RNA–Protein interactions for RNA: ENST00000556523.1

SDR39U1-219, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-219ENST00000556523 ATP11BQ9Y2G3 1177 aa21.18■□□□□ 0.98
SDR39U1-219ENST00000556523 IGHA2P01877 340 aa21.17■□□□□ 0.98
SDR39U1-219ENST00000556523 EEF2P13639 858 aaKnown RBP21.17■□□□□ 0.98
SDR39U1-219ENST00000556523 SIAH1Q8IUQ4 282 aa21.17■□□□□ 0.98
SDR39U1-219ENST00000556523 COL11A1P12107 1806 aaPredicted RBP21.16■□□□□ 0.98
SDR39U1-219ENST00000556523 TMEM132BQ14DG7 1078 aa21.16■□□□□ 0.98
SDR39U1-219ENST00000556523 MAML3Q96JK9 1138 aa21.16■□□□□ 0.98
SDR39U1-219ENST00000556523 MMP19Q99542 508 aa21.16■□□□□ 0.98
SDR39U1-219ENST00000556523 SMIM22K7EJ46 135 aa21.15■□□□□ 0.98
SDR39U1-219ENST00000556523 CHGBP05060 677 aa21.15■□□□□ 0.98
SDR39U1-219ENST00000556523 COPB2P35606 906 aa21.15■□□□□ 0.98
SDR39U1-219ENST00000556523 KCTD2Q14681 263 aa21.15■□□□□ 0.98
SDR39U1-219ENST00000556523 CTR9Q6PD62 1173 aa21.15■□□□□ 0.98
SDR39U1-219ENST00000556523 GPATCH3Q96I76 525 aa21.15■□□□□ 0.98
SDR39U1-219ENST00000556523 SMARCA5O60264 1052 aaPredicted RBP21.14■□□□□ 0.97
SDR39U1-219ENST00000556523 RIOX2Q8IUF8 465 aa21.14■□□□□ 0.97
SDR39U1-219ENST00000556523 PUS7LQ9H0K6 701 aaKnown RBP21.14■□□□□ 0.97
SDR39U1-219ENST00000556523 PRDM5Q9NQX1 630 aaPredicted RBP21.14■□□□□ 0.97
SDR39U1-219ENST00000556523 ECHDC1Q9NTX5 307 aa21.14■□□□□ 0.97
SDR39U1-219ENST00000556523 FBXO28Q9NVF7 368 aa21.14■□□□□ 0.97
SDR39U1-219ENST00000556523 MTMR10Q9NXD2 777 aa21.14■□□□□ 0.97
SDR39U1-219ENST00000556523 PPP1R9AQ9ULJ8 1098 aa21.14■□□□□ 0.97
SDR39U1-219ENST00000556523 STXBP5LQ9Y2K9 1186 aa21.14■□□□□ 0.97
SDR39U1-219ENST00000556523 LTBP2Q14767 1821 aa21.13■□□□□ 0.97
SDR39U1-219ENST00000556523 PRAMEF19Q5SWL8 479 aa21.13■□□□□ 0.97
SDR39U1-219ENST00000556523 FAM83BQ5T0W9 1011 aa21.13■□□□□ 0.97
SDR39U1-219ENST00000556523 SLC39A5Q6ZMH5 540 aa21.13■□□□□ 0.97
SDR39U1-219ENST00000556523 NRBP1Q9UHY1 535 aa21.13■□□□□ 0.97
SDR39U1-219ENST00000556523 ZNFX1Q9P2E3 1918 aaKnown RBP21.13■□□□□ 0.97
SDR39U1-219ENST00000556523 VWA5AO00534 786 aa21.12■□□□□ 0.97
SDR39U1-219ENST00000556523 DLL1O00548 723 aa21.12■□□□□ 0.97
SDR39U1-219ENST00000556523 RARBP10826 455 aa21.12■□□□□ 0.97
SDR39U1-219ENST00000556523 STAT3P40763 770 aa21.12■□□□□ 0.97
SDR39U1-219ENST00000556523 LRRC41Q15345 812 aa21.12■□□□□ 0.97
SDR39U1-219ENST00000556523 TRIM60Q495X7 471 aa21.12■□□□□ 0.97
SDR39U1-219ENST00000556523 FAM47AQ5JRC9 791 aa21.12■□□□□ 0.97
SDR39U1-219ENST00000556523 MKNK2Q9HBH9 465 aa21.12■□□□□ 0.97
SDR39U1-219ENST00000556523 PLXNA1Q9UIW2 1896 aa21.11■□□□□ 0.97
SDR39U1-219ENST00000556523 PGK2P07205 417 aa21.11■□□□□ 0.97
SDR39U1-219ENST00000556523 ADCYAP1R1P41586 468 aa21.11■□□□□ 0.97
SDR39U1-219ENST00000556523 XPNPEP3Q9NQH7 507 aa21.11■□□□□ 0.97
SDR39U1-219ENST00000556523 ADAMTS5Q9UNA0 930 aa21.11■□□□□ 0.97
SDR39U1-219ENST00000556523 GREB1LQ9C091 1923 aaPredicted RBP21.11■□□□□ 0.97
SDR39U1-219ENST00000556523 SBK1Q52WX2 424 aa21.1■□□□□ 0.97
SDR39U1-219ENST00000556523 GIMAP6Q6P9H5 292 aa21.1■□□□□ 0.97
SDR39U1-219ENST00000556523 STK11IPQ8N1F8 1099 aa21.1■□□□□ 0.97
SDR39U1-219ENST00000556523 KBTBD3Q8NAB2 608 aa21.1■□□□□ 0.97
SDR39U1-219ENST00000556523 APPBP2Q92624 585 aa21.1■□□□□ 0.97
SDR39U1-219ENST00000556523 FERMT2Q96AC1 680 aa21.1■□□□□ 0.97
SDR39U1-219ENST00000556523 STRBPQ96SI9 672 aaKnown RBP21.1■□□□□ 0.97
SDR39U1-219ENST00000556523 SLF1Q9BQI6 1058 aa21.1■□□□□ 0.97
SDR39U1-219ENST00000556523 ZNF214Q9UL59 606 aaPredicted RBP21.1■□□□□ 0.97
SDR39U1-219ENST00000556523 DIS3Q9Y2L1 958 aaKnown RBP21.1■□□□□ 0.97
SDR39U1-219ENST00000556523 CTDP1Q9Y5B0 961 aaPredicted RBP21.1■□□□□ 0.97
SDR39U1-219ENST00000556523 ROBO3Q96MS0 1386 aa21.1■□□□□ 0.97
SDR39U1-219ENST00000556523 MINDY4BA8MYZ0 360 aa21.09■□□□□ 0.97
SDR39U1-219ENST00000556523 TDO2P48775 406 aa21.09■□□□□ 0.97
SDR39U1-219ENST00000556523 SNX17Q15036 470 aa21.09■□□□□ 0.97
SDR39U1-219ENST00000556523 C20orf194Q5TEA3 1177 aa21.09■□□□□ 0.97
SDR39U1-219ENST00000556523 RNF180Q86T96 592 aa21.09■□□□□ 0.97
SDR39U1-219ENST00000556523 TINF2Q9BSI4 451 aa21.09■□□□□ 0.97
SDR39U1-219ENST00000556523 TEX13BQ9BXU2 312 aa21.09■□□□□ 0.97
SDR39U1-219ENST00000556523 CNPY2Q9Y2B0 182 aa21.09■□□□□ 0.97
SDR39U1-219ENST00000556523 RASA1P20936 1047 aa21.08■□□□□ 0.97
SDR39U1-219ENST00000556523 ZNF792Q3KQV3 632 aa21.08■□□□□ 0.97
SDR39U1-219ENST00000556523 NUP88Q99567 741 aaPredicted RBP21.08■□□□□ 0.97
SDR39U1-219ENST00000556523 ZNF287Q9HBT7 754 aa21.08■□□□□ 0.97
SDR39U1-219ENST00000556523 PDLIM7Q9NR12 457 aa21.08■□□□□ 0.97
SDR39U1-219ENST00000556523 NYAP2Q9P242 653 aa21.08■□□□□ 0.97
SDR39U1-219ENST00000556523 COL6A3P12111 3177 aa21.07■□□□□ 0.96
SDR39U1-219ENST00000556523 GSG1L2A8MUP6 293 aa21.07■□□□□ 0.96
SDR39U1-219ENST00000556523 ZFYP08048 801 aaPredicted RBP21.07■□□□□ 0.96
SDR39U1-219ENST00000556523 AKR1A1P14550 325 aa21.07■□□□□ 0.96
SDR39U1-219ENST00000556523 GNAT2P19087 354 aa21.07■□□□□ 0.96
SDR39U1-219ENST00000556523 LRRFIP1Q32MZ4 808 aaKnown RBP21.07■□□□□ 0.96
SDR39U1-219ENST00000556523 FAM109BQ6ICB4 259 aaPredicted RBP21.07■□□□□ 0.96
SDR39U1-219ENST00000556523 SNRNP48Q6IEG0 339 aaKnown RBP21.07■□□□□ 0.96
SDR39U1-219ENST00000556523 REPS2Q8NFH8 660 aa21.07■□□□□ 0.96
SDR39U1-219ENST00000556523 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.07■□□□□ 0.96
SDR39U1-219ENST00000556523 PHF24Q9UPV7 400 aa21.07■□□□□ 0.96
SDR39U1-219ENST00000556523 MYH4Q9Y623 1939 aa21.06■□□□□ 0.96
SDR39U1-219ENST00000556523 SMCHD1A6NHR9 2005 aa21.06■□□□□ 0.96
SDR39U1-219ENST00000556523 RNF113AO15541 343 aaKnown RBP21.06■□□□□ 0.96
SDR39U1-219ENST00000556523 GPAA1O43292 621 aa21.06■□□□□ 0.96
SDR39U1-219ENST00000556523 NDUFB10O96000 172 aa21.06■□□□□ 0.96
SDR39U1-219ENST00000556523 PGK1P00558 417 aa21.06■□□□□ 0.96
SDR39U1-219ENST00000556523 APPP05067 770 aa21.06■□□□□ 0.96
SDR39U1-219ENST00000556523 ZNF697Q5TEC3 545 aa21.06■□□□□ 0.96
SDR39U1-219ENST00000556523 C1orf53Q5VUE5 145 aa21.06■□□□□ 0.96
SDR39U1-219ENST00000556523 OSBP2Q969R2 916 aa21.06■□□□□ 0.96
SDR39U1-219ENST00000556523 DDX11Q96FC9 970 aa21.06■□□□□ 0.96
SDR39U1-219ENST00000556523 DNAH12Q6ZR08 3092 aa21.06■□□□□ 0.96
SDR39U1-219ENST00000556523 F5H6K3 240 aa21.05■□□□□ 0.96
SDR39U1-219ENST00000556523 SLC4A3P48751 1232 aa21.05■□□□□ 0.96
SDR39U1-219ENST00000556523 KLRC3Q07444 240 aa21.05■□□□□ 0.96
SDR39U1-219ENST00000556523 TSHZ3Q63HK5 1081 aa21.05■□□□□ 0.96
SDR39U1-219ENST00000556523 ZNF444Q8N0Y2 327 aaPredicted RBP21.05■□□□□ 0.96
SDR39U1-219ENST00000556523 PRPF38AQ8NAV1 312 aaKnown RBP21.05■□□□□ 0.96
SDR39U1-219ENST00000556523 BADQ92934 168 aa21.05■□□□□ 0.96
SDR39U1-219ENST00000556523 ZBED4O75132 1171 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms