RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 FCER1AP12319 257 aa17.48■□□□□ 0.39
SHMT2-235ENST00000557740 MX1P20591 662 aa17.48■□□□□ 0.39
SHMT2-235ENST00000557740 ABRAQ8N0Z2 381 aa17.48■□□□□ 0.39
SHMT2-235ENST00000557740 OTUD7AQ8TE49 926 aaPredicted RBP17.48■□□□□ 0.39
SHMT2-235ENST00000557740 NACAP1Q9BZK3 213 aa17.48■□□□□ 0.39
SHMT2-235ENST00000557740 FBXO28Q9NVF7 368 aa17.48■□□□□ 0.39
SHMT2-235ENST00000557740 STAP2Q9UGK3 403 aa17.48■□□□□ 0.39
SHMT2-235ENST00000557740 PPP1R9AQ9ULJ8 1098 aa17.48■□□□□ 0.39
SHMT2-235ENST00000557740 ZNF236Q9UL36 1845 aa17.48■□□□□ 0.39
SHMT2-235ENST00000557740 COBLO75128 1261 aa17.47■□□□□ 0.39
SHMT2-235ENST00000557740 CYBAP13498 195 aa17.47■□□□□ 0.39
SHMT2-235ENST00000557740 TMEM132BQ14DG7 1078 aa17.47■□□□□ 0.39
SHMT2-235ENST00000557740 PI4K2BQ8TCG2 481 aa17.47■□□□□ 0.39
SHMT2-235ENST00000557740 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.47■□□□□ 0.395e-8■■■□□ 18.8
SHMT2-235ENST00000557740 NYAP2Q9P242 653 aa17.47■□□□□ 0.39
SHMT2-235ENST00000557740 RANBP2P49792 3224 aaKnown RBP17.47■□□□□ 0.39
SHMT2-235ENST00000557740 VWA5AO00534 786 aa17.46■□□□□ 0.39
SHMT2-235ENST00000557740 SYN1P17600 705 aa17.46■□□□□ 0.39
SHMT2-235ENST00000557740 COPB2P35606 906 aa17.46■□□□□ 0.39
SHMT2-235ENST00000557740 TRPV1Q8NER1 839 aa17.46■□□□□ 0.39
SHMT2-235ENST00000557740 RLFQ13129 1914 aa17.46■□□□□ 0.39
SHMT2-235ENST00000557740 ALPK3Q96L96 1907 aa17.46■□□□□ 0.39
SHMT2-235ENST00000557740 PRDM1O75626 825 aa17.45■□□□□ 0.38
SHMT2-235ENST00000557740 IGHA2P01877 340 aa17.45■□□□□ 0.38
SHMT2-235ENST00000557740 STAT3P40763 770 aa17.45■□□□□ 0.38
SHMT2-235ENST00000557740 KCTD2Q14681 263 aa17.45■□□□□ 0.38
SHMT2-235ENST00000557740 LRRC26Q2I0M4 334 aa17.45■□□□□ 0.38
SHMT2-235ENST00000557740 RIOX2Q8IUF8 465 aa17.45■□□□□ 0.38
SHMT2-235ENST00000557740 IFNL3Q8IZI9 196 aa17.45■□□□□ 0.38
SHMT2-235ENST00000557740 ZNF444Q8N0Y2 327 aaPredicted RBP17.45■□□□□ 0.38
SHMT2-235ENST00000557740 MMP19Q99542 508 aa17.45■□□□□ 0.38
SHMT2-235ENST00000557740 NUP88Q99567 741 aaPredicted RBP17.45■□□□□ 0.38
SHMT2-235ENST00000557740 GDF15Q99988 308 aa17.45■□□□□ 0.38
SHMT2-235ENST00000557740 SLF1Q9BQI6 1058 aa17.45■□□□□ 0.38
SHMT2-235ENST00000557740 NAPBQ9H115 298 aa17.45■□□□□ 0.38
SHMT2-235ENST00000557740 ADAMTS5Q9UNA0 930 aa17.45■□□□□ 0.38
SHMT2-235ENST00000557740 PATL2C9JE40 543 aaKnown RBP17.44■□□□□ 0.38
SHMT2-235ENST00000557740 SLC3A2P08195 630 aaKnown RBP17.44■□□□□ 0.38
SHMT2-235ENST00000557740 PDE4BQ07343 736 aa17.44■□□□□ 0.38
SHMT2-235ENST00000557740 ZMYM1Q5SVZ6 1142 aa17.44■□□□□ 0.38
SHMT2-235ENST00000557740 MAML3Q96JK9 1138 aa17.44■□□□□ 0.38
SHMT2-235ENST00000557740 CRBNQ96SW2 442 aa17.44■□□□□ 0.38
SHMT2-235ENST00000557740 SEC62Q99442 399 aaKnown RBP17.44■□□□□ 0.38
SHMT2-235ENST00000557740 SENP6Q9GZR1 1112 aaPredicted RBP17.44■□□□□ 0.38
SHMT2-235ENST00000557740 CLIP2Q9UDT6 1046 aa17.44■□□□□ 0.38
SHMT2-235ENST00000557740 CTDP1Q9Y5B0 961 aaPredicted RBP17.44■□□□□ 0.38
SHMT2-235ENST00000557740 F5H6K3 240 aa17.43■□□□□ 0.38
SHMT2-235ENST00000557740 DNM1LO00429 736 aa17.43■□□□□ 0.38
SHMT2-235ENST00000557740 SEPT4O43236 478 aa17.43■□□□□ 0.38
SHMT2-235ENST00000557740 NDUFB10O96000 172 aa17.43■□□□□ 0.38
SHMT2-235ENST00000557740 MAGEA10P43363 369 aaPredicted RBP17.43■□□□□ 0.38
SHMT2-235ENST00000557740 KLRC3Q07444 240 aa17.43■□□□□ 0.38
SHMT2-235ENST00000557740 ANKRD45Q5TZF3 282 aa17.43■□□□□ 0.38
SHMT2-235ENST00000557740 TEX13BQ9BXU2 312 aa17.43■□□□□ 0.38
SHMT2-235ENST00000557740 ZNF214Q9UL59 606 aaPredicted RBP17.43■□□□□ 0.38
SHMT2-235ENST00000557740 GREB1LQ9C091 1923 aaPredicted RBP17.43■□□□□ 0.38
SHMT2-235ENST00000557740 IGKV6D-41A0A0C4DH26 115 aa17.42■□□□□ 0.38
SHMT2-235ENST00000557740 KBTBD13C9JR72 458 aa17.42■□□□□ 0.38
SHMT2-235ENST00000557740 TTLL1O95922 423 aa17.42■□□□□ 0.38
SHMT2-235ENST00000557740 MYCNP04198 464 aaPredicted RBP17.42■□□□□ 0.38
SHMT2-235ENST00000557740 PGK2P07205 417 aa17.42■□□□□ 0.38
SHMT2-235ENST00000557740 TSPY3P0CV98 308 aa17.42■□□□□ 0.38
SHMT2-235ENST00000557740 TSPY8P0CW00 308 aa17.42■□□□□ 0.38
SHMT2-235ENST00000557740 BMP8BP34820 402 aa17.42■□□□□ 0.38
SHMT2-235ENST00000557740 PPARAQ07869 468 aa17.42■□□□□ 0.38
SHMT2-235ENST00000557740 SNRNP48Q6IEG0 339 aaKnown RBP17.42■□□□□ 0.38
SHMT2-235ENST00000557740 ARRDC4Q8NCT1 418 aa17.42■□□□□ 0.38
SHMT2-235ENST00000557740 REPS2Q8NFH8 660 aa17.42■□□□□ 0.38
SHMT2-235ENST00000557740 CEP95Q96GE4 821 aa17.42■□□□□ 0.38
SHMT2-235ENST00000557740 SYNPO2Q9UMS6 1093 aa17.42■□□□□ 0.38
SHMT2-235ENST00000557740 PLIN4Q96Q06 1357 aa17.41■□□□□ 0.38
SHMT2-235ENST00000557740 ATN1P54259 1190 aaPredicted RBP17.41■□□□□ 0.38
SHMT2-235ENST00000557740 GJC2Q5T442 439 aaPredicted RBP17.41■□□□□ 0.38
SHMT2-235ENST00000557740 ANO1Q5XXA6 986 aa17.41■□□□□ 0.38
SHMT2-235ENST00000557740 LRRC47Q8N1G4 583 aaKnown RBP17.41■□□□□ 0.38
SHMT2-235ENST00000557740 PRPF38AQ8NAV1 312 aaKnown RBP17.41■□□□□ 0.38
SHMT2-235ENST00000557740 MTMR4Q9NYA4 1195 aa17.41■□□□□ 0.38
SHMT2-235ENST00000557740 ISY1Q9ULR0 285 aaKnown RBP17.41■□□□□ 0.38
SHMT2-235ENST00000557740 PARP14Q460N5 1801 aa17.41■□□□□ 0.38
SHMT2-235ENST00000557740 SALL3Q9BXA9 1300 aa17.41■□□□□ 0.38
SHMT2-235ENST00000557740 FRMPD3Q5JV73 1810 aa17.4■□□□□ 0.38
SHMT2-235ENST00000557740 ZBED4O75132 1171 aa17.4■□□□□ 0.38
SHMT2-235ENST00000557740 PRAMEF19Q5SWL8 479 aa17.4■□□□□ 0.38
SHMT2-235ENST00000557740 GMCL1P1Q8NEA9 526 aa17.4■□□□□ 0.38
SHMT2-235ENST00000557740 NEDD1Q8NHV4 660 aa17.4■□□□□ 0.38
SHMT2-235ENST00000557740 KIFC2Q96AC6 838 aa17.4■□□□□ 0.38
SHMT2-235ENST00000557740 EVI5LQ96CN4 794 aa17.4■□□□□ 0.38
SHMT2-235ENST00000557740 UBE2OQ9C0C9 1292 aaKnown RBP17.4■□□□□ 0.38
SHMT2-235ENST00000557740 NRBP1Q9UHY1 535 aa17.4■□□□□ 0.38
SHMT2-235ENST00000557740 SOX1O00570 391 aaPredicted RBP17.39■□□□□ 0.37
SHMT2-235ENST00000557740 SLC4A3P48751 1232 aa17.39■□□□□ 0.37
SHMT2-235ENST00000557740 HDAC1Q13547 482 aaPredicted RBP17.39■□□□□ 0.37
SHMT2-235ENST00000557740 ZNF792Q3KQV3 632 aa17.39■□□□□ 0.37
SHMT2-235ENST00000557740 FAM47AQ5JRC9 791 aa17.39■□□□□ 0.37
SHMT2-235ENST00000557740 PPP4R3BQ5MIZ7 849 aa17.39■□□□□ 0.37
SHMT2-235ENST00000557740 CCDC129Q6ZRS4 1044 aa17.39■□□□□ 0.37
SHMT2-235ENST00000557740 CPXCR1Q8N123 301 aa17.39■□□□□ 0.37
SHMT2-235ENST00000557740 MKL1Q969V6 931 aa17.39■□□□□ 0.37
SHMT2-235ENST00000557740 YTHDC1Q96MU7 727 aaKnown RBP17.39■□□□□ 0.37
SHMT2-235ENST00000557740 TINF2Q9BSI4 451 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms