RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 MMP19Q99542 508 aa20.37■□□□□ 0.85
XRCC3-215ENST00000555964 ARPP21Q9UBL0 812 aaPredicted RBP20.37■□□□□ 0.85
XRCC3-215ENST00000555964 USP17L12C9JPN9 530 aa20.36■□□□□ 0.85
XRCC3-215ENST00000555964 USP17L21D6R901 530 aa20.36■□□□□ 0.85
XRCC3-215ENST00000555964 MYCNP04198 464 aaPredicted RBP20.36■□□□□ 0.85
XRCC3-215ENST00000555964 RARBP10826 455 aa20.36■□□□□ 0.85
XRCC3-215ENST00000555964 KCTD2Q14681 263 aa20.36■□□□□ 0.85
XRCC3-215ENST00000555964 KIAA1755Q5JYT7 1200 aa20.36■□□□□ 0.85
XRCC3-215ENST00000555964 C1orf53Q5VUE5 145 aa20.36■□□□□ 0.85
XRCC3-215ENST00000555964 PRDM5Q9NQX1 630 aaPredicted RBP20.36■□□□□ 0.85
XRCC3-215ENST00000555964 DIS3Q9Y2L1 958 aaKnown RBP20.36■□□□□ 0.85
XRCC3-215ENST00000555964 COG6Q9Y2V7 657 aa20.36■□□□□ 0.85
XRCC3-215ENST00000555964 SLC4A4Q9Y6R1 1079 aa20.36■□□□□ 0.85
XRCC3-215ENST00000555964 ROBO3Q96MS0 1386 aa20.35■□□□□ 0.85
XRCC3-215ENST00000555964 PRKAB2O43741 272 aa20.35■□□□□ 0.85
XRCC3-215ENST00000555964 EEF2P13639 858 aaKnown RBP20.35■□□□□ 0.85
XRCC3-215ENST00000555964 TMEM132BQ14DG7 1078 aa20.35■□□□□ 0.85
XRCC3-215ENST00000555964 ZNF697Q5TEC3 545 aa20.35■□□□□ 0.85
XRCC3-215ENST00000555964 RIOX2Q8IUF8 465 aa20.35■□□□□ 0.85
XRCC3-215ENST00000555964 CLEC10AQ8IUN9 316 aa20.35■□□□□ 0.85
XRCC3-215ENST00000555964 ADAMTS5Q9UNA0 930 aa20.35■□□□□ 0.85
XRCC3-215ENST00000555964 GREB1LQ9C091 1923 aaPredicted RBP20.34■□□□□ 0.85
XRCC3-215ENST00000555964 LRRC41Q15345 812 aa20.34■□□□□ 0.85
XRCC3-215ENST00000555964 ANO1Q5XXA6 986 aa20.34■□□□□ 0.85
XRCC3-215ENST00000555964 RNF180Q86T96 592 aa20.34■□□□□ 0.85
XRCC3-215ENST00000555964 SIAH1Q8IUQ4 282 aa20.34■□□□□ 0.85
XRCC3-215ENST00000555964 SIRT2Q8IXJ6 389 aa20.34■□□□□ 0.85
XRCC3-215ENST00000555964 LRRCC1Q9C099 1032 aa20.34■□□□□ 0.85
XRCC3-215ENST00000555964 PPP1R9AQ9ULJ8 1098 aa20.34■□□□□ 0.85
XRCC3-215ENST00000555964 POTEB2H3BUK9 544 aa20.33■□□□□ 0.85
XRCC3-215ENST00000555964 STAT3P40763 770 aa20.33■□□□□ 0.85
XRCC3-215ENST00000555964 TRIM60Q495X7 471 aa20.33■□□□□ 0.85
XRCC3-215ENST00000555964 MIER1Q8N108 512 aa20.33■□□□□ 0.85
XRCC3-215ENST00000555964 XPNPEP3Q9NQH7 507 aa20.33■□□□□ 0.85
XRCC3-215ENST00000555964 MYH4Q9Y623 1939 aa20.33■□□□□ 0.84
XRCC3-215ENST00000555964 VWA5AO00534 786 aa20.32■□□□□ 0.84
XRCC3-215ENST00000555964 RAD21O60216 631 aa20.32■□□□□ 0.84
XRCC3-215ENST00000555964 ADCYAP1R1P41586 468 aa20.32■□□□□ 0.84
XRCC3-215ENST00000555964 FAM47AQ5JRC9 791 aa20.32■□□□□ 0.84
XRCC3-215ENST00000555964 MSL3Q8N5Y2 521 aaKnown RBP20.32■□□□□ 0.84
XRCC3-215ENST00000555964 GPATCH3Q96I76 525 aa20.32■□□□□ 0.84
XRCC3-215ENST00000555964 TINF2Q9BSI4 451 aa20.32■□□□□ 0.84
XRCC3-215ENST00000555964 PHF24Q9UPV7 400 aa20.32■□□□□ 0.84
XRCC3-215ENST00000555964 CNPY2Q9Y2B0 182 aa20.32■□□□□ 0.84
XRCC3-215ENST00000555964 CYP2D7A0A087X1C5 515 aa20.31■□□□□ 0.84
XRCC3-215ENST00000555964 AKR1A1P14550 325 aa20.31■□□□□ 0.84
XRCC3-215ENST00000555964 PRAMEF19Q5SWL8 479 aa20.31■□□□□ 0.84
XRCC3-215ENST00000555964 GIMAP6Q6P9H5 292 aa20.31■□□□□ 0.84
XRCC3-215ENST00000555964 CTR9Q6PD62 1173 aa20.31■□□□□ 0.84
XRCC3-215ENST00000555964 ZNF287Q9HBT7 754 aa20.31■□□□□ 0.84
XRCC3-215ENST00000555964 PDLIM7Q9NR12 457 aa20.31■□□□□ 0.84
XRCC3-215ENST00000555964 FAM83BQ5T0W9 1011 aa20.3■□□□□ 0.84
XRCC3-215ENST00000555964 DIEXFQ68CQ4 756 aaKnown RBP20.3■□□□□ 0.84
XRCC3-215ENST00000555964 SLF1Q9BQI6 1058 aa20.3■□□□□ 0.84
XRCC3-215ENST00000555964 TEX13BQ9BXU2 312 aa20.3■□□□□ 0.84
XRCC3-215ENST00000555964 MKNK2Q9HBH9 465 aa20.3■□□□□ 0.84
XRCC3-215ENST00000555964 FBXO28Q9NVF7 368 aa20.3■□□□□ 0.84
XRCC3-215ENST00000555964 TACC3Q9Y6A5 838 aa20.3■□□□□ 0.84
XRCC3-215ENST00000555964 ZNF792Q3KQV3 632 aa20.29■□□□□ 0.84
XRCC3-215ENST00000555964 SLFNL1Q499Z3 407 aa20.29■□□□□ 0.84
XRCC3-215ENST00000555964 SBK1Q52WX2 424 aa20.29■□□□□ 0.84
XRCC3-215ENST00000555964 BADQ92934 168 aa20.29■□□□□ 0.84
XRCC3-215ENST00000555964 FERMT2Q96AC1 680 aa20.29■□□□□ 0.84
XRCC3-215ENST00000555964 GUCD1Q96NT3 240 aa20.29■□□□□ 0.84
XRCC3-215ENST00000555964 PUS7LQ9H0K6 701 aaKnown RBP20.29■□□□□ 0.84
XRCC3-215ENST00000555964 ECHDC1Q9NTX5 307 aa20.29■□□□□ 0.84
XRCC3-215ENST00000555964 ZNF214Q9UL59 606 aaPredicted RBP20.29■□□□□ 0.84
XRCC3-215ENST00000555964 CTDP1Q9Y5B0 961 aaPredicted RBP20.29■□□□□ 0.84
XRCC3-215ENST00000555964 DNAH12Q6ZR08 3092 aa20.28■□□□□ 0.84
XRCC3-215ENST00000555964 PGK2P07205 417 aa20.28■□□□□ 0.84
XRCC3-215ENST00000555964 CLTBP09497 229 aa20.28■□□□□ 0.84
XRCC3-215ENST00000555964 LRRFIP1Q32MZ4 808 aaKnown RBP20.28■□□□□ 0.84
XRCC3-215ENST00000555964 NYAP2Q9P242 653 aa20.28■□□□□ 0.84
XRCC3-215ENST00000555964 SYNGAP1Q96PV0 1343 aa20.27■□□□□ 0.84
XRCC3-215ENST00000555964 GNAT2P19087 354 aa20.27■□□□□ 0.84
XRCC3-215ENST00000555964 SMAD3P84022 425 aaKnown RBP20.27■□□□□ 0.84
XRCC3-215ENST00000555964 TLE2Q04725 743 aa20.27■□□□□ 0.84
XRCC3-215ENST00000555964 SHHQ15465 462 aa20.27■□□□□ 0.84
XRCC3-215ENST00000555964 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.27■□□□□ 0.84
XRCC3-215ENST00000555964 REPS2Q8NFH8 660 aa20.27■□□□□ 0.84
XRCC3-215ENST00000555964 STRBPQ96SI9 672 aaKnown RBP20.27■□□□□ 0.84
XRCC3-215ENST00000555964 TSEN34Q9BSV6 310 aaKnown RBP20.27■□□□□ 0.84
XRCC3-215ENST00000555964 RCAN3Q9UKA8 241 aa20.27■□□□□ 0.84
XRCC3-215ENST00000555964 PGK1P00558 417 aa20.26■□□□□ 0.83
XRCC3-215ENST00000555964 ZFYP08048 801 aaPredicted RBP20.26■□□□□ 0.83
XRCC3-215ENST00000555964 SNRNP48Q6IEG0 339 aaKnown RBP20.26■□□□□ 0.83
XRCC3-215ENST00000555964 KBTBD3Q8NAB2 608 aa20.26■□□□□ 0.83
XRCC3-215ENST00000555964 PRPF38AQ8NAV1 312 aaKnown RBP20.26■□□□□ 0.83
XRCC3-215ENST00000555964 NUP133Q8WUM0 1156 aa20.26■□□□□ 0.83
XRCC3-215ENST00000555964 APPBP2Q92624 585 aa20.26■□□□□ 0.83
XRCC3-215ENST00000555964 DDX11Q96FC9 970 aa20.26■□□□□ 0.83
XRCC3-215ENST00000555964 FAM161BQ96MY7 647 aa20.26■□□□□ 0.83
XRCC3-215ENST00000555964 SYNPO2Q9UMS6 1093 aa20.26■□□□□ 0.83
XRCC3-215ENST00000555964 MCM3APO60318 1980 aa20.25■□□□□ 0.83
XRCC3-215ENST00000555964 A0A1W2PQ45 241 aaPredicted RBP20.25■□□□□ 0.83
XRCC3-215ENST00000555964 A0A1W2PQY0 241 aa20.25■□□□□ 0.83
XRCC3-215ENST00000555964 MOXD2PA6NHM9 499 aa20.25■□□□□ 0.83
XRCC3-215ENST00000555964 MINDY4BA8MYZ0 360 aa20.25■□□□□ 0.83
XRCC3-215ENST00000555964 SMIM22K7EJ46 135 aa20.25■□□□□ 0.83
XRCC3-215ENST00000555964 ATP2A1O14983 1001 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms