RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 SGPL1O95470 568 aa8.09□□□□□ -1.11
PSEN1-216ENST00000556066 HOXA7P31268 230 aaPredicted RBP8.09□□□□□ -1.11
PSEN1-216ENST00000556066 HERVK_113P62684 666 aa8.09□□□□□ -1.11
PSEN1-216ENST00000556066 ABCB5Q2M3G0 1257 aa8.09□□□□□ -1.11
PSEN1-216ENST00000556066 TSR1Q2NL82 804 aaKnown RBP8.09□□□□□ -1.11
PSEN1-216ENST00000556066 TMED8Q6PL24 325 aaPredicted RBP8.09□□□□□ -1.11
PSEN1-216ENST00000556066 USP17L2Q6R6M4 530 aa8.09□□□□□ -1.11
PSEN1-216ENST00000556066 UBE2Q1Q7Z7E8 422 aa8.09□□□□□ -1.11
PSEN1-216ENST00000556066 KRI1Q8N9T8 703 aaKnown RBP8.09□□□□□ -1.11
PSEN1-216ENST00000556066 GPRC5AQ8NFJ5 357 aa8.09□□□□□ -1.11
PSEN1-216ENST00000556066 SDR42E1Q8WUS8 393 aa8.09□□□□□ -1.11
PSEN1-216ENST00000556066 EHD4Q9H223 541 aa8.09□□□□□ -1.11
PSEN1-216ENST00000556066 CDHR5Q9HBB8 845 aa8.09□□□□□ -1.11
PSEN1-216ENST00000556066 CWC22Q9HCG8 908 aaKnown RBP8.09□□□□□ -1.11
PSEN1-216ENST00000556066 TXNRD2Q9NNW7 524 aa8.09□□□□□ -1.11
PSEN1-216ENST00000556066 CABP5Q9NP86 173 aa8.09□□□□□ -1.11
PSEN1-216ENST00000556066 PAG1Q9NWQ8 432 aa8.09□□□□□ -1.11
PSEN1-216ENST00000556066 SMARCA5O60264 1052 aaPredicted RBP8.08□□□□□ -1.12
PSEN1-216ENST00000556066 HMGCRP04035 888 aa8.08□□□□□ -1.12
PSEN1-216ENST00000556066 CYP2B6P20813 491 aa8.08□□□□□ -1.12
PSEN1-216ENST00000556066 SHMT1P34896 483 aa8.08□□□□□ -1.12
PSEN1-216ENST00000556066 PDE3AQ14432 1141 aa8.08□□□□□ -1.12
PSEN1-216ENST00000556066 SLFNL1Q499Z3 407 aa8.08□□□□□ -1.12
PSEN1-216ENST00000556066 TATDN1Q6P1N9 297 aa8.08□□□□□ -1.12
PSEN1-216ENST00000556066 LCORLQ8N3X6 602 aa8.08□□□□□ -1.12
PSEN1-216ENST00000556066 ACER1Q8TDN7 264 aa8.08□□□□□ -1.12
PSEN1-216ENST00000556066 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.08□□□□□ -1.12
PSEN1-216ENST00000556066 HTATIP2Q9BUP3 242 aa8.08□□□□□ -1.12
PSEN1-216ENST00000556066 LRRCC1Q9C099 1032 aa8.08□□□□□ -1.12
PSEN1-216ENST00000556066 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.08□□□□□ -1.12
PSEN1-216ENST00000556066 ARMT1Q9H993 441 aa8.08□□□□□ -1.12
PSEN1-216ENST00000556066 RBPJLQ9UBG7 517 aa8.08□□□□□ -1.12
PSEN1-216ENST00000556066 MORF4L1Q9UBU8 362 aa8.08□□□□□ -1.12
PSEN1-216ENST00000556066 GJD2Q9UKL4 321 aa8.08□□□□□ -1.12
PSEN1-216ENST00000556066 TCRBV5S4A2TA0A5A2 114 aa8.07□□□□□ -1.12
PSEN1-216ENST00000556066 USP17L15C9J2P7 530 aa8.07□□□□□ -1.12
PSEN1-216ENST00000556066 USP17L13C9JLJ4 530 aa8.07□□□□□ -1.12
PSEN1-216ENST00000556066 USP17L11C9JVI0 530 aa8.07□□□□□ -1.12
PSEN1-216ENST00000556066 USP17L18D6R9N7 530 aa8.07□□□□□ -1.12
PSEN1-216ENST00000556066 USP17L22D6RA61 530 aa8.07□□□□□ -1.12
PSEN1-216ENST00000556066 USP17L17D6RBQ6 530 aa8.07□□□□□ -1.12
PSEN1-216ENST00000556066 USP17L19D6RCP7 530 aa8.07□□□□□ -1.12
PSEN1-216ENST00000556066 USP17L20D6RJB6 530 aa8.07□□□□□ -1.12
PSEN1-216ENST00000556066 PRKAB2O43741 272 aa8.07□□□□□ -1.12
PSEN1-216ENST00000556066 MBD4O95243 580 aa8.07□□□□□ -1.12
PSEN1-216ENST00000556066 CYP2D6P10635 497 aa8.07□□□□□ -1.12
PSEN1-216ENST00000556066 ATP5JP18859 108 aa8.07□□□□□ -1.12
PSEN1-216ENST00000556066 VCAM1P19320 739 aa8.07□□□□□ -1.12
PSEN1-216ENST00000556066 USP14P54578 494 aa8.07□□□□□ -1.12
PSEN1-216ENST00000556066 ERVK-9P63128 1117 aa8.07□□□□□ -1.12
PSEN1-216ENST00000556066 ERVK-24P63145 666 aa8.07□□□□□ -1.12
PSEN1-216ENST00000556066 USP17L24Q0WX57 530 aa8.07□□□□□ -1.12
PSEN1-216ENST00000556066 TRIM32Q13049 653 aa8.07□□□□□ -1.12
PSEN1-216ENST00000556066 SEPT2Q15019 361 aa8.07□□□□□ -1.12
PSEN1-216ENST00000556066 Q3C1V9 767 aa8.07□□□□□ -1.12
PSEN1-216ENST00000556066 C6orf132Q5T0Z8 1188 aa8.07□□□□□ -1.12
PSEN1-216ENST00000556066 WDR78Q5VTH9 848 aa8.07□□□□□ -1.12
PSEN1-216ENST00000556066 SLC44A5Q8NCS7 719 aa8.07□□□□□ -1.12
PSEN1-216ENST00000556066 SLC17A8Q8NDX2 589 aa8.07□□□□□ -1.12
PSEN1-216ENST00000556066 NUDT12Q9BQG2 462 aa8.07□□□□□ -1.12
PSEN1-216ENST00000556066 ADAM33Q9BZ11 813 aa8.07□□□□□ -1.12
PSEN1-216ENST00000556066 KIAA1683Q9H0B3 1180 aa8.07□□□□□ -1.12
PSEN1-216ENST00000556066 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.07□□□□□ -1.12
PSEN1-216ENST00000556066 PORCNQ9H237 461 aa8.07□□□□□ -1.12
PSEN1-216ENST00000556066 HMX1Q9NP08 348 aaPredicted RBP8.07□□□□□ -1.12
PSEN1-216ENST00000556066 DCP1AQ9NPI6 582 aaPredicted RBP8.07□□□□□ -1.12
PSEN1-216ENST00000556066 ALPK3Q96L96 1907 aa8.07□□□□□ -1.12
PSEN1-216ENST00000556066 SOX1O00570 391 aaPredicted RBP8.06□□□□□ -1.12
PSEN1-216ENST00000556066 CHGBP05060 677 aa8.06□□□□□ -1.12
PSEN1-216ENST00000556066 MAPK4P31152 587 aa8.06□□□□□ -1.12
PSEN1-216ENST00000556066 ADD2P35612 726 aa8.06□□□□□ -1.12
PSEN1-216ENST00000556066 KCNC4Q03721 635 aa8.06□□□□□ -1.12
PSEN1-216ENST00000556066 GABPAQ06546 454 aa8.06□□□□□ -1.12
PSEN1-216ENST00000556066 MAP2K5Q13163 448 aa8.06□□□□□ -1.12
PSEN1-216ENST00000556066 GPR142Q7Z601 462 aa8.06□□□□□ -1.12
PSEN1-216ENST00000556066 PLEKHH3Q7Z736 793 aa8.06□□□□□ -1.12
PSEN1-216ENST00000556066 AMOTL1Q8IY63 956 aa8.06□□□□□ -1.12
PSEN1-216ENST00000556066 GTF3C2Q8WUA4 911 aaPredicted RBP8.06□□□□□ -1.12
PSEN1-216ENST00000556066 SOCS4Q8WXH5 440 aa8.06□□□□□ -1.12
PSEN1-216ENST00000556066 TRIB2Q92519 343 aa8.06□□□□□ -1.12
PSEN1-216ENST00000556066 DYNLL2Q96FJ2 89 aa8.06□□□□□ -1.12
PSEN1-216ENST00000556066 DDRGK1Q96HY6 314 aa8.06□□□□□ -1.12
PSEN1-216ENST00000556066 PAWRQ96IZ0 340 aaKnown RBP8.06□□□□□ -1.12
PSEN1-216ENST00000556066 C12orf42Q96LP6 360 aa8.06□□□□□ -1.12
PSEN1-216ENST00000556066 HAUS7Q99871 368 aa8.06□□□□□ -1.12
PSEN1-216ENST00000556066 RPAP3Q9H6T3 665 aaPredicted RBP8.06□□□□□ -1.12
PSEN1-216ENST00000556066 PAK6Q9NQU5 681 aaPredicted RBP8.06□□□□□ -1.12
PSEN1-216ENST00000556066 RABGEF1Q9UJ41 708 aa8.06□□□□□ -1.12
PSEN1-216ENST00000556066 NR2E3Q9Y5X4 410 aa8.06□□□□□ -1.12
PSEN1-216ENST00000556066 RPTORQ8N122 1335 aa8.05□□□□□ -1.12
PSEN1-216ENST00000556066 ZNFX1Q9P2E3 1918 aaKnown RBP8.05□□□□□ -1.12
PSEN1-216ENST00000556066 CYP2D7A0A087X1C5 515 aa8.05□□□□□ -1.12
PSEN1-216ENST00000556066 ZKSCAN1P17029 563 aaPredicted RBP8.05□□□□□ -1.12
PSEN1-216ENST00000556066 FECHP22830 423 aa8.05□□□□□ -1.12
PSEN1-216ENST00000556066 GUCY1A2P33402 732 aa8.05□□□□□ -1.12
PSEN1-216ENST00000556066 RGS2P41220 211 aa8.05□□□□□ -1.12
PSEN1-216ENST00000556066 CCNA1P78396 465 aa8.05□□□□□ -1.12
PSEN1-216ENST00000556066 ATP2B2Q01814 1243 aa8.05□□□□□ -1.12
PSEN1-216ENST00000556066 CCL14Q16627 93 aa8.05□□□□□ -1.12
PSEN1-216ENST00000556066 ZSCAN25Q6NSZ9 544 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms