RNA–Protein interactions for RNA: ENST00000556009.5

NPC2-208, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 5

Gene NPC2, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-208ENST00000556009 SMCHD1A6NHR9 2005 aa21.25■□□□□ 0.99
NPC2-208ENST00000556009 PLS1Q14651 629 aa21.25■□□□□ 0.99
NPC2-208ENST00000556009 NCAPG2Q86XI2 1143 aa21.25■□□□□ 0.99
NPC2-208ENST00000556009 TDHQ8IZJ6 230 aa21.25■□□□□ 0.99
NPC2-208ENST00000556009 KBTBD3Q8NAB2 608 aa21.25■□□□□ 0.99
NPC2-208ENST00000556009 ARRDC4Q8NCT1 418 aa21.25■□□□□ 0.99
NPC2-208ENST00000556009 SENP6Q9GZR1 1112 aaPredicted RBP21.25■□□□□ 0.99
NPC2-208ENST00000556009 FCER1AP12319 257 aa21.24■□□□□ 0.99
NPC2-208ENST00000556009 TMEM132BQ14DG7 1078 aa21.24■□□□□ 0.99
NPC2-208ENST00000556009 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.24■□□□□ 0.99
NPC2-208ENST00000556009 UBE2OQ9C0C9 1292 aaKnown RBP21.24■□□□□ 0.99
NPC2-208ENST00000556009 GOPCQ9HD26 462 aa21.24■□□□□ 0.99
NPC2-208ENST00000556009 MYH4Q9Y623 1939 aa21.23■□□□□ 0.99
NPC2-208ENST00000556009 GSG1L2A8MUP6 293 aa21.23■□□□□ 0.99
NPC2-208ENST00000556009 SEPT4O43236 478 aa21.23■□□□□ 0.99
NPC2-208ENST00000556009 GPATCH3Q96I76 525 aa21.23■□□□□ 0.99
NPC2-208ENST00000556009 MAML3Q96JK9 1138 aa21.23■□□□□ 0.99
NPC2-208ENST00000556009 ZFYP08048 801 aaPredicted RBP21.22■□□□□ 0.99
NPC2-208ENST00000556009 RIOX2Q8IUF8 465 aa21.22■□□□□ 0.99
NPC2-208ENST00000556009 APPBP2Q92624 585 aa21.22■□□□□ 0.99
NPC2-208ENST00000556009 OSBP2Q969R2 916 aa21.22■□□□□ 0.99
NPC2-208ENST00000556009 NRBP1Q9UHY1 535 aa21.22■□□□□ 0.99
NPC2-208ENST00000556009 PPP1R9AQ9ULJ8 1098 aa21.22■□□□□ 0.99
NPC2-208ENST00000556009 VWA5AO00534 786 aa21.21■□□□□ 0.99
NPC2-208ENST00000556009 RNF113AO15541 343 aaKnown RBP21.21■□□□□ 0.99
NPC2-208ENST00000556009 FBXO28Q9NVF7 368 aa21.21■□□□□ 0.99
NPC2-208ENST00000556009 NYAP2Q9P242 653 aa21.21■□□□□ 0.99
NPC2-208ENST00000556009 DIS3Q9Y2L1 958 aaKnown RBP21.21■□□□□ 0.99
NPC2-208ENST00000556009 GNAT2P19087 354 aa21.2■□□□□ 0.98
NPC2-208ENST00000556009 RASA1P20936 1047 aa21.2■□□□□ 0.98
NPC2-208ENST00000556009 COPB2P35606 906 aa21.2■□□□□ 0.98
NPC2-208ENST00000556009 STAT3P40763 770 aa21.2■□□□□ 0.98
NPC2-208ENST00000556009 MKNK2Q9HBH9 465 aa21.2■□□□□ 0.98
NPC2-208ENST00000556009 ZNF214Q9UL59 606 aaPredicted RBP21.2■□□□□ 0.98
NPC2-208ENST00000556009 PRAMEF19Q5SWL8 479 aa21.19■□□□□ 0.98
NPC2-208ENST00000556009 FAM83BQ5T0W9 1011 aa21.19■□□□□ 0.98
NPC2-208ENST00000556009 GJC2Q5T442 439 aaPredicted RBP21.19■□□□□ 0.98
NPC2-208ENST00000556009 REPS2Q8NFH8 660 aa21.19■□□□□ 0.98
NPC2-208ENST00000556009 MMP19Q99542 508 aa21.19■□□□□ 0.98
NPC2-208ENST00000556009 ROBO3Q96MS0 1386 aa21.19■□□□□ 0.98
NPC2-208ENST00000556009 KBTBD13C9JR72 458 aa21.18■□□□□ 0.98
NPC2-208ENST00000556009 ATN1P54259 1190 aaPredicted RBP21.18■□□□□ 0.98
NPC2-208ENST00000556009 MDM2Q00987 491 aaPredicted RBP21.18■□□□□ 0.98
NPC2-208ENST00000556009 KCTD2Q14681 263 aa21.18■□□□□ 0.98
NPC2-208ENST00000556009 LRRFIP1Q32MZ4 808 aaKnown RBP21.18■□□□□ 0.98
NPC2-208ENST00000556009 SAMD1Q6SPF0 538 aaPredicted RBP21.18■□□□□ 0.98
NPC2-208ENST00000556009 SLC39A5Q6ZMH5 540 aa21.18■□□□□ 0.98
NPC2-208ENST00000556009 A0A0C4DFX4 3053 aa21.18■□□□□ 0.98
NPC2-208ENST00000556009 MINDY4BA8MYZ0 360 aa21.17■□□□□ 0.98
NPC2-208ENST00000556009 F5H6K3 240 aa21.17■□□□□ 0.98
NPC2-208ENST00000556009 GPAA1O43292 621 aa21.17■□□□□ 0.98
NPC2-208ENST00000556009 RTP1P59025 263 aa21.17■□□□□ 0.98
NPC2-208ENST00000556009 KLRC3Q07444 240 aa21.17■□□□□ 0.98
NPC2-208ENST00000556009 ZNF792Q3KQV3 632 aa21.17■□□□□ 0.98
NPC2-208ENST00000556009 ANO1Q5XXA6 986 aa21.17■□□□□ 0.98
NPC2-208ENST00000556009 Q7L0L9 218 aa21.17■□□□□ 0.98
NPC2-208ENST00000556009 MKL1Q969V6 931 aa21.17■□□□□ 0.98
NPC2-208ENST00000556009 LBHD1Q9BQE6 289 aaPredicted RBP21.17■□□□□ 0.98
NPC2-208ENST00000556009 ZNF287Q9HBT7 754 aa21.17■□□□□ 0.98
NPC2-208ENST00000556009 SYNPO2Q9UMS6 1093 aa21.17■□□□□ 0.98
NPC2-208ENST00000556009 TTC41PQ6P2S7 1318 aa21.16■□□□□ 0.98
NPC2-208ENST00000556009 IGKV6D-41A0A0C4DH26 115 aa21.16■□□□□ 0.98
NPC2-208ENST00000556009 PATL2C9JE40 543 aaKnown RBP21.16■□□□□ 0.98
NPC2-208ENST00000556009 SNX17Q15036 470 aa21.16■□□□□ 0.98
NPC2-208ENST00000556009 LRRC41Q15345 812 aa21.16■□□□□ 0.98
NPC2-208ENST00000556009 C1orf53Q5VUE5 145 aa21.16■□□□□ 0.98
NPC2-208ENST00000556009 PRPF38AQ8NAV1 312 aaKnown RBP21.16■□□□□ 0.98
NPC2-208ENST00000556009 SLF1Q9BQI6 1058 aa21.16■□□□□ 0.98
NPC2-208ENST00000556009 TINF2Q9BSI4 451 aa21.16■□□□□ 0.98
NPC2-208ENST00000556009 EPB41L4AQ9HCS5 686 aaPredicted RBP21.16■□□□□ 0.98
NPC2-208ENST00000556009 MCM3APO60318 1980 aa21.16■□□□□ 0.98
NPC2-208ENST00000556009 LAMA2P24043 3122 aaKnown RBP21.15■□□□□ 0.98
NPC2-208ENST00000556009 RAD21O60216 631 aa21.15■□□□□ 0.98
NPC2-208ENST00000556009 PGK2P07205 417 aa21.15■□□□□ 0.98
NPC2-208ENST00000556009 TSHZ3Q63HK5 1081 aa21.15■□□□□ 0.98
NPC2-208ENST00000556009 ZNF444Q8N0Y2 327 aaPredicted RBP21.15■□□□□ 0.98
NPC2-208ENST00000556009 DEFB123Q8N688 67 aa21.15■□□□□ 0.98
NPC2-208ENST00000556009 TEX13BQ9BXU2 312 aa21.15■□□□□ 0.98
NPC2-208ENST00000556009 PRKAG2Q9UGJ0 569 aa21.15■□□□□ 0.98
NPC2-208ENST00000556009 ATP2A1O14983 1001 aa21.14■□□□□ 0.97
NPC2-208ENST00000556009 NDUFB10O96000 172 aa21.14■□□□□ 0.97
NPC2-208ENST00000556009 ADCYAP1R1P41586 468 aa21.14■□□□□ 0.97
NPC2-208ENST00000556009 TDO2P48775 406 aa21.14■□□□□ 0.97
NPC2-208ENST00000556009 IFNL3Q8IZI9 196 aa21.14■□□□□ 0.97
NPC2-208ENST00000556009 MSL3Q8N5Y2 521 aaKnown RBP21.14■□□□□ 0.97
NPC2-208ENST00000556009 CLIP2Q9UDT6 1046 aa21.14■□□□□ 0.97
NPC2-208ENST00000556009 ERC2O15083 957 aa21.13■□□□□ 0.97
NPC2-208ENST00000556009 APPP05067 770 aa21.13■□□□□ 0.97
NPC2-208ENST00000556009 RARBP10826 455 aa21.13■□□□□ 0.97
NPC2-208ENST00000556009 FAM47AQ5JRC9 791 aa21.13■□□□□ 0.97
NPC2-208ENST00000556009 STK11IPQ8N1F8 1099 aa21.13■□□□□ 0.97
NPC2-208ENST00000556009 NUP88Q99567 741 aaPredicted RBP21.13■□□□□ 0.97
NPC2-208ENST00000556009 MTMR4Q9NYA4 1195 aa21.13■□□□□ 0.97
NPC2-208ENST00000556009 ATP11BQ9Y2G3 1177 aa21.13■□□□□ 0.97
NPC2-208ENST00000556009 PCDHB15Q9Y5E8 787 aa21.13■□□□□ 0.97
NPC2-208ENST00000556009 M0R2C6 588 aa21.12■□□□□ 0.97
NPC2-208ENST00000556009 ZNF865P0CJ78 1059 aaPredicted RBP21.12■□□□□ 0.97
NPC2-208ENST00000556009 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.12■□□□□ 0.97
NPC2-208ENST00000556009 SLC17A8Q8NDX2 589 aa21.12■□□□□ 0.97
NPC2-208ENST00000556009 PI4K2BQ8TCG2 481 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms