RNA–Protein interactions for RNA: ENST00000558806.5

AP3S2-206, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 1 (best)

Gene AP3S2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-206ENST00000558806 CTR9Q6PD62 1173 aa12.86□□□□□ -0.35
AP3S2-206ENST00000558806 SAMD1Q6SPF0 538 aaPredicted RBP12.86□□□□□ -0.35
AP3S2-206ENST00000558806 SLC39A5Q6ZMH5 540 aa12.86□□□□□ -0.35
AP3S2-206ENST00000558806 ARPP21Q9UBL0 812 aaPredicted RBP12.86□□□□□ -0.35
AP3S2-206ENST00000558806 NRBP1Q9UHY1 535 aa12.86□□□□□ -0.35
AP3S2-206ENST00000558806 ADAMTS5Q9UNA0 930 aa12.86□□□□□ -0.35
AP3S2-206ENST00000558806 ATP11BQ9Y2G3 1177 aa12.86□□□□□ -0.35
AP3S2-206ENST00000558806 COPB2P35606 906 aa12.85□□□□□ -0.35
AP3S2-206ENST00000558806 ANO1Q5XXA6 986 aa12.85□□□□□ -0.35
AP3S2-206ENST00000558806 RIOX2Q8IUF8 465 aa12.85□□□□□ -0.35
AP3S2-206ENST00000558806 MMP19Q99542 508 aa12.85□□□□□ -0.35
AP3S2-206ENST00000558806 PUS7LQ9H0K6 701 aaKnown RBP12.85□□□□□ -0.35
AP3S2-206ENST00000558806 BAZ2AQ9UIF9 1905 aaKnown RBP12.85□□□□□ -0.35
AP3S2-206ENST00000558806 DNAH12Q6ZR08 3092 aa12.84□□□□□ -0.35
AP3S2-206ENST00000558806 PARP14Q460N5 1801 aa12.84□□□□□ -0.35
AP3S2-206ENST00000558806 SMIM22K7EJ46 135 aa12.84□□□□□ -0.35
AP3S2-206ENST00000558806 MYCNP04198 464 aaPredicted RBP12.84□□□□□ -0.35
AP3S2-206ENST00000558806 CHGBP05060 677 aa12.84□□□□□ -0.35
AP3S2-206ENST00000558806 KCTD2Q14681 263 aa12.84□□□□□ -0.35
AP3S2-206ENST00000558806 SNX17Q15036 470 aa12.84□□□□□ -0.35
AP3S2-206ENST00000558806 LRRC41Q15345 812 aa12.84□□□□□ -0.35
AP3S2-206ENST00000558806 PRAMEF19Q5SWL8 479 aa12.84□□□□□ -0.35
AP3S2-206ENST00000558806 C1orf53Q5VUE5 145 aa12.84□□□□□ -0.35
AP3S2-206ENST00000558806 FAM109BQ6ICB4 259 aaPredicted RBP12.84□□□□□ -0.35
AP3S2-206ENST00000558806 FBXO28Q9NVF7 368 aa12.84□□□□□ -0.35
AP3S2-206ENST00000558806 RCAN3Q9UKA8 241 aa12.84□□□□□ -0.35
AP3S2-206ENST00000558806 PPP1R9AQ9ULJ8 1098 aa12.84□□□□□ -0.35
AP3S2-206ENST00000558806 DIS3Q9Y2L1 958 aaKnown RBP12.84□□□□□ -0.35
AP3S2-206ENST00000558806 POTEB2H3BUK9 544 aa12.83□□□□□ -0.36
AP3S2-206ENST00000558806 VWA5AO00534 786 aa12.83□□□□□ -0.36
AP3S2-206ENST00000558806 RAD21O60216 631 aa12.83□□□□□ -0.36
AP3S2-206ENST00000558806 RARBP10826 455 aa12.83□□□□□ -0.36
AP3S2-206ENST00000558806 STAT3P40763 770 aa12.83□□□□□ -0.36
AP3S2-206ENST00000558806 ADCYAP1R1P41586 468 aa12.83□□□□□ -0.36
AP3S2-206ENST00000558806 SBK1Q52WX2 424 aa12.83□□□□□ -0.36
AP3S2-206ENST00000558806 FAM47AQ5JRC9 791 aa12.83□□□□□ -0.36
AP3S2-206ENST00000558806 GIMAP6Q6P9H5 292 aa12.83□□□□□ -0.36
AP3S2-206ENST00000558806 STRBPQ96SI9 672 aaKnown RBP12.83□□□□□ -0.36
AP3S2-206ENST00000558806 TINF2Q9BSI4 451 aa12.83□□□□□ -0.36
AP3S2-206ENST00000558806 XPNPEP3Q9NQH7 507 aa12.83□□□□□ -0.36
AP3S2-206ENST00000558806 PRDM5Q9NQX1 630 aaPredicted RBP12.83□□□□□ -0.36
AP3S2-206ENST00000558806 ECHDC1Q9NTX5 307 aa12.83□□□□□ -0.36
AP3S2-206ENST00000558806 ZNF214Q9UL59 606 aaPredicted RBP12.83□□□□□ -0.36
AP3S2-206ENST00000558806 MYH7P12883 1935 aa12.83□□□□□ -0.36
AP3S2-206ENST00000558806 LTBP2Q14767 1821 aa12.83□□□□□ -0.36
AP3S2-206ENST00000558806 ROBO3Q96MS0 1386 aa12.82□□□□□ -0.36
AP3S2-206ENST00000558806 SMARCA5O60264 1052 aaPredicted RBP12.82□□□□□ -0.36
AP3S2-206ENST00000558806 PGK2P07205 417 aa12.82□□□□□ -0.36
AP3S2-206ENST00000558806 ZNF792Q3KQV3 632 aa12.82□□□□□ -0.36
AP3S2-206ENST00000558806 TRIM60Q495X7 471 aa12.82□□□□□ -0.36
AP3S2-206ENST00000558806 FAM83BQ5T0W9 1011 aa12.82□□□□□ -0.36
AP3S2-206ENST00000558806 RNF180Q86T96 592 aa12.82□□□□□ -0.36
AP3S2-206ENST00000558806 GPATCH3Q96I76 525 aa12.82□□□□□ -0.36
AP3S2-206ENST00000558806 MKNK2Q9HBH9 465 aa12.82□□□□□ -0.36
AP3S2-206ENST00000558806 COL11A1P12107 1806 aaPredicted RBP12.81□□□□□ -0.36
AP3S2-206ENST00000558806 AKR1A1P14550 325 aa12.81□□□□□ -0.36
AP3S2-206ENST00000558806 MSL3Q8N5Y2 521 aaKnown RBP12.81□□□□□ -0.36
AP3S2-206ENST00000558806 KBTBD3Q8NAB2 608 aa12.81□□□□□ -0.36
AP3S2-206ENST00000558806 REPS2Q8NFH8 660 aa12.81□□□□□ -0.36
AP3S2-206ENST00000558806 APPBP2Q92624 585 aa12.81□□□□□ -0.36
AP3S2-206ENST00000558806 FERMT2Q96AC1 680 aa12.81□□□□□ -0.36
AP3S2-206ENST00000558806 SLF1Q9BQI6 1058 aa12.81□□□□□ -0.36
AP3S2-206ENST00000558806 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.81□□□□□ -0.36
AP3S2-206ENST00000558806 TEX13BQ9BXU2 312 aa12.81□□□□□ -0.36
AP3S2-206ENST00000558806 ZNF287Q9HBT7 754 aa12.81□□□□□ -0.36
AP3S2-206ENST00000558806 PDLIM7Q9NR12 457 aa12.81□□□□□ -0.36
AP3S2-206ENST00000558806 NYAP2Q9P242 653 aa12.81□□□□□ -0.36
AP3S2-206ENST00000558806 PHF24Q9UPV7 400 aa12.81□□□□□ -0.36
AP3S2-206ENST00000558806 CNPY2Q9Y2B0 182 aa12.81□□□□□ -0.36
AP3S2-206ENST00000558806 GSG1L2A8MUP6 293 aa12.8□□□□□ -0.36
AP3S2-206ENST00000558806 MINDY4BA8MYZ0 360 aa12.8□□□□□ -0.36
AP3S2-206ENST00000558806 F5H6K3 240 aa12.8□□□□□ -0.36
AP3S2-206ENST00000558806 ZFYP08048 801 aaPredicted RBP12.8□□□□□ -0.36
AP3S2-206ENST00000558806 ZNF865P0CJ78 1059 aaPredicted RBP12.8□□□□□ -0.36
AP3S2-206ENST00000558806 GNAT2P19087 354 aa12.8□□□□□ -0.36
AP3S2-206ENST00000558806 RASA1P20936 1047 aa12.8□□□□□ -0.36
AP3S2-206ENST00000558806 KLRC3Q07444 240 aa12.8□□□□□ -0.36
AP3S2-206ENST00000558806 ZNF697Q5TEC3 545 aa12.8□□□□□ -0.36
AP3S2-206ENST00000558806 PRPF38AQ8NAV1 312 aaKnown RBP12.8□□□□□ -0.36
AP3S2-206ENST00000558806 BADQ92934 168 aa12.8□□□□□ -0.36
AP3S2-206ENST00000558806 TACC3Q9Y6A5 838 aa12.8□□□□□ -0.36
AP3S2-206ENST00000558806 GREB1LQ9C091 1923 aaPredicted RBP12.8□□□□□ -0.36
AP3S2-206ENST00000558806 ATP2A1O14983 1001 aa12.79□□□□□ -0.36
AP3S2-206ENST00000558806 NDUFB10O96000 172 aa12.79□□□□□ -0.36
AP3S2-206ENST00000558806 PGK1P00558 417 aa12.79□□□□□ -0.36
AP3S2-206ENST00000558806 TDO2P48775 406 aa12.79□□□□□ -0.36
AP3S2-206ENST00000558806 TLE2Q04725 743 aa12.79□□□□□ -0.36
AP3S2-206ENST00000558806 SHHQ15465 462 aa12.79□□□□□ -0.36
AP3S2-206ENST00000558806 LRRFIP1Q32MZ4 808 aaKnown RBP12.79□□□□□ -0.36
AP3S2-206ENST00000558806 SNRNP48Q6IEG0 339 aaKnown RBP12.79□□□□□ -0.36
AP3S2-206ENST00000558806 STK11IPQ8N1F8 1099 aa12.79□□□□□ -0.36
AP3S2-206ENST00000558806 OSBP2Q969R2 916 aa12.79□□□□□ -0.36
AP3S2-206ENST00000558806 DDX11Q96FC9 970 aa12.79□□□□□ -0.36
AP3S2-206ENST00000558806 GUCD1Q96NT3 240 aa12.79□□□□□ -0.36
AP3S2-206ENST00000558806 SYNPO2Q9UMS6 1093 aa12.79□□□□□ -0.36
AP3S2-206ENST00000558806 SYNGAP1Q96PV0 1343 aa12.79□□□□□ -0.36
AP3S2-206ENST00000558806 ZNFX1Q9P2E3 1918 aaKnown RBP12.78□□□□□ -0.36
AP3S2-206ENST00000558806 A0A1W2PQ45 241 aaPredicted RBP12.78□□□□□ -0.36
AP3S2-206ENST00000558806 A0A1W2PQY0 241 aa12.78□□□□□ -0.36
AP3S2-206ENST00000558806 TRIM43BA6NCK2 446 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms