RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 PDHXO00330 501 aa14.84□□□□□ -0.03
SYNE2-219ENST00000555323 BMP3P12645 472 aa14.84□□□□□ -0.03
SYNE2-219ENST00000555323 SLC1A4P43007 532 aa14.84□□□□□ -0.03
SYNE2-219ENST00000555323 NEK4P51957 841 aa14.84□□□□□ -0.03
SYNE2-219ENST00000555323 RCAN1P53805 252 aa14.84□□□□□ -0.03
SYNE2-219ENST00000555323 MAP2K1Q02750 393 aaPredicted RBP14.84□□□□□ -0.03
SYNE2-219ENST00000555323 RABEP1Q15276 862 aa14.84□□□□□ -0.03
SYNE2-219ENST00000555323 CATIPQ7Z7H3 387 aa14.84□□□□□ -0.03
SYNE2-219ENST00000555323 JMYQ8N9B5 988 aa14.84□□□□□ -0.03
SYNE2-219ENST00000555323 RPAP3Q9H6T3 665 aaPredicted RBP14.84□□□□□ -0.03
SYNE2-219ENST00000555323 BRPF3Q9ULD4 1205 aa14.84□□□□□ -0.03
SYNE2-219ENST00000555323 PALM3A6NDB9 673 aaPredicted RBP14.83□□□□□ -0.04
SYNE2-219ENST00000555323 DDAH1O94760 285 aa14.83□□□□□ -0.04
SYNE2-219ENST00000555323 CALM1P0DP23 149 aa14.83□□□□□ -0.04
SYNE2-219ENST00000555323 CALM2P0DP24 149 aa14.83□□□□□ -0.04
SYNE2-219ENST00000555323 CALM3P0DP25 149 aa14.83□□□□□ -0.04
SYNE2-219ENST00000555323 OSBPP22059 807 aa14.83□□□□□ -0.04
SYNE2-219ENST00000555323 ZNF543Q08ER8 600 aa14.83□□□□□ -0.04
SYNE2-219ENST00000555323 COG2Q14746 738 aa14.83□□□□□ -0.04
SYNE2-219ENST00000555323 FAM83BQ5T0W9 1011 aa14.83□□□□□ -0.04
SYNE2-219ENST00000555323 GPATCH4Q5T3I0 446 aaKnown RBP14.83□□□□□ -0.04
SYNE2-219ENST00000555323 BTNL9Q6UXG8 535 aa14.83□□□□□ -0.04
SYNE2-219ENST00000555323 LBX2Q6XYB7 198 aa14.83□□□□□ -0.04
SYNE2-219ENST00000555323 ZNF654Q8IZM8 581 aa14.83□□□□□ -0.04
SYNE2-219ENST00000555323 BRF1Q92994 677 aa14.83□□□□□ -0.04
SYNE2-219ENST00000555323 HOXC10Q9NYD6 342 aa14.83□□□□□ -0.04
SYNE2-219ENST00000555323 PNMA3Q9UL41 463 aa14.83□□□□□ -0.04
SYNE2-219ENST00000555323 ADAMTS5Q9UNA0 930 aa14.83□□□□□ -0.04
SYNE2-219ENST00000555323 SLC12A7Q9Y666 1083 aa14.83□□□□□ -0.04
SYNE2-219ENST00000555323 THSD7BQ9C0I4 1608 aa14.82□□□□□ -0.04
SYNE2-219ENST00000555323 CA12O43570 354 aa14.82□□□□□ -0.04
SYNE2-219ENST00000555323 DSG3P32926 999 aa14.82□□□□□ -0.04
SYNE2-219ENST00000555323 FGD1P98174 961 aa14.82□□□□□ -0.04
SYNE2-219ENST00000555323 GRM4Q14833 912 aa14.82□□□□□ -0.04
SYNE2-219ENST00000555323 PPP2R5BQ15173 497 aa14.82□□□□□ -0.04
SYNE2-219ENST00000555323 ANKRD1Q15327 319 aa14.82□□□□□ -0.04
SYNE2-219ENST00000555323 ASPRV1Q53RT3 343 aa14.82□□□□□ -0.04
SYNE2-219ENST00000555323 APOA5Q6Q788 366 aa14.82□□□□□ -0.04
SYNE2-219ENST00000555323 NFXL1Q6ZNB6 911 aa14.82□□□□□ -0.04
SYNE2-219ENST00000555323 ZNF274Q96GC6 653 aaPredicted RBP14.82□□□□□ -0.04
SYNE2-219ENST00000555323 NUP88Q99567 741 aaPredicted RBP14.82□□□□□ -0.04
SYNE2-219ENST00000555323 P2RX7Q99572 595 aaKnown RBP14.82□□□□□ -0.04
SYNE2-219ENST00000555323 ASCC2Q9H1I8 757 aaPredicted RBP14.82□□□□□ -0.04
SYNE2-219ENST00000555323 FEM1BQ9UK73 627 aa14.82□□□□□ -0.04
SYNE2-219ENST00000555323 MYPNQ86TC9 1320 aa14.82□□□□□ -0.04
SYNE2-219ENST00000555323 LOC285556D6RIA3 1793 aa14.82□□□□□ -0.04
SYNE2-219ENST00000555323 MYH4Q9Y623 1939 aa14.82□□□□□ -0.04
SYNE2-219ENST00000555323 RAD21O60216 631 aa14.81□□□□□ -0.04
SYNE2-219ENST00000555323 PARP1P09874 1014 aaKnown RBP14.81□□□□□ -0.04
SYNE2-219ENST00000555323 SMARCA1P28370 1054 aa14.81□□□□□ -0.04
SYNE2-219ENST00000555323 AK2P54819 239 aa14.81□□□□□ -0.04
SYNE2-219ENST00000555323 SYNE3Q6ZMZ3 975 aa14.81□□□□□ -0.04
SYNE2-219ENST00000555323 KCTD1Q719H9 257 aa14.81□□□□□ -0.04
SYNE2-219ENST00000555323 FAM160B2Q86V87 743 aa14.81□□□□□ -0.04
SYNE2-219ENST00000555323 PRPF38AQ8NAV1 312 aaKnown RBP14.81□□□□□ -0.04
SYNE2-219ENST00000555323 FANCBQ8NB91 859 aa14.81□□□□□ -0.04
SYNE2-219ENST00000555323 CHURC1Q8WUH1 139 aa14.81□□□□□ -0.04
SYNE2-219ENST00000555323 PARK7Q99497 189 aaKnown RBP14.81□□□□□ -0.04
SYNE2-219ENST00000555323 WBP1LQ9NX94 342 aa14.81□□□□□ -0.04
SYNE2-219ENST00000555323 RNF186Q9NXI6 227 aa14.81□□□□□ -0.04
SYNE2-219ENST00000555323 SAGE1Q9NXZ1 904 aa14.81□□□□□ -0.04
SYNE2-219ENST00000555323 MAD2L2Q9UI95 211 aa14.81□□□□□ -0.04
SYNE2-219ENST00000555323 KLF18A0A0U1RQI7 1052 aa14.8□□□□□ -0.04
SYNE2-219ENST00000555323 TMEM232C9JQI7 657 aa14.8□□□□□ -0.04
SYNE2-219ENST00000555323 TLR2O60603 784 aa14.8□□□□□ -0.04
SYNE2-219ENST00000555323 FDX1P10109 184 aa14.8□□□□□ -0.04
SYNE2-219ENST00000555323 PDIA3P30101 505 aaKnown RBP14.8□□□□□ -0.04
SYNE2-219ENST00000555323 STAT2P52630 851 aa14.8□□□□□ -0.04
SYNE2-219ENST00000555323 IRX3P78415 501 aaPredicted RBP14.8□□□□□ -0.04
SYNE2-219ENST00000555323 APOBRQ0VD83 1088 aa14.8□□□□□ -0.04
SYNE2-219ENST00000555323 TTBK2Q6IQ55 1244 aa14.8□□□□□ -0.04
SYNE2-219ENST00000555323 POTEEQ6S8J3 1075 aa14.8□□□□□ -0.04
SYNE2-219ENST00000555323 RASGRP2Q7LDG7 609 aa14.8□□□□□ -0.04
SYNE2-219ENST00000555323 STAG2Q8N3U4 1231 aa14.8□□□□□ -0.04
SYNE2-219ENST00000555323 GTF3C2Q8WUA4 911 aaPredicted RBP14.8□□□□□ -0.04
SYNE2-219ENST00000555323 TANGO6Q9C0B7 1094 aa14.8□□□□□ -0.04
SYNE2-219ENST00000555323 ZFYVE28Q9HCC9 887 aa14.8□□□□□ -0.04
SYNE2-219ENST00000555323 PPP1R9AQ9ULJ8 1098 aa14.8□□□□□ -0.04
SYNE2-219ENST00000555323 HPS5Q9UPZ3 1129 aa14.8□□□□□ -0.04
SYNE2-219ENST00000555323 SPDYE16A6NNV3 312 aaPredicted RBP14.79□□□□□ -0.04
SYNE2-219ENST00000555323 ZBTB43O43298 467 aa14.79□□□□□ -0.04
SYNE2-219ENST00000555323 FLOT1O75955 427 aa14.79□□□□□ -0.04
SYNE2-219ENST00000555323 CYP2C8P10632 490 aa14.79□□□□□ -0.04
SYNE2-219ENST00000555323 KIF5BP33176 963 aa14.79□□□□□ -0.04
SYNE2-219ENST00000555323 GCLCP48506 637 aaPredicted RBP14.79□□□□□ -0.04
SYNE2-219ENST00000555323 GNAQP50148 359 aa14.79□□□□□ -0.04
SYNE2-219ENST00000555323 HERVK_113P62684 666 aa14.79□□□□□ -0.04
SYNE2-219ENST00000555323 NID2Q14112 1375 aa14.79□□□□□ -0.04
SYNE2-219ENST00000555323 TAF1CQ15572 869 aaPredicted RBP14.79□□□□□ -0.04
SYNE2-219ENST00000555323 C17orf99Q6UX52 265 aa14.79□□□□□ -0.04
SYNE2-219ENST00000555323 CTCFLQ8NI51 663 aaPredicted RBP14.79□□□□□ -0.04
SYNE2-219ENST00000555323 NUP133Q8WUM0 1156 aa14.79□□□□□ -0.04
SYNE2-219ENST00000555323 ADGRA2Q96PE1 1338 aa14.79□□□□□ -0.04
SYNE2-219ENST00000555323 SLF1Q9BQI6 1058 aa14.79□□□□□ -0.04
SYNE2-219ENST00000555323 LZTS2Q9BRK4 669 aa14.79□□□□□ -0.04
SYNE2-219ENST00000555323 FAM217BQ9NTX9 383 aaPredicted RBP14.79□□□□□ -0.04
SYNE2-219ENST00000555323 FBXO28Q9NVF7 368 aa14.79□□□□□ -0.04
SYNE2-219ENST00000555323 MTMR7Q9Y216 660 aa14.79□□□□□ -0.04
SYNE2-219ENST00000555323 FRMPD2Q68DX3 1309 aaPredicted RBP14.78□□□□□ -0.04
SYNE2-219ENST00000555323 KLRF2D3W0D1 207 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms