RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 OPA1O60313 960 aa11.73□□□□□ -0.53
SUPT16H-207ENST00000557394 ECM2O94769 699 aaPredicted RBP11.73□□□□□ -0.53
SUPT16H-207ENST00000557394 CASP14P31944 242 aa11.73□□□□□ -0.53
SUPT16H-207ENST00000557394 FXR1P51114 621 aaKnown RBP eCLIP11.73□□□□□ -0.53
SUPT16H-207ENST00000557394 TEFQ10587 303 aa11.73□□□□□ -0.53
SUPT16H-207ENST00000557394 POSTNQ15063 836 aa11.73□□□□□ -0.53
SUPT16H-207ENST00000557394 SLC9C2Q5TAH2 1124 aa11.73□□□□□ -0.53
SUPT16H-207ENST00000557394 TLDC1Q6P9B6 456 aa11.73□□□□□ -0.53
SUPT16H-207ENST00000557394 SPATA20Q8TB22 786 aa11.73□□□□□ -0.53
SUPT16H-207ENST00000557394 HAUS7Q99871 368 aa11.73□□□□□ -0.53
SUPT16H-207ENST00000557394 GJB4Q9NTQ9 266 aa11.73□□□□□ -0.53
SUPT16H-207ENST00000557394 ABCF2Q9UG63 623 aa11.73□□□□□ -0.53
SUPT16H-207ENST00000557394 DBNLQ9UJU6 430 aaKnown RBP11.73□□□□□ -0.53
SUPT16H-207ENST00000557394 HPS5Q9UPZ3 1129 aa11.73□□□□□ -0.53
SUPT16H-207ENST00000557394 PALLDQ8WX93 1383 aa11.73□□□□□ -0.53
SUPT16H-207ENST00000557394 GRIK3Q13003 919 aa11.72□□□□□ -0.53
SUPT16H-207ENST00000557394 CCDC40Q4G0X9 1142 aa11.72□□□□□ -0.53
SUPT16H-207ENST00000557394 CDKAL1Q5VV42 579 aa11.72□□□□□ -0.53
SUPT16H-207ENST00000557394 ANKRD18AQ8IVF6 992 aa11.72□□□□□ -0.53
SUPT16H-207ENST00000557394 RABEP2Q9H5N1 569 aa11.72□□□□□ -0.53
SUPT16H-207ENST00000557394 HELLSQ9NRZ9 838 aa11.72□□□□□ -0.53
SUPT16H-207ENST00000557394 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.72□□□□□ -0.53
SUPT16H-207ENST00000557394 MAP3K2Q9Y2U5 619 aa11.72□□□□□ -0.53
SUPT16H-207ENST00000557394 SAR1BQ9Y6B6 198 aa11.72□□□□□ -0.53
SUPT16H-207ENST00000557394 GRM8O00222 908 aa11.72□□□□□ -0.53
SUPT16H-207ENST00000557394 NEBLO76041 1014 aa11.72□□□□□ -0.53
SUPT16H-207ENST00000557394 ECEL1O95672 775 aa11.72□□□□□ -0.53
SUPT16H-207ENST00000557394 INHBEP58166 350 aa11.72□□□□□ -0.53
SUPT16H-207ENST00000557394 CEP85LQ5SZL2 805 aa11.72□□□□□ -0.53
SUPT16H-207ENST00000557394 CYP26C1Q6V0L0 522 aa11.72□□□□□ -0.53
SUPT16H-207ENST00000557394 KSR2Q6VAB6 950 aa11.72□□□□□ -0.53
SUPT16H-207ENST00000557394 DZIP3Q86Y13 1208 aaKnown RBP11.72□□□□□ -0.53
SUPT16H-207ENST00000557394 GSPT2Q8IYD1 628 aaKnown RBP11.72□□□□□ -0.53
SUPT16H-207ENST00000557394 CPLX3Q8WVH0 158 aa11.72□□□□□ -0.53
SUPT16H-207ENST00000557394 GDAP1L1Q96MZ0 367 aa11.72□□□□□ -0.53
SUPT16H-207ENST00000557394 CTAGE1Q96RT6 745 aa11.72□□□□□ -0.53
SUPT16H-207ENST00000557394 TRIM6Q9C030 488 aaPredicted RBP11.72□□□□□ -0.53
SUPT16H-207ENST00000557394 MAP3K20Q9NYL2 800 aaKnown RBP11.72□□□□□ -0.53
SUPT16H-207ENST00000557394 SUN2Q9UH99 717 aa11.72□□□□□ -0.53
SUPT16H-207ENST00000557394 ARIH1Q9Y4X5 557 aaPredicted RBP11.72□□□□□ -0.53
SUPT16H-207ENST00000557394 WDR17Q8IZU2 1322 aa11.71□□□□□ -0.53
SUPT16H-207ENST00000557394 DDX60Q8IY21 1712 aaKnown RBP11.71□□□□□ -0.53
SUPT16H-207ENST00000557394 A0A0G2JLW4 131 aa11.71□□□□□ -0.53
SUPT16H-207ENST00000557394 SRRM3A6NNA2 597 aaPredicted RBP11.71□□□□□ -0.53
SUPT16H-207ENST00000557394 TTMPQ5BVD1 217 aa11.71□□□□□ -0.53
SUPT16H-207ENST00000557394 SPATA1Q5VX52 437 aa11.71□□□□□ -0.53
SUPT16H-207ENST00000557394 ALS2CLQ60I27 953 aa11.71□□□□□ -0.53
SUPT16H-207ENST00000557394 CCDC70Q6NSX1 233 aa11.71□□□□□ -0.53
SUPT16H-207ENST00000557394 CCDC50Q8IVM0 306 aa11.71□□□□□ -0.53
SUPT16H-207ENST00000557394 CCDC13Q8IYE1 715 aa11.71□□□□□ -0.53
SUPT16H-207ENST00000557394 HS6ST3Q8IZP7 471 aa11.71□□□□□ -0.53
SUPT16H-207ENST00000557394 KBTBD3Q8NAB2 608 aa11.71□□□□□ -0.53
SUPT16H-207ENST00000557394 LRRC59Q96AG4 307 aaKnown RBP11.71□□□□□ -0.53
SUPT16H-207ENST00000557394 SLC40A1Q9NP59 571 aa11.71□□□□□ -0.53
SUPT16H-207ENST00000557394 ABHD10Q9NUJ1 306 aa11.71□□□□□ -0.53
SUPT16H-207ENST00000557394 DDX20Q9UHI6 824 aaKnown RBP11.71□□□□□ -0.53
SUPT16H-207ENST00000557394 REXO2Q9Y3B8 237 aaKnown RBP11.71□□□□□ -0.53
SUPT16H-207ENST00000557394 ANKRD33BA6NCL7 494 aa11.71□□□□□ -0.54
SUPT16H-207ENST00000557394 HOXC9P31274 260 aa11.71□□□□□ -0.54
SUPT16H-207ENST00000557394 PDE6BP35913 854 aa11.71□□□□□ -0.54
SUPT16H-207ENST00000557394 PDCLQ13371 301 aa11.71□□□□□ -0.54
SUPT16H-207ENST00000557394 CWF19L2Q2TBE0 894 aaKnown RBP11.71□□□□□ -0.54
SUPT16H-207ENST00000557394 NAA35Q5VZE5 725 aa11.71□□□□□ -0.54
SUPT16H-207ENST00000557394 NAIF1Q69YI7 327 aaPredicted RBP11.71□□□□□ -0.54
SUPT16H-207ENST00000557394 C6orf89Q6UWU4 347 aa11.71□□□□□ -0.54
SUPT16H-207ENST00000557394 VPS37DQ86XT2 251 aa11.71□□□□□ -0.54
SUPT16H-207ENST00000557394 KLHL23Q8NBE8 558 aa11.71□□□□□ -0.54
SUPT16H-207ENST00000557394 LINS1Q8NG48 757 aa11.71□□□□□ -0.54
SUPT16H-207ENST00000557394 IP6K1Q92551 441 aa11.71□□□□□ -0.54
SUPT16H-207ENST00000557394 EPN3Q9H201 632 aa11.71□□□□□ -0.54
SUPT16H-207ENST00000557394 DIS3Q9Y2L1 958 aaKnown RBP11.71□□□□□ -0.54
SUPT16H-207ENST00000557394 COL18A1P39060 1754 aa11.71□□□□□ -0.54
SUPT16H-207ENST00000557394 C4AP0C0L4 1744 aa11.71□□□□□ -0.54
SUPT16H-207ENST00000557394 C4BP0C0L5 1744 aa11.71□□□□□ -0.54
SUPT16H-207ENST00000557394 CAND2O75155 1236 aa11.7□□□□□ -0.54
SUPT16H-207ENST00000557394 ZMYND10O75800 440 aa11.7□□□□□ -0.54
SUPT16H-207ENST00000557394 ANXA1P04083 346 aa11.7□□□□□ -0.54
SUPT16H-207ENST00000557394 ATP1A1P05023 1023 aaKnown RBP11.7□□□□□ -0.54
SUPT16H-207ENST00000557394 DSG3P32926 999 aa11.7□□□□□ -0.54
SUPT16H-207ENST00000557394 VASPP50552 380 aaPredicted RBP11.7□□□□□ -0.54
SUPT16H-207ENST00000557394 PSMC1P62191 440 aaKnown RBP11.7□□□□□ -0.54
SUPT16H-207ENST00000557394 TNNI3KQ59H18 835 aa11.7□□□□□ -0.54
SUPT16H-207ENST00000557394 TTC39AQ5SRH9 613 aa11.7□□□□□ -0.54
SUPT16H-207ENST00000557394 CHST3Q7LGC8 479 aa11.7□□□□□ -0.54
SUPT16H-207ENST00000557394 FAM228AQ86W67 206 aa11.7□□□□□ -0.54
SUPT16H-207ENST00000557394 HAUS4Q9H6D7 363 aa11.7□□□□□ -0.54
SUPT16H-207ENST00000557394 ATP6V0A4Q9HBG4 840 aa11.7□□□□□ -0.54
SUPT16H-207ENST00000557394 GPHNQ9NQX3 736 aaPredicted RBP11.7□□□□□ -0.54
SUPT16H-207ENST00000557394 HDAC6Q9UBN7 1215 aa11.7□□□□□ -0.54
SUPT16H-207ENST00000557394 DBF4Q9UBU7 674 aaPredicted RBP11.7□□□□□ -0.54
SUPT16H-207ENST00000557394 FPGT-TNNI3KV9GXZ4 949 aa11.7□□□□□ -0.54
SUPT16H-207ENST00000557394 CPDO75976 1380 aa11.7□□□□□ -0.54
SUPT16H-207ENST00000557394 A0A1B0GUA9 196 aa11.7□□□□□ -0.54
SUPT16H-207ENST00000557394 HSPD1P10809 573 aaKnown RBP11.7□□□□□ -0.54
SUPT16H-207ENST00000557394 TBC1D8BQ0IIM8 1120 aa11.7□□□□□ -0.54
SUPT16H-207ENST00000557394 CUL4BQ13620 913 aa11.7□□□□□ -0.54
SUPT16H-207ENST00000557394 ZNF827Q17R98 1081 aa11.7□□□□□ -0.54
SUPT16H-207ENST00000557394 FILIP1LQ4L180 1135 aa11.7□□□□□ -0.54
SUPT16H-207ENST00000557394 KDM7AQ6ZMT4 941 aa11.7□□□□□ -0.54
SUPT16H-207ENST00000557394 MMGT1Q8N4V1 131 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms