RNA–Protein interactions for RNA: ENST00000554822.5

LINC01550-204, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 3

Gene LINC01550, Length 852 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-204ENST00000554822 FERD3LQ96RJ6 166 aa7.61□□□□□ -1.19
LINC01550-204ENST00000554822 ZNRF3Q9ULT6 936 aa7.61□□□□□ -1.19
LINC01550-204ENST00000554822 MEIS3P2A8K0S8 358 aa7.6□□□□□ -1.19
LINC01550-204ENST00000554822 ASPNQ9BXN1 380 aa7.6□□□□□ -1.19
LINC01550-204ENST00000554822 RC3H2Q9HBD1 1191 aaKnown RBP7.6□□□□□ -1.19
LINC01550-204ENST00000554822 GINM1Q9NU53 330 aa7.6□□□□□ -1.19
LINC01550-204ENST00000554822 IFT140Q96RY7 1462 aa7.6□□□□□ -1.19
LINC01550-204ENST00000554822 MAP3K1Q13233 1512 aa7.59□□□□□ -1.19
LINC01550-204ENST00000554822 FAM86C2PA6NEL3 165 aa7.59□□□□□ -1.19
LINC01550-204ENST00000554822 SRFP11831 508 aa7.59□□□□□ -1.19
LINC01550-204ENST00000554822 TPP2P29144 1249 aaPredicted RBP7.59□□□□□ -1.19
LINC01550-204ENST00000554822 RAD51AP2Q09MP3 1159 aa7.59□□□□□ -1.19
LINC01550-204ENST00000554822 CCDC81Q6ZN84 652 aa7.59□□□□□ -1.19
LINC01550-204ENST00000554822 LRRN4CLQ8ND94 238 aa7.59□□□□□ -1.19
LINC01550-204ENST00000554822 GPRASP2Q96D09 838 aa7.59□□□□□ -1.19
LINC01550-204ENST00000554822 ZNF512BQ96KM6 892 aaPredicted RBP7.59□□□□□ -1.19
LINC01550-204ENST00000554822 SLC9A7Q96T83 725 aa7.59□□□□□ -1.19
LINC01550-204ENST00000554822 GPR62Q9BZJ7 368 aa7.59□□□□□ -1.19
LINC01550-204ENST00000554822 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.59□□□□□ -1.19
LINC01550-204ENST00000554822 ACBD3Q9H3P7 528 aa7.59□□□□□ -1.19
LINC01550-204ENST00000554822 LMCD1Q9NZU5 365 aa7.59□□□□□ -1.19
LINC01550-204ENST00000554822 EFR3BQ9Y2G0 817 aa7.59□□□□□ -1.19
LINC01550-204ENST00000554822 TDRD9Q8NDG6 1382 aaKnown RBP7.59□□□□□ -1.2
LINC01550-204ENST00000554822 ESR1P03372 595 aa7.58□□□□□ -1.2
LINC01550-204ENST00000554822 ZEB1P37275 1124 aaPredicted RBP7.58□□□□□ -1.2
LINC01550-204ENST00000554822 CREG2Q8IUH2 290 aa7.58□□□□□ -1.2
LINC01550-204ENST00000554822 TMEM192Q8IY95 271 aa7.58□□□□□ -1.2
LINC01550-204ENST00000554822 TGIF2Q9GZN2 237 aa7.58□□□□□ -1.2
LINC01550-204ENST00000554822 TRIT1Q9H3H1 467 aaKnown RBP7.58□□□□□ -1.2
LINC01550-204ENST00000554822 GPATCH2Q9NW75 528 aa7.58□□□□□ -1.2
LINC01550-204ENST00000554822 SRCAPQ6ZRS2 3230 aa7.57□□□□□ -1.2
LINC01550-204ENST00000554822 SHISA3A0PJX4 238 aa7.57□□□□□ -1.2
LINC01550-204ENST00000554822 TNFRSF10CO14798 259 aa7.57□□□□□ -1.2
LINC01550-204ENST00000554822 ACRP10323 421 aa7.57□□□□□ -1.2
LINC01550-204ENST00000554822 IMPDH2P12268 514 aa7.57□□□□□ -1.2
LINC01550-204ENST00000554822 NBPF12Q5TAG4 269 aaPredicted RBP7.57□□□□□ -1.2
LINC01550-204ENST00000554822 RUFY4Q6ZNE9 571 aa7.57□□□□□ -1.2
LINC01550-204ENST00000554822 TMPRSS7Q7RTY8 843 aa7.57□□□□□ -1.2
LINC01550-204ENST00000554822 ADAMTS12P58397 1594 aa7.57□□□□□ -1.2
LINC01550-204ENST00000554822 GRIN2BQ13224 1484 aa7.56□□□□□ -1.2
LINC01550-204ENST00000554822 SAMD9Q5K651 1589 aa7.56□□□□□ -1.2
LINC01550-204ENST00000554822 FHAD1B1AJZ9 1412 aa7.56□□□□□ -1.2
LINC01550-204ENST00000554822 CLEC3AO75596 197 aa7.56□□□□□ -1.2
LINC01550-204ENST00000554822 CCNFP41002 786 aa7.56□□□□□ -1.2
LINC01550-204ENST00000554822 RNF4P78317 190 aa7.56□□□□□ -1.2
LINC01550-204ENST00000554822 TSPYL5Q86VY4 417 aaPredicted RBP7.56□□□□□ -1.2
LINC01550-204ENST00000554822 RASGRP4Q8TDF6 673 aa7.56□□□□□ -1.2
LINC01550-204ENST00000554822 CCSER2Q9H7U1 834 aa7.56□□□□□ -1.2
LINC01550-204ENST00000554822 CFAP43Q8NDM7 1665 aa7.56□□□□□ -1.2
LINC01550-204ENST00000554822 AQRO60306 1485 aaKnown RBP eCLIP7.55□□□□□ -1.2
LINC01550-204ENST00000554822 TIAM1Q13009 1591 aa7.55□□□□□ -1.2
LINC01550-204ENST00000554822 TCF3P15923 654 aa7.55□□□□□ -1.2
LINC01550-204ENST00000554822 ITGB5P18084 799 aa7.55□□□□□ -1.2
LINC01550-204ENST00000554822 GJA8P48165 433 aa7.55□□□□□ -1.2
LINC01550-204ENST00000554822 SOX9P48436 509 aa7.55□□□□□ -1.2
LINC01550-204ENST00000554822 COL9A2Q14055 689 aaPredicted RBP7.55□□□□□ -1.2
LINC01550-204ENST00000554822 GAB4Q2WGN9 574 aa7.55□□□□□ -1.2
LINC01550-204ENST00000554822 RBBP8NLQ8NC74 664 aaPredicted RBP7.55□□□□□ -1.2
LINC01550-204ENST00000554822 SPATA32Q96LK8 384 aa7.55□□□□□ -1.2
LINC01550-204ENST00000554822 SLC6A18Q96N87 628 aa7.55□□□□□ -1.2
LINC01550-204ENST00000554822 KRTAP4-12Q9BQ66 201 aa7.55□□□□□ -1.2
LINC01550-204ENST00000554822 SLAMF8Q9P0V8 285 aa7.55□□□□□ -1.2
LINC01550-204ENST00000554822 DUSP13Q9UII6 198 aa7.55□□□□□ -1.2
LINC01550-204ENST00000554822 INPP5FQ9Y2H2 1132 aa7.55□□□□□ -1.2
LINC01550-204ENST00000554822 ERCC5P28715 1186 aaPredicted RBP7.54□□□□□ -1.2
LINC01550-204ENST00000554822 SNW1Q13573 536 aaKnown RBP7.54□□□□□ -1.2
LINC01550-204ENST00000554822 CLEC16AQ2KHT3 1053 aa7.54□□□□□ -1.2
LINC01550-204ENST00000554822 NBPF9Q3BBW0 867 aa7.54□□□□□ -1.2
LINC01550-204ENST00000554822 INTS3Q68E01 1043 aaKnown RBP7.54□□□□□ -1.2
LINC01550-204ENST00000554822 ATG4DQ86TL0 474 aaPredicted RBP7.54□□□□□ -1.2
LINC01550-204ENST00000554822 LSRQ86X29 649 aaPredicted RBP7.54□□□□□ -1.2
LINC01550-204ENST00000554822 EIF4G3O43432 1585 aaKnown RBP7.54□□□□□ -1.2
LINC01550-204ENST00000554822 DNAJC25-GNG10A0A024R161 153 aa7.53□□□□□ -1.2
LINC01550-204ENST00000554822 PAPLNO95428 1278 aa7.53□□□□□ -1.2
LINC01550-204ENST00000554822 NASPP49321 788 aaPredicted RBP7.53□□□□□ -1.2
LINC01550-204ENST00000554822 EGR3Q06889 387 aa7.53□□□□□ -1.2
LINC01550-204ENST00000554822 NMIQ13287 307 aaPredicted RBP7.53□□□□□ -1.2
LINC01550-204ENST00000554822 ZYXQ15942 572 aaKnown RBP7.53□□□□□ -1.2
LINC01550-204ENST00000554822 RALGPS1Q5JS13 557 aa7.53□□□□□ -1.2
LINC01550-204ENST00000554822 TMC3Q7Z5M5 1100 aa7.53□□□□□ -1.2
LINC01550-204ENST00000554822 KRTAP1-3Q8IUG1 177 aa7.53□□□□□ -1.2
LINC01550-204ENST00000554822 CRBNQ96SW2 442 aa7.53□□□□□ -1.2
LINC01550-204ENST00000554822 TM9SF2Q99805 663 aa7.53□□□□□ -1.2
LINC01550-204ENST00000554822 MKRN2Q9H000 416 aaKnown RBP7.53□□□□□ -1.2
LINC01550-204ENST00000554822 ASCC2Q9H1I8 757 aaPredicted RBP7.53□□□□□ -1.2
LINC01550-204ENST00000554822 CTNND2Q9UQB3 1225 aa7.53□□□□□ -1.2
LINC01550-204ENST00000554822 PCDHA11Q9Y5I1 949 aa7.53□□□□□ -1.2
LINC01550-204ENST00000554822 FYCO1Q9BQS8 1478 aa7.53□□□□□ -1.2
LINC01550-204ENST00000554822 PCF11O94913 1555 aaKnown RBP7.52□□□□□ -1.21
LINC01550-204ENST00000554822 IQGAP2Q13576 1575 aa7.52□□□□□ -1.21
LINC01550-204ENST00000554822 BIN1O00499 593 aa7.52□□□□□ -1.21
LINC01550-204ENST00000554822 JUNBP17275 347 aaPredicted RBP7.52□□□□□ -1.21
LINC01550-204ENST00000554822 LTKP29376 864 aa7.52□□□□□ -1.21
LINC01550-204ENST00000554822 EIF6P56537 245 aaKnown RBP7.52□□□□□ -1.21
LINC01550-204ENST00000554822 ALPK1Q96QP1 1244 aa7.52□□□□□ -1.21
LINC01550-204ENST00000554822 PRDM14Q9GZV8 571 aa7.52□□□□□ -1.21
LINC01550-204ENST00000554822 ADAMTS10Q9H324 1103 aa7.52□□□□□ -1.21
LINC01550-204ENST00000554822 C19orf73Q9NVV2 129 aa7.52□□□□□ -1.21
LINC01550-204ENST00000554822 SUCOQ9UBS9 1254 aaKnown RBP7.52□□□□□ -1.21
LINC01550-204ENST00000554822 FMN1Q68DA7 1419 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms