RNA–Protein interactions for RNA: ENST00000556975.5

TMEM260-214, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-214ENST00000556975 SYNPO2Q9UMS6 1093 aa27■■□□□ 1.91
TMEM260-214ENST00000556975 F5H6K3 240 aa26.99■■□□□ 1.91
TMEM260-214ENST00000556975 ERCC3P19447 782 aa26.99■■□□□ 1.91
TMEM260-214ENST00000556975 NUCB1Q02818 461 aa26.99■■□□□ 1.91
TMEM260-214ENST00000556975 KLRC3Q07444 240 aa26.99■■□□□ 1.91
TMEM260-214ENST00000556975 B4GALNT3Q6L9W6 998 aa26.99■■□□□ 1.91
TMEM260-214ENST00000556975 NEDD1Q8NHV4 660 aa26.99■■□□□ 1.91
TMEM260-214ENST00000556975 OSBPL3Q9H4L5 887 aa26.99■■□□□ 1.91
TMEM260-214ENST00000556975 MTMR4Q9NYA4 1195 aa26.99■■□□□ 1.91
TMEM260-214ENST00000556975 PPP1R9AQ9ULJ8 1098 aa26.99■■□□□ 1.91
TMEM260-214ENST00000556975 SUPT16HQ9Y5B9 1047 aaKnown RBP26.99■■□□□ 1.91
TMEM260-214ENST00000556975 PLIN4Q96Q06 1357 aa26.98■■□□□ 1.91
TMEM260-214ENST00000556975 TMEM132BQ14DG7 1078 aa26.98■■□□□ 1.91
TMEM260-214ENST00000556975 FAM83BQ5T0W9 1011 aa26.98■■□□□ 1.91
TMEM260-214ENST00000556975 DPF3Q92784 378 aa26.98■■□□□ 1.91
TMEM260-214ENST00000556975 FBXO28Q9NVF7 368 aa26.98■■□□□ 1.91
TMEM260-214ENST00000556975 CLIP2Q9UDT6 1046 aa26.98■■□□□ 1.91
TMEM260-214ENST00000556975 OGDHLQ9ULD0 1010 aa26.98■■□□□ 1.91
TMEM260-214ENST00000556975 IGHA2P01877 340 aa26.97■■□□□ 1.91
TMEM260-214ENST00000556975 ALX1Q15699 326 aa26.97■■□□□ 1.91
TMEM260-214ENST00000556975 MCMDC2Q4G0Z9 681 aa26.97■■□□□ 1.91
TMEM260-214ENST00000556975 PLEKHM2Q8IWE5 1019 aa26.97■■□□□ 1.91
TMEM260-214ENST00000556975 ABRAQ8N0Z2 381 aa26.97■■□□□ 1.91
TMEM260-214ENST00000556975 NPLOC4Q8TAT6 608 aa26.97■■□□□ 1.91
TMEM260-214ENST00000556975 CEP95Q96GE4 821 aa26.97■■□□□ 1.91
TMEM260-214ENST00000556975 FLRT1Q9NZU1 646 aa26.97■■□□□ 1.91
TMEM260-214ENST00000556975 ZNF236Q9UL36 1845 aa26.97■■□□□ 1.91
TMEM260-214ENST00000556975 VWA5AO00534 786 aa26.96■■□□□ 1.91
TMEM260-214ENST00000556975 SLC25A27O95847 323 aa26.96■■□□□ 1.91
TMEM260-214ENST00000556975 TTLL1O95922 423 aa26.96■■□□□ 1.91
TMEM260-214ENST00000556975 NDUFB10O96000 172 aa26.96■■□□□ 1.91
TMEM260-214ENST00000556975 PLS1Q14651 629 aa26.96■■□□□ 1.91
TMEM260-214ENST00000556975 VPS53Q5VIR6 699 aa26.96■■□□□ 1.91
TMEM260-214ENST00000556975 MFSD14CQ5VZR4 134 aa26.96■■□□□ 1.91
TMEM260-214ENST00000556975 ANAPC4Q9UJX5 808 aa26.96■■□□□ 1.91
TMEM260-214ENST00000556975 RAD21O60216 631 aa26.95■■□□□ 1.9
TMEM260-214ENST00000556975 TSPY3P0CV98 308 aa26.95■■□□□ 1.9
TMEM260-214ENST00000556975 TSPY8P0CW00 308 aa26.95■■□□□ 1.9
TMEM260-214ENST00000556975 ADORA2AP29274 412 aa26.95■■□□□ 1.9
TMEM260-214ENST00000556975 TFAP4Q01664 338 aa26.95■■□□□ 1.9
TMEM260-214ENST00000556975 NECAB2Q7Z6G3 386 aa26.95■■□□□ 1.9
TMEM260-214ENST00000556975 DPP9Q86TI2 863 aa26.95■■□□□ 1.9
TMEM260-214ENST00000556975 PAWRQ96IZ0 340 aaKnown RBP26.95■■□□□ 1.9
TMEM260-214ENST00000556975 FAM227BQ96M60 508 aa26.95■■□□□ 1.9
TMEM260-214ENST00000556975 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.95■■□□□ 1.9
TMEM260-214ENST00000556975 MYH4Q9Y623 1939 aa26.94■■□□□ 1.9
TMEM260-214ENST00000556975 A0A0D9SFI3 127 aa26.94■■□□□ 1.9
TMEM260-214ENST00000556975 H0YGN5 161 aa26.94■■□□□ 1.9
TMEM260-214ENST00000556975 CCND3P30281 292 aaPredicted RBP26.94■■□□□ 1.9
TMEM260-214ENST00000556975 MNX1P50219 401 aaPredicted RBP26.94■■□□□ 1.9
TMEM260-214ENST00000556975 LHX8Q68G74 356 aa26.94■■□□□ 1.9
TMEM260-214ENST00000556975 SAMD1Q6SPF0 538 aaPredicted RBP26.94■■□□□ 1.9
TMEM260-214ENST00000556975 NCAPG2Q86XI2 1143 aa26.94■■□□□ 1.9
TMEM260-214ENST00000556975 RIOX2Q8IUF8 465 aa26.94■■□□□ 1.9
TMEM260-214ENST00000556975 REPS2Q8NFH8 660 aa26.94■■□□□ 1.9
TMEM260-214ENST00000556975 COL11A1P12107 1806 aaPredicted RBP26.93■■□□□ 1.9
TMEM260-214ENST00000556975 TRIM6-TRIM34B2RNG4 842 aa26.93■■□□□ 1.9
TMEM260-214ENST00000556975 FAM47AQ5JRC9 791 aa26.93■■□□□ 1.9
TMEM260-214ENST00000556975 OLFML2BQ68BL8 750 aa26.93■■□□□ 1.9
TMEM260-214ENST00000556975 GMCL1P1Q8NEA9 526 aa26.93■■□□□ 1.9
TMEM260-214ENST00000556975 NUP88Q99567 741 aaPredicted RBP26.93■■□□□ 1.9
TMEM260-214ENST00000556975 SLF1Q9BQI6 1058 aa26.93■■□□□ 1.9
TMEM260-214ENST00000556975 ZNF214Q9UL59 606 aaPredicted RBP26.93■■□□□ 1.9
TMEM260-214ENST00000556975 COLQQ9Y215 455 aaPredicted RBP26.93■■□□□ 1.9
TMEM260-214ENST00000556975 COBLO75128 1261 aa26.92■■□□□ 1.9
TMEM260-214ENST00000556975 STAT3P40763 770 aa26.92■■□□□ 1.9
TMEM260-214ENST00000556975 PPP4R3BQ5MIZ7 849 aa26.92■■□□□ 1.9
TMEM260-214ENST00000556975 PRPF38AQ8NAV1 312 aaKnown RBP26.92■■□□□ 1.9
TMEM260-214ENST00000556975 DIS3LQ8TF46 1054 aaKnown RBP26.92■■□□□ 1.9
TMEM260-214ENST00000556975 RILPL2Q969X0 211 aa26.92■■□□□ 1.9
TMEM260-214ENST00000556975 SLC5A4Q9NY91 659 aa26.92■■□□□ 1.9
TMEM260-214ENST00000556975 FGRP09769 529 aa26.91■■□□□ 1.9
TMEM260-214ENST00000556975 FCER1AP12319 257 aa26.91■■□□□ 1.9
TMEM260-214ENST00000556975 COPB2P35606 906 aa26.91■■□□□ 1.9
TMEM260-214ENST00000556975 CTDSPL2Q05D32 466 aa26.91■■□□□ 1.9
TMEM260-214ENST00000556975 NMIQ13287 307 aaPredicted RBP26.91■■□□□ 1.9
TMEM260-214ENST00000556975 NBPF3Q9H094 633 aa26.91■■□□□ 1.9
TMEM260-214ENST00000556975 NR2E3Q9Y5X4 410 aa26.91■■□□□ 1.9
TMEM260-214ENST00000556975 FGAP02671 866 aa26.9■■□□□ 1.9
TMEM260-214ENST00000556975 HSPD1P10809 573 aaKnown RBP26.9■■□□□ 1.9
TMEM260-214ENST00000556975 ZNFX1Q9P2E3 1918 aaKnown RBP26.9■■□□□ 1.9
TMEM260-214ENST00000556975 ZMYM6O95789 1325 aa26.9■■□□□ 1.9
TMEM260-214ENST00000556975 ORC4O43929 436 aa26.89■■□□□ 1.9
TMEM260-214ENST00000556975 SDSP20132 328 aa26.89■■□□□ 1.9
TMEM260-214ENST00000556975 CYP2C19P33261 490 aa26.89■■□□□ 1.9
TMEM260-214ENST00000556975 FXR1P51114 621 aaKnown RBP eCLIP26.89■■□□□ 1.9
TMEM260-214ENST00000556975 INCENPQ9NQS7 918 aa26.89■■□□□ 1.9
TMEM260-214ENST00000556975 FEM1BQ9UK73 627 aa26.89■■□□□ 1.9
TMEM260-214ENST00000556975 TACC3Q9Y6A5 838 aa26.89■■□□□ 1.9
TMEM260-214ENST00000556975 TSPY2A6NKD2 308 aa26.88■■□□□ 1.89
TMEM260-214ENST00000556975 ATP2A1O14983 1001 aa26.88■■□□□ 1.89
TMEM260-214ENST00000556975 MSCO60682 206 aa26.88■■□□□ 1.89
TMEM260-214ENST00000556975 NOVP48745 357 aa26.88■■□□□ 1.89
TMEM260-214ENST00000556975 SLFN13Q68D06 897 aa26.88■■□□□ 1.89
TMEM260-214ENST00000556975 ZNF589Q86UQ0 364 aaPredicted RBP26.88■■□□□ 1.89
TMEM260-214ENST00000556975 LRRC47Q8N1G4 583 aaKnown RBP26.88■■□□□ 1.89
TMEM260-214ENST00000556975 CCDC171Q6TFL3 1326 aa26.88■■□□□ 1.89
TMEM260-214ENST00000556975 MMP19Q99542 508 aa26.87■■□□□ 1.89
TMEM260-214ENST00000556975 TEX13BQ9BXU2 312 aa26.87■■□□□ 1.89
TMEM260-214ENST00000556975 C11orf49Q9H6J7 331 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms