RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 HPSEQ9Y251 543 aa20.99■□□□□ 0.95
SDR39U1-220ENST00000556548 HDLBPQ00341 1268 aaKnown RBP20.99■□□□□ 0.95
SDR39U1-220ENST00000556548 CEP131Q9UPN4 1083 aa20.99■□□□□ 0.95
SDR39U1-220ENST00000556548 ZBTB12Q9Y330 459 aaPredicted RBP20.99■□□□□ 0.95
SDR39U1-220ENST00000556548 BIN1O00499 593 aa20.98■□□□□ 0.95
SDR39U1-220ENST00000556548 PTPREP23469 700 aa20.98■□□□□ 0.95
SDR39U1-220ENST00000556548 KCNH3Q9ULD8 1083 aa20.98■□□□□ 0.95
SDR39U1-220ENST00000556548 PSMD14O00487 310 aa20.98■□□□□ 0.95
SDR39U1-220ENST00000556548 CLCN1P35523 988 aa20.98■□□□□ 0.95
SDR39U1-220ENST00000556548 STX1AQ16623 288 aa20.98■□□□□ 0.95
SDR39U1-220ENST00000556548 ISM2Q6H9L7 571 aa20.98■□□□□ 0.95
SDR39U1-220ENST00000556548 BLIDQ8IZY5 108 aa20.98■□□□□ 0.95
SDR39U1-220ENST00000556548 KIAA1468Q9P260 1216 aa20.98■□□□□ 0.95
SDR39U1-220ENST00000556548 NOL7Q9UMY1 257 aaKnown RBP20.98■□□□□ 0.95
SDR39U1-220ENST00000556548 IGKV6D-41A0A0C4DH26 115 aa20.97■□□□□ 0.95
SDR39U1-220ENST00000556548 PDHBP11177 359 aa20.97■□□□□ 0.95
SDR39U1-220ENST00000556548 NOVP48745 357 aa20.97■□□□□ 0.95
SDR39U1-220ENST00000556548 LONRF3Q496Y0 759 aa20.97■□□□□ 0.95
SDR39U1-220ENST00000556548 TTC38Q5R3I4 469 aa20.97■□□□□ 0.95
SDR39U1-220ENST00000556548 CSRNP2Q9H175 543 aa20.97■□□□□ 0.95
SDR39U1-220ENST00000556548 GPCPD1Q9NPB8 672 aa20.97■□□□□ 0.95
SDR39U1-220ENST00000556548 RAD21O60216 631 aa20.96■□□□□ 0.95
SDR39U1-220ENST00000556548 TTLL1O95922 423 aa20.96■□□□□ 0.95
SDR39U1-220ENST00000556548 USP49Q70CQ1 688 aa20.96■□□□□ 0.95
SDR39U1-220ENST00000556548 LZTS2Q9BRK4 669 aa20.96■□□□□ 0.95
SDR39U1-220ENST00000556548 IDI2Q9BXS1 227 aa20.96■□□□□ 0.95
SDR39U1-220ENST00000556548 SRPRBQ9Y5M8 271 aaKnown RBP20.96■□□□□ 0.95
SDR39U1-220ENST00000556548 PLIN4Q96Q06 1357 aa20.96■□□□□ 0.95
SDR39U1-220ENST00000556548 ESPNB1AK53 854 aa20.96■□□□□ 0.95
SDR39U1-220ENST00000556548 STXBP3O00186 592 aa20.96■□□□□ 0.95
SDR39U1-220ENST00000556548 PTMAP06454 111 aaKnown RBP20.96■□□□□ 0.95
SDR39U1-220ENST00000556548 PIGSQ96S52 555 aa20.96■□□□□ 0.95
SDR39U1-220ENST00000556548 PSMD1Q99460 953 aa20.96■□□□□ 0.95
SDR39U1-220ENST00000556548 BARHL2Q9NY43 387 aa20.96■□□□□ 0.95
SDR39U1-220ENST00000556548 PCDHA4Q9UN74 947 aa20.96■□□□□ 0.95
SDR39U1-220ENST00000556548 CALML3P27482 149 aa20.95■□□□□ 0.94
SDR39U1-220ENST00000556548 PDILTQ8N807 584 aa20.95■□□□□ 0.94
SDR39U1-220ENST00000556548 SPZ1Q9BXG8 430 aa20.95■□□□□ 0.94
SDR39U1-220ENST00000556548 TRIM34Q9BYJ4 488 aa20.95■□□□□ 0.94
SDR39U1-220ENST00000556548 PI4KBQ9UBF8 816 aa20.95■□□□□ 0.94
SDR39U1-220ENST00000556548 CLRN2A0PK11 232 aa20.95■□□□□ 0.94
SDR39U1-220ENST00000556548 MCM7P33993 719 aa20.95■□□□□ 0.94
SDR39U1-220ENST00000556548 RSBN1LQ6PCB5 846 aaPredicted RBP20.95■□□□□ 0.94
SDR39U1-220ENST00000556548 DHX36Q9H2U1 1008 aaKnown RBP20.95■□□□□ 0.94
SDR39U1-220ENST00000556548 SH3GLB2Q9NR46 395 aa20.95■□□□□ 0.94
SDR39U1-220ENST00000556548 COL4A5P29400 1685 aa20.95■□□□□ 0.94
SDR39U1-220ENST00000556548 ZNF646O15015 1829 aaPredicted RBP20.95■□□□□ 0.94
SDR39U1-220ENST00000556548 POLR2DO15514 142 aaKnown RBP20.94■□□□□ 0.94
SDR39U1-220ENST00000556548 PNOCQ13519 176 aa20.94■□□□□ 0.94
SDR39U1-220ENST00000556548 RRP36Q96EU6 259 aaKnown RBP20.94■□□□□ 0.94
SDR39U1-220ENST00000556548 EHD4Q9H223 541 aa20.94■□□□□ 0.94
SDR39U1-220ENST00000556548 ANO10Q9NW15 660 aa20.94■□□□□ 0.94
SDR39U1-220ENST00000556548 TCP10L2B9ZVM9 353 aa20.94■□□□□ 0.94
SDR39U1-220ENST00000556548 NAPAP54920 295 aa20.94■□□□□ 0.94
SDR39U1-220ENST00000556548 PTGDRQ13258 359 aa20.94■□□□□ 0.94
SDR39U1-220ENST00000556548 ZRSR1Q15695 479 aaKnown RBP20.94■□□□□ 0.94
SDR39U1-220ENST00000556548 CERKLQ49MI3 558 aaPredicted RBP20.94■□□□□ 0.94
SDR39U1-220ENST00000556548 CNNM3Q8NE01 707 aa20.94■□□□□ 0.94
SDR39U1-220ENST00000556548 FAM13BQ9NYF5 915 aa20.94■□□□□ 0.94
SDR39U1-220ENST00000556548 SEC63Q9UGP8 760 aaKnown RBP20.94■□□□□ 0.94
SDR39U1-220ENST00000556548 FAM237AA0A1B0GTK4 181 aa20.93■□□□□ 0.94
SDR39U1-220ENST00000556548 FOXN1O15353 648 aa20.93■□□□□ 0.94
SDR39U1-220ENST00000556548 PIM2Q9P1W9 311 aa20.93■□□□□ 0.94
SDR39U1-220ENST00000556548 GDF11O95390 407 aa20.93■□□□□ 0.94
SDR39U1-220ENST00000556548 DPCR1Q3MIW9 517 aa20.93■□□□□ 0.94
SDR39U1-220ENST00000556548 TTBK2Q6IQ55 1244 aa20.93■□□□□ 0.94
SDR39U1-220ENST00000556548 EPSTI1Q96J88 318 aa20.93■□□□□ 0.94
SDR39U1-220ENST00000556548 TIGD1Q96MW7 591 aa20.93■□□□□ 0.94
SDR39U1-220ENST00000556548 PCDHA6Q9UN73 950 aa20.93■□□□□ 0.94
SDR39U1-220ENST00000556548 PCDHA8Q9Y5H6 950 aa20.93■□□□□ 0.94
SDR39U1-220ENST00000556548 IQCB1Q15051 598 aa20.92■□□□□ 0.94
SDR39U1-220ENST00000556548 KRBA2Q6ZNG9 492 aa20.92■□□□□ 0.94
SDR39U1-220ENST00000556548 KCTD1Q719H9 257 aa20.92■□□□□ 0.94
SDR39U1-220ENST00000556548 CCDC148Q8NFR7 591 aa20.92■□□□□ 0.94
SDR39U1-220ENST00000556548 MYH8P13535 1937 aa20.92■□□□□ 0.94
SDR39U1-220ENST00000556548 CCDC194A0A1B0GVG4 234 aa20.92■□□□□ 0.94
SDR39U1-220ENST00000556548 VWA3AA6NCI4 1184 aa20.92■□□□□ 0.94
SDR39U1-220ENST00000556548 GRIPAP1Q4V328 841 aa20.92■□□□□ 0.94
SDR39U1-220ENST00000556548 METTL16Q86W50 562 aaKnown RBP20.92■□□□□ 0.94
SDR39U1-220ENST00000556548 MYO3BQ8WXR4 1341 aa20.91■□□□□ 0.94
SDR39U1-220ENST00000556548 VIL1P09327 827 aaKnown RBP20.91■□□□□ 0.94
SDR39U1-220ENST00000556548 SLC16A2P36021 539 aa20.91■□□□□ 0.94
SDR39U1-220ENST00000556548 CCDC96Q2M329 555 aa20.91■□□□□ 0.94
SDR39U1-220ENST00000556548 SERTAD1Q9UHV2 236 aa20.91■□□□□ 0.94
SDR39U1-220ENST00000556548 SMCO2A6NFE2 343 aa20.9■□□□□ 0.94
SDR39U1-220ENST00000556548 GOLGA6L19H0YKK7 550 aa20.9■□□□□ 0.94
SDR39U1-220ENST00000556548 M0R2N6 131 aa20.9■□□□□ 0.94
SDR39U1-220ENST00000556548 SEPT2Q15019 361 aa20.9■□□□□ 0.94
SDR39U1-220ENST00000556548 R3HDM1Q15032 1099 aaKnown RBP20.9■□□□□ 0.94
SDR39U1-220ENST00000556548 INF2Q27J81 1249 aa20.9■□□□□ 0.94
SDR39U1-220ENST00000556548 NIM1KQ8IY84 436 aa20.9■□□□□ 0.94
SDR39U1-220ENST00000556548 GRAMD1CQ8IYS0 662 aa20.9■□□□□ 0.94
SDR39U1-220ENST00000556548 ZNF579Q8NAF0 562 aaKnown RBP20.9■□□□□ 0.94
SDR39U1-220ENST00000556548 SPC24Q8NBT2 197 aa20.9■□□□□ 0.94
SDR39U1-220ENST00000556548 CCDC17Q96LX7 622 aa20.9■□□□□ 0.94
SDR39U1-220ENST00000556548 SPDYE2BA6NHP3 402 aa20.9■□□□□ 0.94
SDR39U1-220ENST00000556548 BECN2A8MW95 431 aa20.9■□□□□ 0.94
SDR39U1-220ENST00000556548 SPDYE6P0CI01 402 aa20.9■□□□□ 0.94
SDR39U1-220ENST00000556548 EEF2P13639 858 aaKnown RBP20.9■□□□□ 0.94
SDR39U1-220ENST00000556548 POLD1P28340 1107 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms