RNA–Protein interactions for RNA: ENST00000557273.5

RDH11-209, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 562 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-209ENST00000557273 UBE3CQ15386 1083 aa12.2□□□□□ -0.46
RDH11-209ENST00000557273 TRIM60Q495X7 471 aa12.2□□□□□ -0.46
RDH11-209ENST00000557273 FAM47AQ5JRC9 791 aa12.2□□□□□ -0.46
RDH11-209ENST00000557273 C12orf60Q5U649 245 aa12.2□□□□□ -0.46
RDH11-209ENST00000557273 C16orf86Q6ZW13 317 aa12.2□□□□□ -0.46
RDH11-209ENST00000557273 RIOX2Q8IUF8 465 aa12.2□□□□□ -0.46
RDH11-209ENST00000557273 DYNLL2Q96FJ2 89 aa12.2□□□□□ -0.46
RDH11-209ENST00000557273 DNAJC2Q99543 621 aaKnown RBP12.2□□□□□ -0.46
RDH11-209ENST00000557273 ARMT1Q9H993 441 aa12.2□□□□□ -0.46
RDH11-209ENST00000557273 PAG1Q9NWQ8 432 aa12.2□□□□□ -0.46
RDH11-209ENST00000557273 TMEM265A0A087WTH1 108 aa12.19□□□□□ -0.46
RDH11-209ENST00000557273 MBD4O95243 580 aa12.19□□□□□ -0.46
RDH11-209ENST00000557273 ATP5JP18859 108 aa12.19□□□□□ -0.46
RDH11-209ENST00000557273 CDK8P49336 464 aa12.19□□□□□ -0.46
RDH11-209ENST00000557273 HNRNPUQ00839 825 aaKnown RBP eCLIP12.19□□□□□ -0.46
RDH11-209ENST00000557273 PLS1Q14651 629 aa12.19□□□□□ -0.46
RDH11-209ENST00000557273 SHHQ15465 462 aa12.19□□□□□ -0.46
RDH11-209ENST00000557273 ZNF792Q3KQV3 632 aa12.19□□□□□ -0.46
RDH11-209ENST00000557273 C9orf50Q5SZB4 431 aa12.19□□□□□ -0.46
RDH11-209ENST00000557273 ANO1Q5XXA6 986 aa12.19□□□□□ -0.46
RDH11-209ENST00000557273 CLEC10AQ8IUN9 316 aa12.19□□□□□ -0.46
RDH11-209ENST00000557273 SIRT2Q8IXJ6 389 aa12.19□□□□□ -0.46
RDH11-209ENST00000557273 AMOTL1Q8IY63 956 aa12.19□□□□□ -0.46
RDH11-209ENST00000557273 SPICE1Q8N0Z3 855 aa12.19□□□□□ -0.46
RDH11-209ENST00000557273 REPS2Q8NFH8 660 aa12.19□□□□□ -0.46
RDH11-209ENST00000557273 PANK1Q8TE04 598 aa12.19□□□□□ -0.46
RDH11-209ENST00000557273 TINF2Q9BSI4 451 aa12.19□□□□□ -0.46
RDH11-209ENST00000557273 COL25A1Q9BXS0 654 aaPredicted RBP12.19□□□□□ -0.46
RDH11-209ENST00000557273 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.19□□□□□ -0.46
RDH11-209ENST00000557273 KANSL2Q9H9L4 492 aa12.19□□□□□ -0.46
RDH11-209ENST00000557273 ZNF214Q9UL59 606 aaPredicted RBP12.19□□□□□ -0.46
RDH11-209ENST00000557273 PPP1R9AQ9ULJ8 1098 aa12.19□□□□□ -0.46
RDH11-209ENST00000557273 VCANP13611 3396 aa12.18□□□□□ -0.46
RDH11-209ENST00000557273 TRIM43BA6NCK2 446 aa12.18□□□□□ -0.46
RDH11-209ENST00000557273 VWA5AO00534 786 aa12.18□□□□□ -0.46
RDH11-209ENST00000557273 PRKAB2O43741 272 aa12.18□□□□□ -0.46
RDH11-209ENST00000557273 RARBP10826 455 aa12.18□□□□□ -0.46
RDH11-209ENST00000557273 EEF2P13639 858 aaKnown RBP12.18□□□□□ -0.46
RDH11-209ENST00000557273 ADCYAP1R1P41586 468 aa12.18□□□□□ -0.46
RDH11-209ENST00000557273 PRAMEF19Q5SWL8 479 aa12.18□□□□□ -0.46
RDH11-209ENST00000557273 MSL3Q8N5Y2 521 aaKnown RBP12.18□□□□□ -0.46
RDH11-209ENST00000557273 BADQ92934 168 aa12.18□□□□□ -0.46
RDH11-209ENST00000557273 TRIM43Q96BQ3 446 aaPredicted RBP12.18□□□□□ -0.46
RDH11-209ENST00000557273 MMP19Q99542 508 aa12.18□□□□□ -0.46
RDH11-209ENST00000557273 HAUS7Q99871 368 aa12.18□□□□□ -0.46
RDH11-209ENST00000557273 XPNPEP3Q9NQH7 507 aa12.18□□□□□ -0.46
RDH11-209ENST00000557273 ZBTB40Q9NUA8 1239 aa12.18□□□□□ -0.46
RDH11-209ENST00000557273 DDX19BQ9UMR2 479 aa12.18□□□□□ -0.46
RDH11-209ENST00000557273 TACC3Q9Y6A5 838 aa12.18□□□□□ -0.46
RDH11-209ENST00000557273 TTC28Q96AY4 2481 aa12.18□□□□□ -0.46
RDH11-209ENST00000557273 MYH4Q9Y623 1939 aa12.17□□□□□ -0.46
RDH11-209ENST00000557273 USP17L12C9JPN9 530 aa12.17□□□□□ -0.46
RDH11-209ENST00000557273 USP17L21D6R901 530 aa12.17□□□□□ -0.46
RDH11-209ENST00000557273 KIAA0355O15063 1070 aa12.17□□□□□ -0.46
RDH11-209ENST00000557273 ZNF865P0CJ78 1059 aaPredicted RBP12.17□□□□□ -0.46
RDH11-209ENST00000557273 AKR1A1P14550 325 aa12.17□□□□□ -0.46
RDH11-209ENST00000557273 STAT3P40763 770 aa12.17□□□□□ -0.46
RDH11-209ENST00000557273 TLE2Q04725 743 aa12.17□□□□□ -0.46
RDH11-209ENST00000557273 KCTD2Q14681 263 aa12.17□□□□□ -0.46
RDH11-209ENST00000557273 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.17□□□□□ -0.46
RDH11-209ENST00000557273 SH3RF1Q7Z6J0 888 aa12.17□□□□□ -0.46
RDH11-209ENST00000557273 RNF180Q86T96 592 aa12.17□□□□□ -0.46
RDH11-209ENST00000557273 DDRGK1Q96HY6 314 aa12.17□□□□□ -0.46
RDH11-209ENST00000557273 TOX2Q96NM4 488 aa12.17□□□□□ -0.46
RDH11-209ENST00000557273 CDX2Q99626 313 aaPredicted RBP12.17□□□□□ -0.46
RDH11-209ENST00000557273 TSEN34Q9BSV6 310 aaKnown RBP12.17□□□□□ -0.46
RDH11-209ENST00000557273 BOLA2Q9H3K6 86 aa12.17□□□□□ -0.46
RDH11-209ENST00000557273 SEMA6BQ9H3T3 888 aa12.17□□□□□ -0.46
RDH11-209ENST00000557273 GOPCQ9HD26 462 aa12.17□□□□□ -0.46
RDH11-209ENST00000557273 PRDM5Q9NQX1 630 aaPredicted RBP12.17□□□□□ -0.46
RDH11-209ENST00000557273 MCM3APO60318 1980 aa12.17□□□□□ -0.46
RDH11-209ENST00000557273 EYSQ5T1H1 3165 aa12.16□□□□□ -0.46
RDH11-209ENST00000557273 SYNGAP1Q96PV0 1343 aa12.16□□□□□ -0.46
RDH11-209ENST00000557273 SMIM22K7EJ46 135 aa12.16□□□□□ -0.46
RDH11-209ENST00000557273 ADAMTS4O75173 837 aa12.16□□□□□ -0.46
RDH11-209ENST00000557273 CLTBP09497 229 aa12.16□□□□□ -0.46
RDH11-209ENST00000557273 CTR9Q6PD62 1173 aa12.16□□□□□ -0.46
RDH11-209ENST00000557273 MAMDC4Q6UXC1 1216 aa12.16□□□□□ -0.46
RDH11-209ENST00000557273 ANKRD33Q7Z3H0 272 aa12.16□□□□□ -0.46
RDH11-209ENST00000557273 FAM161BQ96MY7 647 aa12.16□□□□□ -0.46
RDH11-209ENST00000557273 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.16□□□□□ -0.46
RDH11-209ENST00000557273 TTYH1Q9H313 450 aaPredicted RBP12.16□□□□□ -0.46
RDH11-209ENST00000557273 FBXO28Q9NVF7 368 aa12.16□□□□□ -0.46
RDH11-209ENST00000557273 ARPP21Q9UBL0 812 aaPredicted RBP12.16□□□□□ -0.46
RDH11-209ENST00000557273 MYO9BQ13459 2157 aa12.15□□□□□ -0.46
RDH11-209ENST00000557273 DNAJC25-GNG10A0A024R161 153 aa12.15□□□□□ -0.46
RDH11-209ENST00000557273 CYP2D7A0A087X1C5 515 aa12.15□□□□□ -0.46
RDH11-209ENST00000557273 A0A1W2PQ45 241 aaPredicted RBP12.15□□□□□ -0.46
RDH11-209ENST00000557273 A0A1W2PQY0 241 aa12.15□□□□□ -0.46
RDH11-209ENST00000557273 MOXD2PA6NHM9 499 aa12.15□□□□□ -0.46
RDH11-209ENST00000557273 ATP2A1O14983 1001 aa12.15□□□□□ -0.46
RDH11-209ENST00000557273 PGK2P07205 417 aa12.15□□□□□ -0.46
RDH11-209ENST00000557273 ITGB8P26012 769 aa12.15□□□□□ -0.46
RDH11-209ENST00000557273 SLFNL1Q499Z3 407 aa12.15□□□□□ -0.46
RDH11-209ENST00000557273 SBK1Q52WX2 424 aa12.15□□□□□ -0.46
RDH11-209ENST00000557273 ZSCAN25Q6NSZ9 544 aa12.15□□□□□ -0.46
RDH11-209ENST00000557273 GIMAP6Q6P9H5 292 aa12.15□□□□□ -0.46
RDH11-209ENST00000557273 FERMT2Q96AC1 680 aa12.15□□□□□ -0.46
RDH11-209ENST00000557273 TEX13BQ9BXU2 312 aa12.15□□□□□ -0.46
RDH11-209ENST00000557273 CHMP4BQ9H444 224 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms