 A0A1W2PRG0 241 aa12.97□□□□□ -0.33
HMG20A-206ENST00000558845 KLRF2D3W0D1 207 aa12.97□□□□□ -0.33
HMG20A-206ENST00000558845 PLA2G6O60733 806 aa12.97□□□□□ -0.33
HMG20A-206ENST00000558845 F13A1P00488 732 aa12.97□□□□□ -0.33
HMG20A-206ENST00000558845 PYGBP11216 843 aa12.97□□□□□ -0.33
HMG20A-206ENST00000558845 PKN1Q16512 942 aa12.97□□□□□ -0.33
HMG20A-206ENST00000558845 STAG2Q8N3U4 1231 aa12.97□□□□□ -0.33
HMG20A-206ENST00000558845 TNPO1Q92973 898 aaKnown RBP12.97□□□□□ -0.33
HMG20A-206ENST00000558845 PHKBQ93100 1093 aa12.97□□□□□ -0.33
HMG20A-206ENST00000558845 SLC26A6Q9BXS9 759 aa12.97□□□□□ -0.33
HMG20A-206ENST00000558845 SCAF8Q9UPN6 1271 aaKnown RBP12.97□□□□□ -0.33
HMG20A-206ENST00000558845 ATP6V1DQ9Y5K8 247 aa12.97□□□□□ -0.33
HMG20A-206ENST00000558845 USP17L5A8MUK1 530 aa12.96□□□□□ -0.33
HMG20A-206ENST00000558845 ADM5C9JUS6 153 aa12.96□□□□□ -0.33
HMG20A-206ENST00000558845 F5H6K3 240 aa12.96□□□□□ -0.33
HMG20A-206ENST00000558845 hCG_1984214I3L0E3 225 aa12.96□□□□□ -0.33
HMG20A-206ENST00000558845 CYTH3O43739 400 aa12.96□□□□□ -0.33
HMG20A-206ENST00000558845 PPP1R12BO60237 982 aaPredicted RBP12.96□□□□□ -0.33
HMG20A-206ENST00000558845 USP2O75604 605 aaPredicted RBP12.96□□□□□ -0.33
HMG20A-206ENST00000558845 NDUFB10O96000 172 aa12.96□□□□□ -0.33
HMG20A-206ENST00000558845 INPP5BP32019 993 aa12.96□□□□□ -0.33
HMG20A-206ENST00000558845 NF2P35240 595 aa12.96□□□□□ -0.33
HMG20A-206ENST00000558845 AKAP17AQ02040 695 aaKnown RBP12.96□□□□□ -0.33
HMG20A-206ENST00000558845 KLRC3Q07444 240 aa12.96□□□□□ -0.33
HMG20A-206ENST00000558845 PFKFB3Q16875 520 aaPredicted RBP12.96□□□□□ -0.33
HMG20A-206ENST00000558845 SLFN13Q68D06 897 aa12.96□□□□□ -0.33
HMG20A-206ENST00000558845 USP17L2Q6R6M4 530 aa12.96□□□□□ -0.33
HMG20A-206ENST00000558845 BTNL9Q6UXG8 535 aa12.96□□□□□ -0.33
HMG20A-206ENST00000558845 LDHDQ86WU2 507 aa12.96□□□□□ -0.33
HMG20A-206ENST00000558845 ZNF713Q8N859 430 aaPredicted RBP12.96□□□□□ -0.33
HMG20A-206ENST00000558845 LPAR1Q92633 364 aa12.96□□□□□ -0.33
HMG20A-206ENST00000558845 MTMR8Q96EF0 704 aa12.96□□□□□ -0.33
HMG20A-206ENST00000558845 CDCA5Q96FF9 252 aa12.96□□□□□ -0.33
HMG20A-206ENST00000558845 C8orf76Q96K31 380 aa12.96□□□□□ -0.33
HMG20A-206ENST00000558845 WRNIP1Q96S55 665 aa12.96□□□□□ -0.33
HMG20A-206ENST00000558845 ALG1Q9BT22 464 aa12.96□□□□□ -0.33
HMG20A-206ENST00000558845 KIAA1683Q9H0B3 1180 aa12.96□□□□□ -0.33
HMG20A-206ENST00000558845 ZSCAN16Q9H4T2 348 aaPredicted RBP12.96□□□□□ -0.33
HMG20A-206ENST00000558845 VCPKMTQ9H867 229 aa12.96□□□□□ -0.33
HMG20A-206ENST00000558845 AS3MTQ9HBK9 375 aa12.96□□□□□ -0.33
HMG20A-206ENST00000558845 GOPCQ9HD26 462 aa12.96□□□□□ -0.33
HMG20A-206ENST00000558845 SH3GLB2Q9NR46 395 aa12.96□□□□□ -0.33
HMG20A-206ENST00000558845 H3BQV1 296 aa12.95□□□□□ -0.34
HMG20A-206ENST00000558845 XBP1P17861 261 aa12.95□□□□□ -0.34
HMG20A-206ENST00000558845 SLC35G1Q2M3R5 365 aa12.95□□□□□ -0.34
HMG20A-206ENST00000558845 IFFO2Q5TF58 517 aa12.95□□□□□ -0.34
HMG20A-206ENST00000558845 V9GY48 417 aaPredicted RBP12.95□□□□□ -0.34
HMG20A-206ENST00000558845 SCG2P13521 617 aa12.94□□□□□ -0.34
HMG20A-206ENST00000558845 PTPRAP18433 802 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms