RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 GJA8P48165 433 aa12.14□□□□□ -0.47
TPM1-212ENST00000558347 CCDC129Q6ZRS4 1044 aa12.14□□□□□ -0.47
TPM1-212ENST00000558347 TRIB2Q92519 343 aa12.14□□□□□ -0.47
TPM1-212ENST00000558347 USP6NLQ92738 828 aa12.14□□□□□ -0.47
TPM1-212ENST00000558347 NUDT12Q9BQG2 462 aa12.14□□□□□ -0.47
TPM1-212ENST00000558347 TANGO6Q9C0B7 1094 aa12.14□□□□□ -0.47
TPM1-212ENST00000558347 KANSL2Q9H9L4 492 aa12.14□□□□□ -0.47
TPM1-212ENST00000558347 PRDM1O75626 825 aa12.13□□□□□ -0.47
TPM1-212ENST00000558347 HMGCRP04035 888 aa12.13□□□□□ -0.47
TPM1-212ENST00000558347 MRE11P49959 708 aa12.13□□□□□ -0.47
TPM1-212ENST00000558347 ATP2B2Q01814 1243 aa12.13□□□□□ -0.47
TPM1-212ENST00000558347 NMIQ13287 307 aaPredicted RBP12.13□□□□□ -0.47
TPM1-212ENST00000558347 COG2Q14746 738 aa12.13□□□□□ -0.47
TPM1-212ENST00000558347 MORN1Q5T089 497 aa12.13□□□□□ -0.47
TPM1-212ENST00000558347 CWC27Q6UX04 472 aaKnown RBP12.13□□□□□ -0.47
TPM1-212ENST00000558347 PLEKHH3Q7Z736 793 aa12.13□□□□□ -0.47
TPM1-212ENST00000558347 NKX2-3Q8TAU0 364 aa12.13□□□□□ -0.47
TPM1-212ENST00000558347 U2AF1L4Q8WU68 220 aaKnown RBP12.13□□□□□ -0.47
TPM1-212ENST00000558347 SOCS4Q8WXH5 440 aa12.13□□□□□ -0.47
TPM1-212ENST00000558347 LPAR1Q92633 364 aa12.13□□□□□ -0.47
TPM1-212ENST00000558347 SH2D4AQ9H788 454 aa12.13□□□□□ -0.47
TPM1-212ENST00000558347 MKNK2Q9HBH9 465 aa12.13□□□□□ -0.47
TPM1-212ENST00000558347 PAK6Q9NQU5 681 aaPredicted RBP12.13□□□□□ -0.47
TPM1-212ENST00000558347 SGPL1O95470 568 aa12.12□□□□□ -0.47
TPM1-212ENST00000558347 DSG3P32926 999 aa12.12□□□□□ -0.47
TPM1-212ENST00000558347 CCAR1Q8IX12 1150 aaKnown RBP12.12□□□□□ -0.47
TPM1-212ENST00000558347 IL25Q9H293 177 aa12.12□□□□□ -0.47
TPM1-212ENST00000558347 CWC22Q9HCG8 908 aaKnown RBP12.12□□□□□ -0.47
TPM1-212ENST00000558347 HELLSQ9NRZ9 838 aa12.12□□□□□ -0.47
TPM1-212ENST00000558347 IGKV6D-41A0A0C4DH26 115 aa12.11□□□□□ -0.47
TPM1-212ENST00000558347 GOLGA6L22H0YM25 854 aa12.11□□□□□ -0.47
TPM1-212ENST00000558347 WDR46O15213 610 aaKnown RBP12.11□□□□□ -0.47
TPM1-212ENST00000558347 FLOT1O75955 427 aa12.11□□□□□ -0.47
TPM1-212ENST00000558347 CCNA1P78396 465 aa12.11□□□□□ -0.47
TPM1-212ENST00000558347 NUCB2P80303 420 aa12.11□□□□□ -0.47
TPM1-212ENST00000558347 CCL14Q16627 93 aa12.11□□□□□ -0.47
TPM1-212ENST00000558347 VPS53Q5VIR6 699 aa12.11□□□□□ -0.47
TPM1-212ENST00000558347 WDR78Q5VTH9 848 aa12.11□□□□□ -0.47
TPM1-212ENST00000558347 UBE2Q1Q7Z7E8 422 aa12.11□□□□□ -0.47
TPM1-212ENST00000558347 ATG4CQ96DT6 458 aa12.11□□□□□ -0.47
TPM1-212ENST00000558347 FAM227BQ96M60 508 aa12.11□□□□□ -0.47
TPM1-212ENST00000558347 DEFB118Q96PH6 123 aa12.11□□□□□ -0.47
TPM1-212ENST00000558347 NACAP1Q9BZK3 213 aa12.11□□□□□ -0.47
TPM1-212ENST00000558347 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.11□□□□□ -0.47
TPM1-212ENST00000558347 NAPBQ9H115 298 aa12.11□□□□□ -0.47
TPM1-212ENST00000558347 HOXC10Q9NYD6 342 aa12.11□□□□□ -0.47
TPM1-212ENST00000558347 COL11A1P12107 1806 aaPredicted RBP12.11□□□□□ -0.47
TPM1-212ENST00000558347 MYH4Q9Y623 1939 aa12.11□□□□□ -0.47
TPM1-212ENST00000558347 A0A0D9SFI3 127 aa12.11□□□□□ -0.47
TPM1-212ENST00000558347 ST18O60284 1047 aa12.11□□□□□ -0.47
TPM1-212ENST00000558347 CD2BP2O95400 341 aaKnown RBP12.11□□□□□ -0.47
TPM1-212ENST00000558347 XRCC5P13010 732 aaKnown RBP12.11□□□□□ -0.47
TPM1-212ENST00000558347 RGS2P41220 211 aa12.11□□□□□ -0.47
TPM1-212ENST00000558347 PPARAQ07869 468 aa12.11□□□□□ -0.47
TPM1-212ENST00000558347 MCMDC2Q4G0Z9 681 aa12.11□□□□□ -0.47
TPM1-212ENST00000558347 SAMD1Q6SPF0 538 aaPredicted RBP12.11□□□□□ -0.47
TPM1-212ENST00000558347 MOV10L1Q9BXT6 1211 aaKnown RBP12.11□□□□□ -0.47
TPM1-212ENST00000558347 FBXO28Q9NVF7 368 aa12.11□□□□□ -0.47
TPM1-212ENST00000558347 NYAP2Q9P242 653 aa12.11□□□□□ -0.47
TPM1-212ENST00000558347 RPTORQ8N122 1335 aa12.1□□□□□ -0.47
TPM1-212ENST00000558347 RAD21O60216 631 aa12.1□□□□□ -0.47
TPM1-212ENST00000558347 XRCC6P12956 609 aaKnown RBP eCLIP12.1□□□□□ -0.47
TPM1-212ENST00000558347 PRKAR2AP13861 404 aaKnown RBP12.1□□□□□ -0.47
TPM1-212ENST00000558347 ZKSCAN1P17029 563 aaPredicted RBP12.1□□□□□ -0.47
TPM1-212ENST00000558347 PTPREP23469 700 aa12.1□□□□□ -0.47
TPM1-212ENST00000558347 MAP2K5Q13163 448 aa12.1□□□□□ -0.47
TPM1-212ENST00000558347 GRB14Q14449 540 aa12.1□□□□□ -0.47
TPM1-212ENST00000558347 FAM83BQ5T0W9 1011 aa12.1□□□□□ -0.47
TPM1-212ENST00000558347 MAP3K21Q5TCX8 1036 aa12.1□□□□□ -0.47
TPM1-212ENST00000558347 ZNF444Q8N0Y2 327 aaPredicted RBP12.1□□□□□ -0.47
TPM1-212ENST00000558347 APBA2Q99767 749 aa12.1□□□□□ -0.47
TPM1-212ENST00000558347 LSG1Q9H089 658 aaKnown RBP12.1□□□□□ -0.47
TPM1-212ENST00000558347 SPATC1LQ9H0A9 340 aa12.1□□□□□ -0.47
TPM1-212ENST00000558347 GOPCQ9HD26 462 aa12.1□□□□□ -0.47
TPM1-212ENST00000558347 ANO2Q9NQ90 1003 aa12.1□□□□□ -0.47
TPM1-212ENST00000558347 FLRT1Q9NZU1 646 aa12.1□□□□□ -0.47
TPM1-212ENST00000558347 CLIP2Q9UDT6 1046 aa12.1□□□□□ -0.47
TPM1-212ENST00000558347 ZNF236Q9UL36 1845 aa12.09□□□□□ -0.47
TPM1-212ENST00000558347 SLC15A5A6NIM6 579 aa12.09□□□□□ -0.47
TPM1-212ENST00000558347 FARP2O94887 1054 aaPredicted RBP12.09□□□□□ -0.47
TPM1-212ENST00000558347 TFRCP02786 760 aaKnown RBP12.09□□□□□ -0.47
TPM1-212ENST00000558347 ERCC3P19447 782 aa12.09□□□□□ -0.47
TPM1-212ENST00000558347 CTDSPL2Q05D32 466 aa12.09□□□□□ -0.47
TPM1-212ENST00000558347 PDE4BQ07343 736 aa12.09□□□□□ -0.47
TPM1-212ENST00000558347 CACNB2Q08289 660 aaPredicted RBP12.09□□□□□ -0.47
TPM1-212ENST00000558347 FAM47AQ5JRC9 791 aa12.09□□□□□ -0.47
TPM1-212ENST00000558347 KIAA1211Q6ZU35 1233 aa12.09□□□□□ -0.47
TPM1-212ENST00000558347 ZNF589Q86UQ0 364 aaPredicted RBP12.09□□□□□ -0.47
TPM1-212ENST00000558347 MB21D1Q8N884 522 aa12.09□□□□□ -0.47
TPM1-212ENST00000558347 IL17RAQ96F46 866 aa12.09□□□□□ -0.47
TPM1-212ENST00000558347 CEP95Q96GE4 821 aa12.09□□□□□ -0.47
TPM1-212ENST00000558347 NUP88Q99567 741 aaPredicted RBP12.09□□□□□ -0.47
TPM1-212ENST00000558347 CRISPLD2Q9H0B8 497 aa12.09□□□□□ -0.47
TPM1-212ENST00000558347 ZNF287Q9HBT7 754 aa12.09□□□□□ -0.47
TPM1-212ENST00000558347 HMX1Q9NP08 348 aaPredicted RBP12.09□□□□□ -0.47
TPM1-212ENST00000558347 INCENPQ9NQS7 918 aa12.09□□□□□ -0.47
TPM1-212ENST00000558347 ADAMTS5Q9UNA0 930 aa12.09□□□□□ -0.47
TPM1-212ENST00000558347 TACC3Q9Y6A5 838 aa12.09□□□□□ -0.47
TPM1-212ENST00000558347 PLIN4Q96Q06 1357 aa12.09□□□□□ -0.47
TPM1-212ENST00000558347 CCDC171Q6TFL3 1326 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms