RNA–Protein interactions for RNA: ENST00000556264.1

SPTLC2-204, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-204ENST00000556264 MRGPRX3Q96LB0 322 aa5.62□□□□□ -1.51
SPTLC2-204ENST00000556264 CEP89Q96ST8 783 aa5.62□□□□□ -1.51
SPTLC2-204ENST00000556264 TARS2Q9BW92 718 aaKnown RBP5.62□□□□□ -1.51
SPTLC2-204ENST00000556264 CHMP4AQ9BY43 222 aa5.62□□□□□ -1.51
SPTLC2-204ENST00000556264 LGR6Q9HBX8 967 aa5.62□□□□□ -1.51
SPTLC2-204ENST00000556264 CHPF2Q9P2E5 772 aa5.62□□□□□ -1.51
SPTLC2-204ENST00000556264 MAGEC2Q9UBF1 373 aaPredicted RBP5.62□□□□□ -1.51
SPTLC2-204ENST00000556264 FBXL21Q9UKT6 434 aa5.62□□□□□ -1.51
SPTLC2-204ENST00000556264 MAPRE3Q9UPY8 281 aa5.62□□□□□ -1.51
SPTLC2-204ENST00000556264 EMC9Q9Y3B6 208 aa5.62□□□□□ -1.51
SPTLC2-204ENST00000556264 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.61□□□□□ -1.51
SPTLC2-204ENST00000556264 KRBA1A5PL33 1030 aa5.61□□□□□ -1.51
SPTLC2-204ENST00000556264 SHOXO15266 292 aa5.61□□□□□ -1.51
SPTLC2-204ENST00000556264 ALX3O95076 343 aa5.61□□□□□ -1.51
SPTLC2-204ENST00000556264 KCNH1O95259 989 aa5.61□□□□□ -1.51
SPTLC2-204ENST00000556264 ITGA4P13612 1032 aa5.61□□□□□ -1.51
SPTLC2-204ENST00000556264 ELNP15502 786 aa5.61□□□□□ -1.51
SPTLC2-204ENST00000556264 RAB6AP20340 208 aa5.61□□□□□ -1.51
SPTLC2-204ENST00000556264 USP11P51784 963 aa5.61□□□□□ -1.51
SPTLC2-204ENST00000556264 NOL9Q5SY16 702 aaKnown RBP5.61□□□□□ -1.51
SPTLC2-204ENST00000556264 LETMD1Q6P1Q0 360 aa5.61□□□□□ -1.51
SPTLC2-204ENST00000556264 POMZP3Q6PJE2 187 aa5.61□□□□□ -1.51
SPTLC2-204ENST00000556264 LINC00114Q6XXX2 140 aa5.61□□□□□ -1.51
SPTLC2-204ENST00000556264 TRIM59Q8IWR1 403 aa5.61□□□□□ -1.51
SPTLC2-204ENST00000556264 ARHGEF39Q8N4T4 335 aa5.61□□□□□ -1.51
SPTLC2-204ENST00000556264 SLC7A14Q8TBB6 771 aa5.61□□□□□ -1.51
SPTLC2-204ENST00000556264 BTN2A2Q8WVV5 523 aa5.61□□□□□ -1.51
SPTLC2-204ENST00000556264 JDP2Q8WYK2 163 aa5.61□□□□□ -1.51
SPTLC2-204ENST00000556264 BRF1Q92994 677 aa5.61□□□□□ -1.51
SPTLC2-204ENST00000556264 MIPEPQ99797 713 aa5.61□□□□□ -1.51
SPTLC2-204ENST00000556264 COL17A1Q9UMD9 1497 aaPredicted RBP5.61□□□□□ -1.51
SPTLC2-204ENST00000556264 BLACEA4D250 179 aa5.6□□□□□ -1.51
SPTLC2-204ENST00000556264 F8W735 103 aaPredicted RBP5.6□□□□□ -1.51
SPTLC2-204ENST00000556264 SART1O43290 800 aaKnown RBP5.6□□□□□ -1.51
SPTLC2-204ENST00000556264 DLX3O60479 287 aa5.6□□□□□ -1.51
SPTLC2-204ENST00000556264 SLITRK5O94991 958 aa5.6□□□□□ -1.51
SPTLC2-204ENST00000556264 GMPRP36959 345 aa5.6□□□□□ -1.51
SPTLC2-204ENST00000556264 ZNF445P59923 1031 aa5.6□□□□□ -1.51
SPTLC2-204ENST00000556264 SNRPNP63162 240 aaKnown RBP5.6□□□□□ -1.51
SPTLC2-204ENST00000556264 MAP7Q14244 749 aa5.6□□□□□ -1.51
SPTLC2-204ENST00000556264 FAM50AQ14320 339 aaKnown RBP5.6□□□□□ -1.51
SPTLC2-204ENST00000556264 PPP2R5DQ14738 602 aa5.6□□□□□ -1.51
SPTLC2-204ENST00000556264 SF1Q15637 639 aaKnown RBP5.6□□□□□ -1.51
SPTLC2-204ENST00000556264 NBPF9Q3BBW0 867 aa5.6□□□□□ -1.51
SPTLC2-204ENST00000556264 BRDTQ58F21 947 aaPredicted RBP5.6□□□□□ -1.51
SPTLC2-204ENST00000556264 ODR4Q5SWX8 454 aa5.6□□□□□ -1.51
SPTLC2-204ENST00000556264 CCDC181Q5TID7 509 aa5.6□□□□□ -1.51
SPTLC2-204ENST00000556264 TMEM130Q8N3G9 435 aa5.6□□□□□ -1.51
SPTLC2-204ENST00000556264 ATL2Q8NHH9 583 aa5.6□□□□□ -1.51
SPTLC2-204ENST00000556264 DDX1Q92499 740 aaKnown RBP5.6□□□□□ -1.51
SPTLC2-204ENST00000556264 ACSS3Q9H6R3 686 aa5.6□□□□□ -1.51
SPTLC2-204ENST00000556264 ENAMQ9NRM1 1142 aa5.6□□□□□ -1.51
SPTLC2-204ENST00000556264 INTS7Q9NVH2 962 aaKnown RBP5.6□□□□□ -1.51
SPTLC2-204ENST00000556264 CGGBP1Q9UFW8 167 aaPredicted RBP5.6□□□□□ -1.51
SPTLC2-204ENST00000556264 NDOR1Q9UHB4 597 aa5.6□□□□□ -1.51
SPTLC2-204ENST00000556264 SFMBT1Q9UHJ3 866 aa5.6□□□□□ -1.51
SPTLC2-204ENST00000556264 MCM8Q9UJA3 840 aa5.6□□□□□ -1.51
SPTLC2-204ENST00000556264 DAGLAQ9Y4D2 1042 aa5.6□□□□□ -1.51
SPTLC2-204ENST00000556264 PCDHB12Q9Y5F1 795 aa5.6□□□□□ -1.51
SPTLC2-204ENST00000556264 A0A087WZG4 1122 aa5.59□□□□□ -1.51
SPTLC2-204ENST00000556264 ALG1L2C9J202 215 aa5.59□□□□□ -1.51
SPTLC2-204ENST00000556264 RBAK-RBAKDNI3L0D1 243 aa5.59□□□□□ -1.51
SPTLC2-204ENST00000556264 DNAJC8O75937 253 aaPredicted RBP5.59□□□□□ -1.51
SPTLC2-204ENST00000556264 NFICP08651 508 aa5.59□□□□□ -1.51
SPTLC2-204ENST00000556264 C6orf222P0C671 652 aaPredicted RBP5.59□□□□□ -1.51
SPTLC2-204ENST00000556264 KCNJ6P48051 423 aa5.59□□□□□ -1.51
SPTLC2-204ENST00000556264 PREPP48147 710 aa5.59□□□□□ -1.51
SPTLC2-204ENST00000556264 EXOSC10Q01780 885 aaKnown RBP5.59□□□□□ -1.51
SPTLC2-204ENST00000556264 TRIM61Q5EBN2 209 aa5.59□□□□□ -1.51
SPTLC2-204ENST00000556264 WWC2Q6AWC2 1192 aa5.59□□□□□ -1.51
SPTLC2-204ENST00000556264 GTF2IRD2BQ6EKJ0 949 aa5.59□□□□□ -1.51
SPTLC2-204ENST00000556264 CDPF1Q6NVV7 123 aa5.59□□□□□ -1.51
SPTLC2-204ENST00000556264 SHISA2Q6UWI4 295 aa5.59□□□□□ -1.51
SPTLC2-204ENST00000556264 DDX46Q7L014 1031 aaKnown RBP5.59□□□□□ -1.51
SPTLC2-204ENST00000556264 STRA8Q7Z7C7 330 aa5.59□□□□□ -1.51
SPTLC2-204ENST00000556264 GTF2IRD2Q86UP8 949 aa5.59□□□□□ -1.51
SPTLC2-204ENST00000556264 FMNL3Q8IVF7 1028 aa5.59□□□□□ -1.51
SPTLC2-204ENST00000556264 CRACR2BQ8N4Y2 399 aaPredicted RBP5.59□□□□□ -1.51
SPTLC2-204ENST00000556264 LEO1Q8WVC0 666 aaPredicted RBP5.59□□□□□ -1.51
SPTLC2-204ENST00000556264 FBXL18Q96ME1 805 aa5.59□□□□□ -1.51
SPTLC2-204ENST00000556264 NOL6Q9H6R4 1146 aaKnown RBP5.59□□□□□ -1.51
SPTLC2-204ENST00000556264 SLC52A2Q9HAB3 445 aa5.59□□□□□ -1.51
SPTLC2-204ENST00000556264 TRIM39Q9HCM9 518 aa5.59□□□□□ -1.51
SPTLC2-204ENST00000556264 GNB5O14775 395 aa5.58□□□□□ -1.52
SPTLC2-204ENST00000556264 GAS2O43903 313 aaKnown RBP5.58□□□□□ -1.52
SPTLC2-204ENST00000556264 LRRN2O75325 713 aa5.58□□□□□ -1.52
SPTLC2-204ENST00000556264 ETV3P41162 512 aa5.58□□□□□ -1.52
SPTLC2-204ENST00000556264 NEK4P51957 841 aa5.58□□□□□ -1.52
SPTLC2-204ENST00000556264 GABREP78334 506 aa5.58□□□□□ -1.52
SPTLC2-204ENST00000556264 SNW1Q13573 536 aaKnown RBP5.58□□□□□ -1.52
SPTLC2-204ENST00000556264 GRIK4Q16099 956 aa5.58□□□□□ -1.52
SPTLC2-204ENST00000556264 HSP90AB2PQ58FF8 381 aa5.58□□□□□ -1.52
SPTLC2-204ENST00000556264 BRAPQ7Z569 592 aa5.58□□□□□ -1.52
SPTLC2-204ENST00000556264 AHI1Q8N157 1196 aa5.58□□□□□ -1.52
SPTLC2-204ENST00000556264 AFAP1L2Q8N4X5 818 aa5.58□□□□□ -1.52
SPTLC2-204ENST00000556264 FIBCD1Q8N539 461 aa5.58□□□□□ -1.52
SPTLC2-204ENST00000556264 SYTL5Q8TDW5 730 aaPredicted RBP5.58□□□□□ -1.52
SPTLC2-204ENST00000556264 FBLIM1Q8WUP2 373 aa5.58□□□□□ -1.52
SPTLC2-204ENST00000556264 RNF141Q8WVD5 230 aa5.58□□□□□ -1.52
SPTLC2-204ENST00000556264 KCTD13Q8WZ19 329 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms