RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 INHAP05111 366 aa12.29□□□□□ -0.44
SNX6-208ENST00000556712 CYP2B6P20813 491 aa12.29□□□□□ -0.44
SNX6-208ENST00000556712 CHMLP26374 656 aa12.29□□□□□ -0.44
SNX6-208ENST00000556712 MAPK4P31152 587 aa12.29□□□□□ -0.44
SNX6-208ENST00000556712 RGS19P49795 217 aa12.29□□□□□ -0.44
SNX6-208ENST00000556712 MLLT1Q03111 559 aaPredicted RBP12.29□□□□□ -0.44
SNX6-208ENST00000556712 TRIM32Q13049 653 aa12.29□□□□□ -0.44
SNX6-208ENST00000556712 IRF5Q13568 498 aa12.29□□□□□ -0.44
SNX6-208ENST00000556712 PLS1Q14651 629 aa12.29□□□□□ -0.44
SNX6-208ENST00000556712 CCAR1Q8IX12 1150 aaKnown RBP12.29□□□□□ -0.44
SNX6-208ENST00000556712 STAG1Q8WVM7 1258 aa12.29□□□□□ -0.44
SNX6-208ENST00000556712 MOV10L1Q9BXT6 1211 aaKnown RBP12.29□□□□□ -0.44
SNX6-208ENST00000556712 CWC22Q9HCG8 908 aaKnown RBP12.29□□□□□ -0.44
SNX6-208ENST00000556712 STX8Q9UNK0 236 aa12.29□□□□□ -0.44
SNX6-208ENST00000556712 KIAA0100Q14667 2235 aaKnown RBP12.28□□□□□ -0.44
SNX6-208ENST00000556712 FGRP09769 529 aa12.28□□□□□ -0.44
SNX6-208ENST00000556712 EN2P19622 333 aaPredicted RBP12.28□□□□□ -0.44
SNX6-208ENST00000556712 CCNA1P78396 465 aa12.28□□□□□ -0.44
SNX6-208ENST00000556712 AKNAD1Q5T1N1 836 aa12.28□□□□□ -0.44
SNX6-208ENST00000556712 PLEKHH3Q7Z736 793 aa12.28□□□□□ -0.44
SNX6-208ENST00000556712 TRIB2Q92519 343 aa12.28□□□□□ -0.44
SNX6-208ENST00000556712 MKL1Q969V6 931 aa12.28□□□□□ -0.44
SNX6-208ENST00000556712 DSCC1Q9BVC3 393 aa12.28□□□□□ -0.44
SNX6-208ENST00000556712 SPATC1LQ9H0A9 340 aa12.28□□□□□ -0.44
SNX6-208ENST00000556712 UNC93B1Q9H1C4 597 aa12.28□□□□□ -0.44
SNX6-208ENST00000556712 PPP1R9AQ9ULJ8 1098 aa12.28□□□□□ -0.44
SNX6-208ENST00000556712 ISY1Q9ULR0 285 aaKnown RBP12.28□□□□□ -0.44
SNX6-208ENST00000556712 MTMR7Q9Y216 660 aa12.28□□□□□ -0.44
SNX6-208ENST00000556712 RAD50Q92878 1312 aa12.28□□□□□ -0.44
SNX6-208ENST00000556712 FRMPD3Q5JV73 1810 aa12.27□□□□□ -0.44
SNX6-208ENST00000556712 CCL5P13501 91 aa12.27□□□□□ -0.45
SNX6-208ENST00000556712 UBXN2AP68543 259 aa12.27□□□□□ -0.45
SNX6-208ENST00000556712 TMEM132BQ14DG7 1078 aa12.27□□□□□ -0.45
SNX6-208ENST00000556712 CCL14Q16627 93 aa12.27□□□□□ -0.45
SNX6-208ENST00000556712 MORN1Q5T089 497 aa12.27□□□□□ -0.45
SNX6-208ENST00000556712 SLFN13Q68D06 897 aa12.27□□□□□ -0.45
SNX6-208ENST00000556712 GMCL1P1Q8NEA9 526 aa12.27□□□□□ -0.45
SNX6-208ENST00000556712 PXYLP1Q8TE99 480 aa12.27□□□□□ -0.45
SNX6-208ENST00000556712 SOCS4Q8WXH5 440 aa12.27□□□□□ -0.45
SNX6-208ENST00000556712 CCDC136Q96JN2 1154 aa12.27□□□□□ -0.45
SNX6-208ENST00000556712 NUDT12Q9BQG2 462 aa12.27□□□□□ -0.45
SNX6-208ENST00000556712 SLF1Q9BQI6 1058 aa12.27□□□□□ -0.45
SNX6-208ENST00000556712 HOXC10Q9NYD6 342 aa12.27□□□□□ -0.45
SNX6-208ENST00000556712 PLXNA1Q9UIW2 1896 aa12.27□□□□□ -0.45
SNX6-208ENST00000556712 VWA5AO00534 786 aa12.26□□□□□ -0.45
SNX6-208ENST00000556712 ZNF213O14771 459 aa12.26□□□□□ -0.45
SNX6-208ENST00000556712 NEFLP07196 543 aa12.26□□□□□ -0.45
SNX6-208ENST00000556712 ERCC3P19447 782 aa12.26□□□□□ -0.45
SNX6-208ENST00000556712 HOXD11P31277 338 aaPredicted RBP12.26□□□□□ -0.45
SNX6-208ENST00000556712 PTH1RQ03431 593 aa12.26□□□□□ -0.45
SNX6-208ENST00000556712 MFSD6Q6ZSS7 791 aa12.26□□□□□ -0.45
SNX6-208ENST00000556712 NCAPG2Q86XI2 1143 aa12.26□□□□□ -0.45
SNX6-208ENST00000556712 MB21D1Q8N884 522 aa12.26□□□□□ -0.45
SNX6-208ENST00000556712 REPS2Q8NFH8 660 aa12.26□□□□□ -0.45
SNX6-208ENST00000556712 USP6NLQ92738 828 aa12.26□□□□□ -0.45
SNX6-208ENST00000556712 KIFC2Q96AC6 838 aa12.26□□□□□ -0.45
SNX6-208ENST00000556712 SHISA4Q96DD7 197 aa12.26□□□□□ -0.45
SNX6-208ENST00000556712 APBA2Q99767 749 aa12.26□□□□□ -0.45
SNX6-208ENST00000556712 ZKSCAN3Q9BRR0 538 aa12.26□□□□□ -0.45
SNX6-208ENST00000556712 TMEM106CQ9BVX2 250 aa12.26□□□□□ -0.45
SNX6-208ENST00000556712 ZNFX1Q9P2E3 1918 aaKnown RBP12.26□□□□□ -0.45
SNX6-208ENST00000556712 TNRC18O15417 2968 aaPredicted RBP12.26□□□□□ -0.45
SNX6-208ENST00000556712 B4E1Z4 1266 aa12.25□□□□□ -0.45
SNX6-208ENST00000556712 SGSM2O43147 1006 aa12.25□□□□□ -0.45
SNX6-208ENST00000556712 HMGCRP04035 888 aa12.25□□□□□ -0.45
SNX6-208ENST00000556712 BMP3P12645 472 aa12.25□□□□□ -0.45
SNX6-208ENST00000556712 PTPREP23469 700 aa12.25□□□□□ -0.45
SNX6-208ENST00000556712 MCCP23508 829 aa12.25□□□□□ -0.45
SNX6-208ENST00000556712 RGS2P41220 211 aa12.25□□□□□ -0.45
SNX6-208ENST00000556712 SLC1A4P43007 532 aa12.25□□□□□ -0.45
SNX6-208ENST00000556712 MAP2K5Q13163 448 aa12.25□□□□□ -0.45
SNX6-208ENST00000556712 GRB14Q14449 540 aa12.25□□□□□ -0.45
SNX6-208ENST00000556712 IMMTQ16891 758 aaKnown RBP12.25□□□□□ -0.45
SNX6-208ENST00000556712 KCTD1Q719H9 257 aa12.25□□□□□ -0.45
SNX6-208ENST00000556712 RNF208Q9H0X6 261 aa12.25□□□□□ -0.45
SNX6-208ENST00000556712 RNF41Q9H4P4 317 aaPredicted RBP12.25□□□□□ -0.45
SNX6-208ENST00000556712 ZNF214Q9UL59 606 aaPredicted RBP12.25□□□□□ -0.45
SNX6-208ENST00000556712 SYNPO2Q9UMS6 1093 aa12.25□□□□□ -0.45
SNX6-208ENST00000556712 ADAMTS5Q9UNA0 930 aa12.25□□□□□ -0.45
SNX6-208ENST00000556712 TAF6LQ9Y6J9 622 aa12.25□□□□□ -0.45
SNX6-208ENST00000556712 IVNS1ABPQ9Y6Y0 642 aa12.25□□□□□ -0.45
SNX6-208ENST00000556712 SLC15A5A6NIM6 579 aa12.24□□□□□ -0.45
SNX6-208ENST00000556712 TMEM232C9JQI7 657 aa12.24□□□□□ -0.45
SNX6-208ENST00000556712 KDM4AO75164 1064 aa12.24□□□□□ -0.45
SNX6-208ENST00000556712 ZKSCAN1P17029 563 aaPredicted RBP12.24□□□□□ -0.45
SNX6-208ENST00000556712 ADORA2AP29274 412 aa12.24□□□□□ -0.45
SNX6-208ENST00000556712 NOVP48745 357 aa12.24□□□□□ -0.45
SNX6-208ENST00000556712 IKQ13123 557 aaPredicted RBP12.24□□□□□ -0.45
SNX6-208ENST00000556712 CCDC96Q2M329 555 aa12.24□□□□□ -0.45
SNX6-208ENST00000556712 FRMPD2Q68DX3 1309 aaPredicted RBP12.24□□□□□ -0.45
SNX6-208ENST00000556712 RCSD1Q6JBY9 416 aa12.24□□□□□ -0.45
SNX6-208ENST00000556712 NPLOC4Q8TAT6 608 aa12.24□□□□□ -0.45
SNX6-208ENST00000556712 RUFY2Q8WXA3 655 aa12.24□□□□□ -0.45
SNX6-208ENST00000556712 ESR2Q92731 530 aa12.24□□□□□ -0.45
SNX6-208ENST00000556712 GMCL1Q96IK5 515 aa12.24□□□□□ -0.45
SNX6-208ENST00000556712 TMEM47Q9BQJ4 181 aa12.24□□□□□ -0.45
SNX6-208ENST00000556712 FLRT1Q9NZU1 646 aa12.24□□□□□ -0.45
SNX6-208ENST00000556712 FEM1BQ9UK73 627 aa12.24□□□□□ -0.45
SNX6-208ENST00000556712 PCP11498 1178 aaKnown RBP12.23□□□□□ -0.45
SNX6-208ENST00000556712 PRKAR2AP13861 404 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms