RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 RPS6KA4O75676 772 aa6.72□□□□□ -1.33
ATXN3-228ENST00000554592 DLGAP3O95886 979 aa6.72□□□□□ -1.33
ATXN3-228ENST00000554592 NLRP12P59046 1061 aa6.72□□□□□ -1.33
ATXN3-228ENST00000554592 ENOX2Q16206 610 aaKnown RBP6.72□□□□□ -1.33
ATXN3-228ENST00000554592 ZNF423Q2M1K9 1284 aa6.72□□□□□ -1.33
ATXN3-228ENST00000554592 IFNL2Q8IZJ0 200 aa6.72□□□□□ -1.33
ATXN3-228ENST00000554592 GLIS3Q8NEA6 775 aa6.72□□□□□ -1.33
ATXN3-228ENST00000554592 MRRFQ96E11 262 aaKnown RBP6.72□□□□□ -1.33
ATXN3-228ENST00000554592 FAM46AQ96IP4 442 aaKnown RBP6.72□□□□□ -1.33
ATXN3-228ENST00000554592 KRTAP4-8Q9BYQ9 185 aa6.72□□□□□ -1.33
ATXN3-228ENST00000554592 KIF24Q5T7B8 1368 aa6.71□□□□□ -1.33
ATXN3-228ENST00000554592 C10orf71Q711Q0 1435 aa6.71□□□□□ -1.34
ATXN3-228ENST00000554592 PNMA6FA0A0J9YX94 578 aa6.71□□□□□ -1.34
ATXN3-228ENST00000554592 MEGF11A6BM72 1044 aa6.71□□□□□ -1.34
ATXN3-228ENST00000554592 GLTPD2A6NH11 291 aa6.71□□□□□ -1.34
ATXN3-228ENST00000554592 LDHBP07195 334 aaKnown RBP6.71□□□□□ -1.34
ATXN3-228ENST00000554592 ITPKAP23677 461 aa6.71□□□□□ -1.34
ATXN3-228ENST00000554592 ABCB6Q9NP58 842 aa6.71□□□□□ -1.34
ATXN3-228ENST00000554592 RNF19AQ9NV58 838 aa6.71□□□□□ -1.34
ATXN3-228ENST00000554592 CICQ96RK0 1608 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-228ENST00000554592 LOC100289279A0A1B0GTE1 492 aa6.7□□□□□ -1.34
ATXN3-228ENST00000554592 ERVV-2B6SEH9 535 aa6.7□□□□□ -1.34
ATXN3-228ENST00000554592 PHKG2P15735 406 aa6.7□□□□□ -1.34
ATXN3-228ENST00000554592 GLB1P16278 677 aa6.7□□□□□ -1.34
ATXN3-228ENST00000554592 LMNB1P20700 586 aa6.7□□□□□ -1.34
ATXN3-228ENST00000554592 ARL4DP49703 201 aa6.7□□□□□ -1.34
ATXN3-228ENST00000554592 PRPF40BQ6NWY9 871 aaKnown RBP6.7□□□□□ -1.34
ATXN3-228ENST00000554592 EPS8L3Q8TE67 593 aaKnown RBP6.7□□□□□ -1.34
ATXN3-228ENST00000554592 TESK2Q96S53 571 aa6.7□□□□□ -1.34
ATXN3-228ENST00000554592 TMPRSS13Q9BYE2 586 aa6.7□□□□□ -1.34
ATXN3-228ENST00000554592 CLEC4MQ9H2X3 399 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-228ENST00000554592 ZNF576Q9H609 170 aa6.7□□□□□ -1.34
ATXN3-228ENST00000554592 FLT4P35916 1363 aa6.69□□□□□ -1.34
ATXN3-228ENST00000554592 ST20-MTHFSA0A0A6YYL1 179 aa6.69□□□□□ -1.34
ATXN3-228ENST00000554592 PRPF40AO75400 957 aaKnown RBP6.69□□□□□ -1.34
ATXN3-228ENST00000554592 HSP90AB1P08238 724 aaKnown RBP6.69□□□□□ -1.34
ATXN3-228ENST00000554592 CHRNA5P30532 468 aa6.69□□□□□ -1.34
ATXN3-228ENST00000554592 PCDH1Q08174 1060 aa6.69□□□□□ -1.34
ATXN3-228ENST00000554592 DUSP9Q99956 384 aaKnown RBP6.69□□□□□ -1.34
ATXN3-228ENST00000554592 CEP41Q9BYV8 373 aa6.69□□□□□ -1.34
ATXN3-228ENST00000554592 RNF208Q9H0X6 261 aa6.69□□□□□ -1.34
ATXN3-228ENST00000554592 EHD4Q9H223 541 aa6.69□□□□□ -1.34
ATXN3-228ENST00000554592 PRDM10Q9NQV6 1147 aa6.69□□□□□ -1.34
ATXN3-228ENST00000554592 KCPQ6ZWJ8 1503 aa6.69□□□□□ -1.34
ATXN3-228ENST00000554592 CNTNAP4Q9C0A0 1308 aa6.69□□□□□ -1.34
ATXN3-228ENST00000554592 TUBGCP6Q96RT7 1819 aa6.69□□□□□ -1.34
ATXN3-228ENST00000554592 TONSLQ96HA7 1378 aa6.69□□□□□ -1.34
ATXN3-228ENST00000554592 USP54Q70EL1 1684 aa6.68□□□□□ -1.34
ATXN3-228ENST00000554592 C4BP0C0L5 1744 aa6.68□□□□□ -1.34
ATXN3-228ENST00000554592 PPM1GO15355 546 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-228ENST00000554592 CTSBP07858 339 aa6.68□□□□□ -1.34
ATXN3-228ENST00000554592 TM4SF1P30408 202 aa6.68□□□□□ -1.34
ATXN3-228ENST00000554592 PTPN12Q05209 780 aaKnown RBP6.68□□□□□ -1.34
ATXN3-228ENST00000554592 DDR1Q08345 913 aa6.68□□□□□ -1.34
ATXN3-228ENST00000554592 GRM2Q14416 872 aa6.68□□□□□ -1.34
ATXN3-228ENST00000554592 UVSSAQ2YD98 709 aa6.68□□□□□ -1.34
ATXN3-228ENST00000554592 PI16Q6UXB8 463 aa6.68□□□□□ -1.34
ATXN3-228ENST00000554592 PSMG3-AS1Q96PY0 264 aa6.68□□□□□ -1.34
ATXN3-228ENST00000554592 PARP2Q9UGN5 583 aa6.68□□□□□ -1.34
ATXN3-228ENST00000554592 WASHC2AQ641Q2 1341 aa6.68□□□□□ -1.34
ATXN3-228ENST00000554592 MON2Q7Z3U7 1717 aa6.67□□□□□ -1.34
ATXN3-228ENST00000554592 DOT1LQ8TEK3 1739 aa6.67□□□□□ -1.34
ATXN3-228ENST00000554592 TMEM238LA0A1B0GVL6 79 aa6.67□□□□□ -1.34
ATXN3-228ENST00000554592 B3GALT4O96024 378 aa6.67□□□□□ -1.34
ATXN3-228ENST00000554592 PREPP48147 710 aa6.67□□□□□ -1.34
ATXN3-228ENST00000554592 CTCFP49711 727 aaPredicted RBP6.67□□□□□ -1.34
ATXN3-228ENST00000554592 ATP2B2Q01814 1243 aa6.67□□□□□ -1.34
ATXN3-228ENST00000554592 GSTM4Q03013 218 aa6.67□□□□□ -1.34
ATXN3-228ENST00000554592 ZMYM1Q5SVZ6 1142 aa6.67□□□□□ -1.34
ATXN3-228ENST00000554592 ANKRD34AQ69YU3 496 aa6.67□□□□□ -1.34
ATXN3-228ENST00000554592 ALG1LQ6GMV1 187 aa6.67□□□□□ -1.34
ATXN3-228ENST00000554592 TTLL6Q8N841 843 aa6.67□□□□□ -1.34
ATXN3-228ENST00000554592 FAM161BQ96MY7 647 aa6.67□□□□□ -1.34
ATXN3-228ENST00000554592 TRIM56Q9BRZ2 755 aaKnown RBP6.67□□□□□ -1.34
ATXN3-228ENST00000554592 RUSC1Q9BVN2 902 aa6.67□□□□□ -1.34
ATXN3-228ENST00000554592 SRP68Q9UHB9 627 aaKnown RBP6.67□□□□□ -1.34
ATXN3-228ENST00000554592 RAXQ9Y2V3 346 aa6.67□□□□□ -1.34
ATXN3-228ENST00000554592 FAM208AQ9UK61 1670 aaKnown RBP6.67□□□□□ -1.34
ATXN3-228ENST00000554592 LTN1O94822 1766 aa6.67□□□□□ -1.34
ATXN3-228ENST00000554592 C5P01031 1676 aa6.66□□□□□ -1.34
ATXN3-228ENST00000554592 POLRMTO00411 1230 aaKnown RBP6.66□□□□□ -1.34
ATXN3-228ENST00000554592 FOXN1O15353 648 aa6.66□□□□□ -1.34
ATXN3-228ENST00000554592 TIAF1O95411 115 aa6.66□□□□□ -1.34
ATXN3-228ENST00000554592 VAMP1P23763 118 aa6.66□□□□□ -1.34
ATXN3-228ENST00000554592 CRKLP46109 303 aaKnown RBP6.66□□□□□ -1.34
ATXN3-228ENST00000554592 FGD1P98174 961 aa6.66□□□□□ -1.34
ATXN3-228ENST00000554592 FAAP100Q0VG06 881 aa6.66□□□□□ -1.34
ATXN3-228ENST00000554592 MRPL58Q14197 206 aaKnown RBP6.66□□□□□ -1.34
ATXN3-228ENST00000554592 PLEKHO1Q53GL0 409 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-228ENST00000554592 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-228ENST00000554592 SMG8Q8ND04 991 aaKnown RBP6.66□□□□□ -1.34
ATXN3-228ENST00000554592 MYRFLQ96LU7 910 aa6.66□□□□□ -1.34
ATXN3-228ENST00000554592 SUGCTQ9HAC7 445 aa6.66□□□□□ -1.34
ATXN3-228ENST00000554592 USP42Q9H9J4 1324 aaKnown RBP6.66□□□□□ -1.34
ATXN3-228ENST00000554592 KDRP35968 1356 aa6.66□□□□□ -1.34
ATXN3-228ENST00000554592 WDR90Q96KV7 1748 aa6.65□□□□□ -1.34
ATXN3-228ENST00000554592 H0YIN7 160 aa6.65□□□□□ -1.34
ATXN3-228ENST00000554592 GADD45BO75293 160 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-228ENST00000554592 ECEL1O95672 775 aa6.65□□□□□ -1.34
ATXN3-228ENST00000554592 FSTP19883 344 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms