RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 MAP3K5Q99683 1374 aa6.06□□□□□ -1.44
ATXN3-238ENST00000556288 C4BP0C0L5 1744 aa6.06□□□□□ -1.44
ATXN3-238ENST00000556288 DLL1O00548 723 aa6.06□□□□□ -1.44
ATXN3-238ENST00000556288 SOX1O00570 391 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-238ENST00000556288 GIPC1O14908 333 aa6.06□□□□□ -1.44
ATXN3-238ENST00000556288 CANXP27824 592 aaKnown RBP6.06□□□□□ -1.44
ATXN3-238ENST00000556288 PCDH1Q08174 1060 aa6.06□□□□□ -1.44
ATXN3-238ENST00000556288 TAF7Q15545 349 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-238ENST00000556288 NFE2L2Q16236 605 aa6.06□□□□□ -1.44
ATXN3-238ENST00000556288 ZNF827Q17R98 1081 aa6.06□□□□□ -1.44
ATXN3-238ENST00000556288 IGF2-ASQ6U949 168 aa6.06□□□□□ -1.44
ATXN3-238ENST00000556288 KLHL23Q8NBE8 558 aa6.06□□□□□ -1.44
ATXN3-238ENST00000556288 WNT8BQ93098 351 aa6.06□□□□□ -1.44
ATXN3-238ENST00000556288 RUNDC1Q96C34 613 aa6.06□□□□□ -1.44
ATXN3-238ENST00000556288 KLHDC7BQ96G42 594 aa6.06□□□□□ -1.44
ATXN3-238ENST00000556288 THUMPD2Q9BTF0 503 aaKnown RBP6.06□□□□□ -1.44
ATXN3-238ENST00000556288 OSBPL7Q9BZF2 842 aa6.06□□□□□ -1.44
ATXN3-238ENST00000556288 CLEC4MQ9H2X3 399 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-238ENST00000556288 KDM6AO15550 1401 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-238ENST00000556288 QSER1Q2KHR3 1735 aa6.05□□□□□ -1.44
ATXN3-238ENST00000556288 C9orf172C9J069 976 aa6.05□□□□□ -1.44
ATXN3-238ENST00000556288 APAF1O14727 1248 aa6.05□□□□□ -1.44
ATXN3-238ENST00000556288 KCNQ3O43525 872 aa6.05□□□□□ -1.44
ATXN3-238ENST00000556288 ESRRAP11474 423 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-238ENST00000556288 SELPP16109 830 aa6.05□□□□□ -1.44
ATXN3-238ENST00000556288 ITPKAP23677 461 aa6.05□□□□□ -1.44
ATXN3-238ENST00000556288 CD68P34810 354 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-238ENST00000556288 RFC4P35249 363 aa6.05□□□□□ -1.44
ATXN3-238ENST00000556288 TMPOP42166 694 aaKnown RBP6.05□□□□□ -1.44
ATXN3-238ENST00000556288 TAGLNQ01995 201 aaKnown RBP6.05□□□□□ -1.44
ATXN3-238ENST00000556288 C19orf57Q0VDD7 668 aa6.05□□□□□ -1.44
ATXN3-238ENST00000556288 ITPK1Q13572 414 aa6.05□□□□□ -1.44
ATXN3-238ENST00000556288 HGSNATQ68CP4 663 aa6.05□□□□□ -1.44
ATXN3-238ENST00000556288 DIEXFQ68CQ4 756 aaKnown RBP6.05□□□□□ -1.44
ATXN3-238ENST00000556288 FBXO33Q7Z6M2 555 aa6.05□□□□□ -1.44
ATXN3-238ENST00000556288 COL23A1Q86Y22 540 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-238ENST00000556288 DNAJC10Q8IXB1 793 aa6.05□□□□□ -1.44
ATXN3-238ENST00000556288 NGEFQ8N5V2 710 aa6.05□□□□□ -1.44
ATXN3-238ENST00000556288 LINC00116Q8NCU8 138 aa6.05□□□□□ -1.44
ATXN3-238ENST00000556288 FRMD6Q96NE9 622 aa6.05□□□□□ -1.44
ATXN3-238ENST00000556288 BCL2L13Q9BXK5 485 aa6.05□□□□□ -1.44
ATXN3-238ENST00000556288 KRTAP4-7Q9BYR0 210 aa6.05□□□□□ -1.44
ATXN3-238ENST00000556288 SEMA6BQ9H3T3 888 aa6.05□□□□□ -1.44
ATXN3-238ENST00000556288 ZNF576Q9H609 170 aa6.05□□□□□ -1.44
ATXN3-238ENST00000556288 OSGEPQ9NPF4 335 aa6.05□□□□□ -1.44
ATXN3-238ENST00000556288 RNF19AQ9NV58 838 aa6.05□□□□□ -1.44
ATXN3-238ENST00000556288 PARP2Q9UGN5 583 aa6.05□□□□□ -1.44
ATXN3-238ENST00000556288 AKAP2Q9Y2D5 859 aa6.05□□□□□ -1.44
ATXN3-238ENST00000556288 COL5A3P25940 1745 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-238ENST00000556288 CACNA1SQ13698 1873 aa6.05□□□□□ -1.44
ATXN3-238ENST00000556288 C1QTNF9BB2RNN3 333 aa6.04□□□□□ -1.44
ATXN3-238ENST00000556288 DDX3YO15523 660 aaKnown RBP6.04□□□□□ -1.44
ATXN3-238ENST00000556288 HTATSF1O43719 755 aaKnown RBP6.04□□□□□ -1.44
ATXN3-238ENST00000556288 XRCC5P13010 732 aaKnown RBP6.04□□□□□ -1.44
ATXN3-238ENST00000556288 POLD1P28340 1107 aa6.04□□□□□ -1.44
ATXN3-238ENST00000556288 GNA15P30679 374 aa6.04□□□□□ -1.44
ATXN3-238ENST00000556288 GSTT1P30711 240 aa6.04□□□□□ -1.44
ATXN3-238ENST00000556288 CHRNA4P43681 627 aa6.04□□□□□ -1.44
ATXN3-238ENST00000556288 NRG1Q02297 640 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-238ENST00000556288 GSTM4Q03013 218 aa6.04□□□□□ -1.44
ATXN3-238ENST00000556288 PTPN12Q05209 780 aaKnown RBP6.04□□□□□ -1.44
ATXN3-238ENST00000556288 PSMD2Q13200 908 aa6.04□□□□□ -1.44
ATXN3-238ENST00000556288 ZNF423Q2M1K9 1284 aa6.04□□□□□ -1.44
ATXN3-238ENST00000556288 FOXD4L6Q3SYB3 417 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-238ENST00000556288 ZNF790Q6PG37 636 aa6.04□□□□□ -1.44
ATXN3-238ENST00000556288 FOXD4L3Q6VB84 417 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-238ENST00000556288 CD163Q86VB7 1156 aa6.04□□□□□ -1.44
ATXN3-238ENST00000556288 FLAD1Q8NFF5 587 aa6.04□□□□□ -1.44
ATXN3-238ENST00000556288 LENG1Q96BZ8 264 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-238ENST00000556288 FMNL2Q96PY5 1086 aa6.04□□□□□ -1.44
ATXN3-238ENST00000556288 PLEKHF1Q96S99 279 aa6.04□□□□□ -1.44
ATXN3-238ENST00000556288 SRCIN1Q9C0H9 1055 aa6.04□□□□□ -1.44
ATXN3-238ENST00000556288 ZFYVE1Q9HBF4 777 aa6.04□□□□□ -1.44
ATXN3-238ENST00000556288 CCDC88AQ3V6T2 1871 aa6.04□□□□□ -1.44
ATXN3-238ENST00000556288 NUP98P52948 1817 aa6.04□□□□□ -1.44
ATXN3-238ENST00000556288 CASZ1Q86V15 1759 aa6.03□□□□□ -1.44
ATXN3-238ENST00000556288 UBR2Q8IWV8 1755 aa6.03□□□□□ -1.44
ATXN3-238ENST00000556288 TJP1Q07157 1748 aa6.03□□□□□ -1.44
ATXN3-238ENST00000556288 STARD3NLO95772 234 aa6.03□□□□□ -1.44
ATXN3-238ENST00000556288 A1BGP04217 495 aa6.03□□□□□ -1.44
ATXN3-238ENST00000556288 EIF2S2P20042 333 aaKnown RBP6.03□□□□□ -1.44
ATXN3-238ENST00000556288 EIF4BP23588 611 aaKnown RBP6.03□□□□□ -1.44
ATXN3-238ENST00000556288 CRKLP46109 303 aaKnown RBP6.03□□□□□ -1.44
ATXN3-238ENST00000556288 PIP4K2AP48426 406 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-238ENST00000556288 ZNF157P51786 506 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-238ENST00000556288 NLRP12P59046 1061 aa6.03□□□□□ -1.44
ATXN3-238ENST00000556288 LMOD3Q0VAK6 560 aa6.03□□□□□ -1.44
ATXN3-238ENST00000556288 RPS26P11Q5JNZ5 115 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-238ENST00000556288 GIPC2Q8TF65 315 aa6.03□□□□□ -1.44
ATXN3-238ENST00000556288 ZNF496Q96IT1 587 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-238ENST00000556288 MRPL18Q9H0U6 180 aaKnown RBP6.03□□□□□ -1.44
ATXN3-238ENST00000556288 C12orf49Q9H741 205 aa6.03□□□□□ -1.44
ATXN3-238ENST00000556288 GOLGA2P5Q9HBQ8 144 aa6.03□□□□□ -1.44
ATXN3-238ENST00000556288 KCNK4Q9NYG8 393 aa6.03□□□□□ -1.44
ATXN3-238ENST00000556288 TSPYL4Q9UJ04 414 aa6.03□□□□□ -1.44
ATXN3-238ENST00000556288 N4BP2Q86UW6 1770 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-238ENST00000556288 PNPLA7Q6ZV29 1317 aa6.02□□□□□ -1.45
ATXN3-238ENST00000556288 CACNA1FO60840 1977 aa6.02□□□□□ -1.45
ATXN3-238ENST00000556288 AFDNP55196 1824 aaKnown RBP6.02□□□□□ -1.45
ATXN3-238ENST00000556288 CHD4Q14839 1912 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms