RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 SLAMF8Q9P0V8 285 aa6.86□□□□□ -1.31
ATXN3-246ENST00000557030 DUSP13Q9UII6 198 aa6.86□□□□□ -1.31
ATXN3-246ENST00000557030 TNIKQ9UKE5 1360 aa6.85□□□□□ -1.31
ATXN3-246ENST00000557030 HPXP02790 462 aa6.85□□□□□ -1.31
ATXN3-246ENST00000557030 ZGLP1P0C6A0 271 aa6.85□□□□□ -1.31
ATXN3-246ENST00000557030 ACRP10323 421 aa6.85□□□□□ -1.31
ATXN3-246ENST00000557030 HDLBPQ00341 1268 aaKnown RBP6.85□□□□□ -1.31
ATXN3-246ENST00000557030 TEKQ02763 1124 aa6.85□□□□□ -1.31
ATXN3-246ENST00000557030 RAD51AP2Q09MP3 1159 aa6.85□□□□□ -1.31
ATXN3-246ENST00000557030 TAB3Q8N5C8 712 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-246ENST00000557030 RBBP8NLQ8NC74 664 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-246ENST00000557030 SYTL5Q8TDW5 730 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-246ENST00000557030 SLC9A7Q96T83 725 aa6.85□□□□□ -1.31
ATXN3-246ENST00000557030 EBF1Q9UH73 591 aa6.85□□□□□ -1.31
ATXN3-246ENST00000557030 PCDHA11Q9Y5I1 949 aa6.85□□□□□ -1.31
ATXN3-246ENST00000557030 THOC2Q8NI27 1593 aaKnown RBP6.84□□□□□ -1.31
ATXN3-246ENST00000557030 GLI1P08151 1106 aa6.84□□□□□ -1.31
ATXN3-246ENST00000557030 MCM4P33991 863 aa6.84□□□□□ -1.31
ATXN3-246ENST00000557030 RNF4P78317 190 aa6.84□□□□□ -1.31
ATXN3-246ENST00000557030 EGR3Q06889 387 aa6.84□□□□□ -1.31
ATXN3-246ENST00000557030 MESP2Q0VG99 397 aa6.84□□□□□ -1.31
ATXN3-246ENST00000557030 KCNMB1Q16558 191 aa6.84□□□□□ -1.31
ATXN3-246ENST00000557030 TTC6Q86TZ1 520 aa6.84□□□□□ -1.31
ATXN3-246ENST00000557030 KIRREL1Q96J84 757 aa6.84□□□□□ -1.31
ATXN3-246ENST00000557030 IMPDH2P12268 514 aa6.83□□□□□ -1.32
ATXN3-246ENST00000557030 ERVFC1P60507 584 aa6.83□□□□□ -1.32
ATXN3-246ENST00000557030 NMIQ13287 307 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-246ENST00000557030 SNW1Q13573 536 aaKnown RBP6.83□□□□□ -1.32
ATXN3-246ENST00000557030 NT5DC4Q86YG4 428 aa6.83□□□□□ -1.32
ATXN3-246ENST00000557030 USHBP1Q8N6Y0 703 aa6.83□□□□□ -1.32
ATXN3-246ENST00000557030 DAGLBQ8NCG7 672 aa6.83□□□□□ -1.32
ATXN3-246ENST00000557030 RASGRP4Q8TDF6 673 aa6.83□□□□□ -1.32
ATXN3-246ENST00000557030 G6PC3Q9BUM1 346 aa6.83□□□□□ -1.32
ATXN3-246ENST00000557030 CLEC3AO75596 197 aa6.82□□□□□ -1.32
ATXN3-246ENST00000557030 C8AP07357 584 aa6.82□□□□□ -1.32
ATXN3-246ENST00000557030 NR0B2Q15466 257 aa6.82□□□□□ -1.32
ATXN3-246ENST00000557030 TMC3Q7Z5M5 1100 aa6.82□□□□□ -1.32
ATXN3-246ENST00000557030 ZNF654Q8IZM8 581 aa6.82□□□□□ -1.32
ATXN3-246ENST00000557030 PDZD8Q8NEN9 1154 aa6.82□□□□□ -1.32
ATXN3-246ENST00000557030 LINC01599Q8WXQ3 324 aa6.82□□□□□ -1.32
ATXN3-246ENST00000557030 FAM53CQ9NYF3 392 aa6.82□□□□□ -1.32
ATXN3-246ENST00000557030 CEP162Q5TB80 1403 aa6.82□□□□□ -1.32
ATXN3-246ENST00000557030 YBX3P16989 372 aaKnown RBP eCLIP6.81□□□□□ -1.32
ATXN3-246ENST00000557030 SOX9P48436 509 aa6.81□□□□□ -1.32
ATXN3-246ENST00000557030 PAK2Q13177 524 aa6.81□□□□□ -1.32
ATXN3-246ENST00000557030 COL9A2Q14055 689 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-246ENST00000557030 ZNF655Q8N720 491 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-246ENST00000557030 LIN37Q96GY3 246 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-246ENST00000557030 SLC6A18Q96N87 628 aa6.81□□□□□ -1.32
ATXN3-246ENST00000557030 PRDM14Q9GZV8 571 aa6.81□□□□□ -1.32
ATXN3-246ENST00000557030 GOLGA3Q08378 1498 aa6.8□□□□□ -1.32
ATXN3-246ENST00000557030 TOP2BQ02880 1626 aa6.8□□□□□ -1.32
ATXN3-246ENST00000557030 BIVM-ERCC5R4GMW8 1640 aa6.8□□□□□ -1.32
ATXN3-246ENST00000557030 SHOXO15266 292 aa6.8□□□□□ -1.32
ATXN3-246ENST00000557030 SIGLEC6O43699 453 aa6.8□□□□□ -1.32
ATXN3-246ENST00000557030 LTKP29376 864 aa6.8□□□□□ -1.32
ATXN3-246ENST00000557030 GJA8P48165 433 aa6.8□□□□□ -1.32
ATXN3-246ENST00000557030 TMEM67Q5HYA8 995 aa6.8□□□□□ -1.32
ATXN3-246ENST00000557030 RNF111Q6ZNA4 994 aa6.8□□□□□ -1.32
ATXN3-246ENST00000557030 TCTN2Q96GX1 697 aa6.8□□□□□ -1.32
ATXN3-246ENST00000557030 ZNF512BQ96KM6 892 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-246ENST00000557030 TM9SF2Q99805 663 aa6.8□□□□□ -1.32
ATXN3-246ENST00000557030 PRR13Q9NZ81 148 aa6.8□□□□□ -1.32
ATXN3-246ENST00000557030 SUCOQ9UBS9 1254 aaKnown RBP6.8□□□□□ -1.32
ATXN3-246ENST00000557030 PPT2Q9UMR5 302 aa6.8□□□□□ -1.32
ATXN3-246ENST00000557030 KIF21BO75037 1637 aa6.79□□□□□ -1.32
ATXN3-246ENST00000557030 TMEM82A0PJX8 343 aa6.79□□□□□ -1.32
ATXN3-246ENST00000557030 NOTOA8MTQ0 251 aa6.79□□□□□ -1.32
ATXN3-246ENST00000557030 FARP2O94887 1054 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-246ENST00000557030 HK2P52789 917 aa6.79□□□□□ -1.32
ATXN3-246ENST00000557030 ZNF648Q5T619 568 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-246ENST00000557030 LINC00116Q8NCU8 138 aa6.79□□□□□ -1.32
ATXN3-246ENST00000557030 MYLIPQ8WY64 445 aa6.79□□□□□ -1.32
ATXN3-246ENST00000557030 KRTAP9-9Q9BYP9 154 aa6.79□□□□□ -1.32
ATXN3-246ENST00000557030 KRTAP9-4Q9BYQ2 154 aa6.79□□□□□ -1.32
ATXN3-246ENST00000557030 GINM1Q9NU53 330 aa6.79□□□□□ -1.32
ATXN3-246ENST00000557030 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-246ENST00000557030 CFTRP13569 1480 aa6.79□□□□□ -1.32
ATXN3-246ENST00000557030 LRRC10BA6NIK2 292 aa6.78□□□□□ -1.32
ATXN3-246ENST00000557030 C9IYK1 514 aa6.78□□□□□ -1.32
ATXN3-246ENST00000557030 PRAMEF1O95521 474 aa6.78□□□□□ -1.32
ATXN3-246ENST00000557030 ZYXQ15942 572 aaKnown RBP6.78□□□□□ -1.32
ATXN3-246ENST00000557030 CLEC16AQ2KHT3 1053 aa6.78□□□□□ -1.32
ATXN3-246ENST00000557030 BBS9Q3SYG4 887 aa6.78□□□□□ -1.32
ATXN3-246ENST00000557030 TIGD5Q53EQ6 642 aa6.78□□□□□ -1.32
ATXN3-246ENST00000557030 LSRQ86X29 649 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-246ENST00000557030 LILRA2Q8N149 483 aa6.78□□□□□ -1.32
ATXN3-246ENST00000557030 BHLHE22Q8NFJ8 381 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-246ENST00000557030 ABHD4Q8TB40 342 aa6.78□□□□□ -1.32
ATXN3-246ENST00000557030 DHX38Q92620 1227 aaKnown RBP6.78□□□□□ -1.32
ATXN3-246ENST00000557030 SHISA4Q96DD7 197 aa6.78□□□□□ -1.32
ATXN3-246ENST00000557030 SPATA32Q96LK8 384 aa6.78□□□□□ -1.32
ATXN3-246ENST00000557030 CEP164Q9UPV0 1460 aa6.78□□□□□ -1.32
ATXN3-246ENST00000557030 CUX1P39880 1505 aa6.77□□□□□ -1.33
ATXN3-246ENST00000557030 FITM1A5D6W6 292 aa6.77□□□□□ -1.33
ATXN3-246ENST00000557030 EFEMP2O95967 443 aa6.77□□□□□ -1.33
ATXN3-246ENST00000557030 RAC2P15153 192 aa6.77□□□□□ -1.33
ATXN3-246ENST00000557030 CTSKP43235 329 aa6.77□□□□□ -1.33
ATXN3-246ENST00000557030 CEBPAP49715 358 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-246ENST00000557030 PMS1P54277 932 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms