RNA–Protein interactions for RNA: ENST00000554986.2

SIX1-203, Transcript of SIX homeobox 1, humanhuman

TSL 3 BASIC

Gene SIX1, Length 1,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-203ENST00000554986 TCEANC2Q96MN5 208 aa15.18■□□□□ 0.02
SIX1-203ENST00000554986 PUS7LQ9H0K6 701 aaKnown RBP15.18■□□□□ 0.02
SIX1-203ENST00000554986 LCMT1Q9UIC8 334 aa15.18■□□□□ 0.02
SIX1-203ENST00000554986 CLRN2A0PK11 232 aa15.17■□□□□ 0.02
SIX1-203ENST00000554986 ZFYP08048 801 aaPredicted RBP15.17■□□□□ 0.02
SIX1-203ENST00000554986 CHRM1P11229 460 aaPredicted RBP15.17■□□□□ 0.02
SIX1-203ENST00000554986 MAGEA9P43362 315 aa15.17■□□□□ 0.02
SIX1-203ENST00000554986 FANCCQ00597 558 aa15.17■□□□□ 0.02
SIX1-203ENST00000554986 DPCR1Q3MIW9 517 aa15.17■□□□□ 0.02
SIX1-203ENST00000554986 CDC42EP5Q6NZY7 148 aa15.17■□□□□ 0.02
SIX1-203ENST00000554986 DDX11Q96FC9 970 aa15.17■□□□□ 0.02
SIX1-203ENST00000554986 SDF4Q9BRK5 362 aa15.17■□□□□ 0.02
SIX1-203ENST00000554986 RIOK1Q9BRS2 568 aaKnown RBP15.17■□□□□ 0.02
SIX1-203ENST00000554986 ZCCHC17Q9NP64 241 aaKnown RBP15.17■□□□□ 0.02
SIX1-203ENST00000554986 SCAF8Q9UPN6 1271 aaKnown RBP15.17■□□□□ 0.02
SIX1-203ENST00000554986 TAF6LQ9Y6J9 622 aa15.17■□□□□ 0.02
SIX1-203ENST00000554986 U3KPZ7 1027 aaPredicted RBP15.17■□□□□ 0.02
SIX1-203ENST00000554986 VWA3AA6NCI4 1184 aa15.16■□□□□ 0.02
SIX1-203ENST00000554986 POTEB2H3BUK9 544 aa15.16■□□□□ 0.02
SIX1-203ENST00000554986 M0R2C6 588 aa15.16■□□□□ 0.02
SIX1-203ENST00000554986 KIF3CO14782 793 aa15.16■□□□□ 0.02
SIX1-203ENST00000554986 TRIM66O15016 1216 aa15.16■□□□□ 0.02
SIX1-203ENST00000554986 HMGB1P09429 215 aaKnown RBP15.16■□□□□ 0.02
SIX1-203ENST00000554986 ME1P48163 572 aa15.16■□□□□ 0.02
SIX1-203ENST00000554986 CACNB3P54284 484 aa15.16■□□□□ 0.02
SIX1-203ENST00000554986 RHBDL3P58872 404 aa15.16■□□□□ 0.02
SIX1-203ENST00000554986 PPP2R3AQ06190 1150 aa15.16■□□□□ 0.02
SIX1-203ENST00000554986 SCRN1Q12765 414 aa15.16■□□□□ 0.02
SIX1-203ENST00000554986 ZMYM1Q5SVZ6 1142 aa15.16■□□□□ 0.02
SIX1-203ENST00000554986 LEKR1Q6ZMV7 388 aa15.16■□□□□ 0.02
SIX1-203ENST00000554986 APPBP2Q92624 585 aa15.16■□□□□ 0.02
SIX1-203ENST00000554986 GOLGA1Q92805 767 aa15.16■□□□□ 0.02
SIX1-203ENST00000554986 PARD6BQ9BYG5 372 aa15.16■□□□□ 0.02
SIX1-203ENST00000554986 TXLNAP40222 546 aa15.16■□□□□ 0.02
SIX1-203ENST00000554986 USP5P45974 858 aa15.16■□□□□ 0.02
SIX1-203ENST00000554986 PPP4CP60510 307 aa15.16■□□□□ 0.02
SIX1-203ENST00000554986 MAPK8IP2Q13387 824 aaPredicted RBP15.16■□□□□ 0.02
SIX1-203ENST00000554986 LONRF2Q1L5Z9 754 aa15.16■□□□□ 0.02
SIX1-203ENST00000554986 SPDYE2Q495Y8 402 aa15.16■□□□□ 0.02
SIX1-203ENST00000554986 TMED8Q6PL24 325 aaPredicted RBP15.16■□□□□ 0.02
SIX1-203ENST00000554986 Q6ZUG5 572 aa15.16■□□□□ 0.02
SIX1-203ENST00000554986 PNMA8AQ86V59 439 aaPredicted RBP15.16■□□□□ 0.02
SIX1-203ENST00000554986 SH3RF3Q8TEJ3 882 aaPredicted RBP15.16■□□□□ 0.02
SIX1-203ENST00000554986 AGXT2Q9BYV1 514 aa15.16■□□□□ 0.02
SIX1-203ENST00000554986 USP40Q9NVE5 1235 aa15.16■□□□□ 0.02
SIX1-203ENST00000554986 ZNF70Q9UC06 446 aaPredicted RBP15.16■□□□□ 0.02
SIX1-203ENST00000554986 MKRN1Q9UHC7 482 aaKnown RBP15.16■□□□□ 0.02
SIX1-203ENST00000554986 PCDHA7Q9UN72 937 aa15.16■□□□□ 0.02
SIX1-203ENST00000554986 MAGEB6P1A0A0J9YX57 407 aa15.15■□□□□ 0.02
SIX1-203ENST00000554986 YEATS4O95619 227 aa15.15■□□□□ 0.02
SIX1-203ENST00000554986 ANGEL2Q5VTE6 544 aaKnown RBP15.15■□□□□ 0.02
SIX1-203ENST00000554986 TEX2Q8IWB9 1127 aa15.15■□□□□ 0.02
SIX1-203ENST00000554986 LCORLQ8N3X6 602 aa15.15■□□□□ 0.02
SIX1-203ENST00000554986 KCNG4Q8TDN1 519 aa15.15■□□□□ 0.02
SIX1-203ENST00000554986 ARMT1Q9H993 441 aa15.15■□□□□ 0.02
SIX1-203ENST00000554986 GGA3Q9NZ52 723 aa15.15■□□□□ 0.02
SIX1-203ENST00000554986 MBD4O95243 580 aa15.15■□□□□ 0.02
SIX1-203ENST00000554986 GUCY2CP25092 1073 aa15.15■□□□□ 0.02
SIX1-203ENST00000554986 LMAN1P49257 510 aa15.15■□□□□ 0.02
SIX1-203ENST00000554986 GTF2A1P52655 376 aaPredicted RBP15.15■□□□□ 0.02
SIX1-203ENST00000554986 CEBPZQ03701 1054 aaKnown RBP15.15■□□□□ 0.02
SIX1-203ENST00000554986 FOCADQ5VW36 1801 aa15.15■□□□□ 0.02
SIX1-203ENST00000554986 CCDC129Q6ZRS4 1044 aa15.15■□□□□ 0.02
SIX1-203ENST00000554986 TMEM139Q8IV31 216 aa15.15■□□□□ 0.02
SIX1-203ENST00000554986 VSTM4Q8IW00 320 aa15.15■□□□□ 0.02
SIX1-203ENST00000554986 PPP2R2CQ9Y2T4 447 aa15.15■□□□□ 0.02
SIX1-203ENST00000554986 A0A087WWV3 80 aa15.14■□□□□ 0.01
SIX1-203ENST00000554986 H3BQF6 201 aa15.14■□□□□ 0.01
SIX1-203ENST00000554986 BAG3O95817 575 aa15.14■□□□□ 0.01
SIX1-203ENST00000554986 SLC3A2P08195 630 aaKnown RBP15.14■□□□□ 0.01
SIX1-203ENST00000554986 NFIAQ12857 509 aa15.14■□□□□ 0.01
SIX1-203ENST00000554986 TUBB2AQ13885 445 aa15.14■□□□□ 0.01
SIX1-203ENST00000554986 ZNF589Q86UQ0 364 aaPredicted RBP15.14■□□□□ 0.01
SIX1-203ENST00000554986 TICAM2Q86XR7 235 aa15.14■□□□□ 0.01
SIX1-203ENST00000554986 TUBB2BQ9BVA1 445 aa15.14■□□□□ 0.01
SIX1-203ENST00000554986 FTOQ9C0B1 505 aaKnown RBP eCLIP15.14■□□□□ 0.01
SIX1-203ENST00000554986 HSD3B7Q9H2F3 369 aa15.14■□□□□ 0.01
SIX1-203ENST00000554986 VEZTQ9HBM0 779 aa15.14■□□□□ 0.01
SIX1-203ENST00000554986 PGAP2Q9UHJ9 254 aa15.14■□□□□ 0.01
SIX1-203ENST00000554986 RAB21Q9UL25 225 aa15.14■□□□□ 0.01
SIX1-203ENST00000554986 PTPDC1A2A3K4 754 aa15.13■□□□□ 0.01
SIX1-203ENST00000554986 WDHD1O75717 1129 aaPredicted RBP15.13■□□□□ 0.01
SIX1-203ENST00000554986 CTDNEP1O95476 244 aa15.13■□□□□ 0.01
SIX1-203ENST00000554986 APOBRQ0VD83 1088 aa15.13■□□□□ 0.01
SIX1-203ENST00000554986 LINC00301Q8NCQ3 95 aa15.13■□□□□ 0.01
SIX1-203ENST00000554986 KIFC2Q96AC6 838 aa15.13■□□□□ 0.01
SIX1-203ENST00000554986 DDX4Q9NQI0 724 aaKnown RBP15.13■□□□□ 0.01
SIX1-203ENST00000554986 CLEC11AQ9Y240 323 aa15.13■□□□□ 0.01
SIX1-203ENST00000554986 TCP10L2B9ZVM9 353 aa15.13■□□□□ 0.01
SIX1-203ENST00000554986 GPAA1O43292 621 aa15.13■□□□□ 0.01
SIX1-203ENST00000554986 STX10O60499 249 aa15.13■□□□□ 0.01
SIX1-203ENST00000554986 EIF3JO75822 258 aaKnown RBP15.13■□□□□ 0.01
SIX1-203ENST00000554986 NDUFA8P51970 172 aa15.13■□□□□ 0.01
SIX1-203ENST00000554986 DLK2Q6UY11 383 aa15.13■□□□□ 0.01
SIX1-203ENST00000554986 TEX11Q8IYF3 940 aa15.13■□□□□ 0.01
SIX1-203ENST00000554986 AIDAQ96BJ3 306 aa15.13■□□□□ 0.01
SIX1-203ENST00000554986 CCDC34Q96HJ3 373 aa15.13■□□□□ 0.01
SIX1-203ENST00000554986 POLR3EQ9NVU0 708 aa15.13■□□□□ 0.01
SIX1-203ENST00000554986 TUBE1Q9UJT0 475 aa15.13■□□□□ 0.01
SIX1-203ENST00000554986 LAMA4Q16363 1823 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms