RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 SLC8A1P32418 973 aa15.39■□□□□ 0.05
SPG11-210ENST00000558319 ZNF653Q96CK0 615 aa15.39■□□□□ 0.05
SPG11-210ENST00000558319 VCX3AQ9NNX9 186 aa15.39■□□□□ 0.05
SPG11-210ENST00000558319 DMTNQ08495 405 aa15.39■□□□□ 0.05
SPG11-210ENST00000558319 GOLGA5Q8TBA6 731 aa15.39■□□□□ 0.05
SPG11-210ENST00000558319 RRP15Q9Y3B9 282 aaKnown RBP15.39■□□□□ 0.05
SPG11-210ENST00000558319 CALCRLQ16602 461 aa15.38■□□□□ 0.05
SPG11-210ENST00000558319 TNNI3KQ59H18 835 aa15.38■□□□□ 0.05
SPG11-210ENST00000558319 LIN9Q5TKA1 542 aa15.38■□□□□ 0.05
SPG11-210ENST00000558319 CDC37L1Q7L3B6 337 aa15.38■□□□□ 0.05
SPG11-210ENST00000558319 SDR42E1Q8WUS8 393 aa15.38■□□□□ 0.05
SPG11-210ENST00000558319 FAM207AQ9NSI2 230 aaPredicted RBP15.38■□□□□ 0.05
SPG11-210ENST00000558319 FPGT-TNNI3KV9GXZ4 949 aa15.38■□□□□ 0.05
SPG11-210ENST00000558319 MAP3K5Q99683 1374 aa15.38■□□□□ 0.05
SPG11-210ENST00000558319 RBBP5Q15291 538 aaKnown RBP15.38■□□□□ 0.05
SPG11-210ENST00000558319 RRAGAQ7L523 313 aa15.38■□□□□ 0.05
SPG11-210ENST00000558319 IFT88Q13099 833 aa15.38■□□□□ 0.05
SPG11-210ENST00000558319 DBN1Q16643 649 aa15.38■□□□□ 0.05
SPG11-210ENST00000558319 LMBRD1Q9NUN5 540 aa15.38■□□□□ 0.05
SPG11-210ENST00000558319 TMEM63CQ9P1W3 806 aa15.38■□□□□ 0.05
SPG11-210ENST00000558319 EXOC3O60645 756 aa15.38■□□□□ 0.05
SPG11-210ENST00000558319 HMGB2P26583 209 aaKnown RBP15.38■□□□□ 0.05
SPG11-210ENST00000558319 KLHL30Q0D2K2 578 aa15.38■□□□□ 0.05
SPG11-210ENST00000558319 CCDC89Q8N998 374 aa15.38■□□□□ 0.05
SPG11-210ENST00000558319 METTL14Q9HCE5 456 aaKnown RBP15.38■□□□□ 0.05
SPG11-210ENST00000558319 FANCAO15360 1455 aa15.38■□□□□ 0.05
SPG11-210ENST00000558319 POLE2P56282 527 aa15.38■□□□□ 0.05
SPG11-210ENST00000558319 NCAPG2Q86XI2 1143 aa15.38■□□□□ 0.05
SPG11-210ENST00000558319 IFIH1Q9BYX4 1025 aaKnown RBP15.38■□□□□ 0.05
SPG11-210ENST00000558319 ATICP31939 592 aa15.37■□□□□ 0.05
SPG11-210ENST00000558319 SUGCTQ9HAC7 445 aa15.37■□□□□ 0.05
SPG11-210ENST00000558319 ANLNQ9NQW6 1124 aa15.37■□□□□ 0.05
SPG11-210ENST00000558319 ZNF532Q9HCE3 1301 aa15.37■□□□□ 0.05
SPG11-210ENST00000558319 ZBED4O75132 1171 aa15.37■□□□□ 0.05
SPG11-210ENST00000558319 ALAS1P13196 640 aa15.37■□□□□ 0.05
SPG11-210ENST00000558319 YARSP54577 528 aaKnown RBP15.37■□□□□ 0.05
SPG11-210ENST00000558319 TTC30AQ86WT1 665 aa15.37■□□□□ 0.05
SPG11-210ENST00000558319 KCNK3O14649 394 aa15.37■□□□□ 0.05
SPG11-210ENST00000558319 ARHGEF16Q5VV41 709 aa15.37■□□□□ 0.05
SPG11-210ENST00000558319 USP40Q9NVE5 1235 aa15.37■□□□□ 0.05
SPG11-210ENST00000558319 PPFIA2O75334 1257 aa15.37■□□□□ 0.05
SPG11-210ENST00000558319 INPP1P49441 399 aa15.37■□□□□ 0.05
SPG11-210ENST00000558319 BRD3Q15059 726 aa15.37■□□□□ 0.05
SPG11-210ENST00000558319 RILPL1Q5EBL4 403 aa15.37■□□□□ 0.05
SPG11-210ENST00000558319 SUCLG2Q96I99 432 aa15.37■□□□□ 0.05
SPG11-210ENST00000558319 JPH2Q9BR39 696 aaPredicted RBP15.37■□□□□ 0.05
SPG11-210ENST00000558319 NUP58Q9BVL2 599 aa15.37■□□□□ 0.05
SPG11-210ENST00000558319 TECP42680 631 aa15.37■□□□□ 0.05
SPG11-210ENST00000558319 PUM3Q15397 648 aaKnown RBP15.37■□□□□ 0.05
SPG11-210ENST00000558319 TTC38Q5R3I4 469 aa15.37■□□□□ 0.05
SPG11-210ENST00000558319 C2CD5Q86YS7 1000 aa15.37■□□□□ 0.05
SPG11-210ENST00000558319 M0QZ92 97 aa15.36■□□□□ 0.05
SPG11-210ENST00000558319 ALDH1L1O75891 902 aa15.36■□□□□ 0.05
SPG11-210ENST00000558319 POSTNQ15063 836 aa15.36■□□□□ 0.05
SPG11-210ENST00000558319 RPS6KA2Q15349 733 aa15.36■□□□□ 0.05
SPG11-210ENST00000558319 KIAA0825Q8IV33 1275 aa15.36■□□□□ 0.05
SPG11-210ENST00000558319 PALM2Q8IXS6 379 aa15.36■□□□□ 0.05
SPG11-210ENST00000558319 FAM71BQ8TC56 605 aa15.36■□□□□ 0.05
SPG11-210ENST00000558319 ZMAT2Q96NC0 199 aaKnown RBP15.36■□□□□ 0.05
SPG11-210ENST00000558319 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.36■□□□□ 0.05
SPG11-210ENST00000558319 GNL1P36915 607 aaPredicted RBP15.36■□□□□ 0.05
SPG11-210ENST00000558319 GPKOWQ92917 476 aaPredicted RBP eCLIP15.36■□□□□ 0.05
SPG11-210ENST00000558319 KRT12Q99456 494 aa15.36■□□□□ 0.05
SPG11-210ENST00000558319 ANKFY1Q9P2R3 1169 aa15.36■□□□□ 0.05
SPG11-210ENST00000558319 PCDH11XQ9BZA7 1347 aa15.36■□□□□ 0.05
SPG11-210ENST00000558319 PCDH11YQ9BZA8 1340 aa15.36■□□□□ 0.05
SPG11-210ENST00000558319 SFMBT2Q5VUG0 894 aa15.36■□□□□ 0.05
SPG11-210ENST00000558319 SPICE1Q8N0Z3 855 aa15.36■□□□□ 0.05
SPG11-210ENST00000558319 HVCN1Q96D96 273 aa15.36■□□□□ 0.05
SPG11-210ENST00000558319 CHMP6Q96FZ7 201 aa15.36■□□□□ 0.05
SPG11-210ENST00000558319 CLRN2A0PK11 232 aa15.36■□□□□ 0.05
SPG11-210ENST00000558319 NKX1-1Q15270 411 aaPredicted RBP15.36■□□□□ 0.05
SPG11-210ENST00000558319 RIOK1Q9BRS2 568 aaKnown RBP15.36■□□□□ 0.05
SPG11-210ENST00000558319 ADCY7P51828 1080 aa15.36■□□□□ 0.05
SPG11-210ENST00000558319 ADCY1Q08828 1119 aa15.36■□□□□ 0.05
SPG11-210ENST00000558319 STK10O94804 968 aaKnown RBP15.35■□□□□ 0.05
SPG11-210ENST00000558319 PLCD1P51178 756 aa15.35■□□□□ 0.05
SPG11-210ENST00000558319 ARPP19P56211 112 aa15.35■□□□□ 0.05
SPG11-210ENST00000558319 LINS1Q8NG48 757 aa15.35■□□□□ 0.05
SPG11-210ENST00000558319 TCP11Q8WWU5 503 aa15.35■□□□□ 0.05
SPG11-210ENST00000558319 SNX14Q9Y5W7 946 aa15.35■□□□□ 0.05
SPG11-210ENST00000558319 MRFAP1Q9Y605 127 aa15.35■□□□□ 0.05
SPG11-210ENST00000558319 LUC7L3O95232 432 aaKnown RBP15.35■□□□□ 0.05
SPG11-210ENST00000558319 APOEP02649 317 aa15.35■□□□□ 0.05
SPG11-210ENST00000558319 PRPF38AQ8NAV1 312 aaKnown RBP15.35■□□□□ 0.05
SPG11-210ENST00000558319 ARHGAP45Q92619 1136 aa15.35■□□□□ 0.05
SPG11-210ENST00000558319 ZBTB12Q9Y330 459 aaPredicted RBP15.35■□□□□ 0.05
SPG11-210ENST00000558319 LPXNO60711 386 aa15.35■□□□□ 0.05
SPG11-210ENST00000558319 GYG1P46976 350 aa15.35■□□□□ 0.05
SPG11-210ENST00000558319 IFNAR2P48551 515 aa15.35■□□□□ 0.05
SPG11-210ENST00000558319 LGSNQ5TDP6 509 aa15.35■□□□□ 0.05
SPG11-210ENST00000558319 MLXIPQ9HAP2 919 aa15.35■□□□□ 0.05
SPG11-210ENST00000558319 WDR46O15213 610 aaKnown RBP15.35■□□□□ 0.05
SPG11-210ENST00000558319 CASP2P42575 452 aa15.35■□□□□ 0.05
SPG11-210ENST00000558319 TFAP4Q01664 338 aa15.35■□□□□ 0.05
SPG11-210ENST00000558319 PPP4R1Q8TF05 950 aa15.35■□□□□ 0.05
SPG11-210ENST00000558319 NUCKS1Q9H1E3 243 aaKnown RBP15.35■□□□□ 0.05
SPG11-210ENST00000558319 KRIT1O00522 736 aa15.35■□□□□ 0.05
SPG11-210ENST00000558319 DLATP10515 647 aaKnown RBP15.35■□□□□ 0.05
SPG11-210ENST00000558319 CABP7Q86V35 215 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms