RNA–Protein interactions for RNA: ENST00000554533.5

CASC1-207, Transcript of cancer susceptibility 1, humanhuman

TSL 2

Gene CASC1, Length 2,208 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1-207ENST00000554533 ATXN3LQ9H3M9 355 aa6.3□□□□□ -1.4
CASC1-207ENST00000554533 TERTO14746 1132 aaKnown RBP6.3□□□□□ -1.4
CASC1-207ENST00000554533 TBX1O43435 398 aa6.3□□□□□ -1.4
CASC1-207ENST00000554533 CLEC3AO75596 197 aa6.3□□□□□ -1.4
CASC1-207ENST00000554533 ITGAVP06756 1048 aa6.3□□□□□ -1.4
CASC1-207ENST00000554533 GBP1P32455 592 aa6.3□□□□□ -1.4
CASC1-207ENST00000554533 GRIA2P42262 883 aa6.3□□□□□ -1.4
CASC1-207ENST00000554533 PPP2R2AP63151 447 aa6.3□□□□□ -1.4
CASC1-207ENST00000554533 TRAPPC3LQ5T215 181 aa6.3□□□□□ -1.4
CASC1-207ENST00000554533 FMR1NBQ8N0W7 255 aaPredicted RBP6.3□□□□□ -1.4
CASC1-207ENST00000554533 XAGE3Q8WTP9 111 aa6.3□□□□□ -1.4
CASC1-207ENST00000554533 PPP1R13LQ8WUF5 828 aa6.3□□□□□ -1.4
CASC1-207ENST00000554533 DHRS4Q9BTZ2 278 aa6.3□□□□□ -1.4
CASC1-207ENST00000554533 EEA1Q15075 1411 aa6.3□□□□□ -1.4
CASC1-207ENST00000554533 A0A0A0MRY4 1105 aa6.29□□□□□ -1.4
CASC1-207ENST00000554533 MEGF11A6BM72 1044 aa6.29□□□□□ -1.4
CASC1-207ENST00000554533 AGRPO00253 132 aa6.29□□□□□ -1.4
CASC1-207ENST00000554533 KCNQ2O43526 872 aa6.29□□□□□ -1.4
CASC1-207ENST00000554533 CST3P01034 146 aaPredicted RBP6.29□□□□□ -1.4
CASC1-207ENST00000554533 PDGFRBP09619 1106 aa6.29□□□□□ -1.4
CASC1-207ENST00000554533 CAP2P40123 477 aa6.29□□□□□ -1.4
CASC1-207ENST00000554533 STAT3P40763 770 aa6.29□□□□□ -1.4
CASC1-207ENST00000554533 HEATR6Q6AI08 1181 aaKnown RBP6.29□□□□□ -1.4
CASC1-207ENST00000554533 LYPD4Q6UWN0 246 aa6.29□□□□□ -1.4
CASC1-207ENST00000554533 ACAD11Q709F0 780 aa6.29□□□□□ -1.4
CASC1-207ENST00000554533 ZNF227Q86WZ6 799 aa6.29□□□□□ -1.4
CASC1-207ENST00000554533 NGEFQ8N5V2 710 aa6.29□□□□□ -1.4
CASC1-207ENST00000554533 PRPF38AQ8NAV1 312 aaKnown RBP6.29□□□□□ -1.4
CASC1-207ENST00000554533 APBA2Q99767 749 aa6.29□□□□□ -1.4
CASC1-207ENST00000554533 SUGCTQ9HAC7 445 aa6.29□□□□□ -1.4
CASC1-207ENST00000554533 RAPGEF2Q9Y4G8 1499 aa6.29□□□□□ -1.4
CASC1-207ENST00000554533 TRAV20A0A0B4J274 112 aa6.29□□□□□ -1.4
CASC1-207ENST00000554533 RBAK-RBAKDNI3L0D1 243 aa6.29□□□□□ -1.4
CASC1-207ENST00000554533 RFPL3O75679 317 aa6.29□□□□□ -1.4
CASC1-207ENST00000554533 CAPNS1P04632 268 aa6.29□□□□□ -1.4
CASC1-207ENST00000554533 CELA2BP08218 269 aaPredicted RBP6.29□□□□□ -1.4
CASC1-207ENST00000554533 CNGA1P29973 690 aa6.29□□□□□ -1.4
CASC1-207ENST00000554533 NUTM2GQ5VZR2 741 aa6.29□□□□□ -1.4
CASC1-207ENST00000554533 NOL8Q76FK4 1167 aaKnown RBP6.29□□□□□ -1.4
CASC1-207ENST00000554533 CDC37L1Q7L3B6 337 aa6.29□□□□□ -1.4
CASC1-207ENST00000554533 GPATCH11Q8N954 259 aa6.29□□□□□ -1.4
CASC1-207ENST00000554533 SMG8Q8ND04 991 aaKnown RBP6.29□□□□□ -1.4
CASC1-207ENST00000554533 CDC6Q99741 560 aa6.29□□□□□ -1.4
CASC1-207ENST00000554533 AARSD1Q9BTE6 412 aaKnown RBP6.29□□□□□ -1.4
CASC1-207ENST00000554533 GSX1Q9H4S2 264 aaPredicted RBP6.29□□□□□ -1.4
CASC1-207ENST00000554533 COL17A1Q9UMD9 1497 aaPredicted RBP6.28□□□□□ -1.4
CASC1-207ENST00000554533 TRBV23-1A0A0A0MS06 115 aa6.28□□□□□ -1.4
CASC1-207ENST00000554533 CCDC163A0A0D9SF12 145 aa6.28□□□□□ -1.4
CASC1-207ENST00000554533 SHOXO15266 292 aa6.28□□□□□ -1.4
CASC1-207ENST00000554533 PDE8AO60658 829 aa6.28□□□□□ -1.4
CASC1-207ENST00000554533 TIAF1O95411 115 aa6.28□□□□□ -1.4
CASC1-207ENST00000554533 SOX4Q06945 474 aaPredicted RBP6.28□□□□□ -1.4
CASC1-207ENST00000554533 DYMQ7RTS9 669 aa6.28□□□□□ -1.4
CASC1-207ENST00000554533 CCDC144CPQ8IYA2 1237 aa6.28□□□□□ -1.4
CASC1-207ENST00000554533 SMAP1Q8IYB5 467 aaPredicted RBP6.28□□□□□ -1.4
CASC1-207ENST00000554533 UBR7Q8N806 425 aa6.28□□□□□ -1.4
CASC1-207ENST00000554533 LRRN4CLQ8ND94 238 aa6.28□□□□□ -1.4
CASC1-207ENST00000554533 PPP1R14AQ96A00 147 aa6.28□□□□□ -1.4
CASC1-207ENST00000554533 TRIM11Q96F44 468 aa6.28□□□□□ -1.4
CASC1-207ENST00000554533 RNF208Q9H0X6 261 aa6.28□□□□□ -1.4
CASC1-207ENST00000554533 LRRC4BQ9NT99 713 aa6.28□□□□□ -1.4
CASC1-207ENST00000554533 FAM105AQ9NUU6 356 aa6.28□□□□□ -1.4
CASC1-207ENST00000554533 G3BP2Q9UN86 482 aaKnown RBP6.28□□□□□ -1.4
CASC1-207ENST00000554533 ZNF451Q9Y4E5 1061 aa6.28□□□□□ -1.4
CASC1-207ENST00000554533 ACTL7BQ9Y614 415 aa6.28□□□□□ -1.4
CASC1-207ENST00000554533 CTTNBP2Q8WZ74 1663 aa6.28□□□□□ -1.4
CASC1-207ENST00000554533 CLASP1Q7Z460 1538 aa6.28□□□□□ -1.4
CASC1-207ENST00000554533 PLD2O14939 933 aa6.27□□□□□ -1.4
CASC1-207ENST00000554533 RNF180Q86T96 592 aa6.27□□□□□ -1.4
CASC1-207ENST00000554533 WHAMMQ8TF30 809 aa6.27□□□□□ -1.4
CASC1-207ENST00000554533 CHAC2Q8WUX2 184 aa6.27□□□□□ -1.4
CASC1-207ENST00000554533 ANP32BQ92688 251 aaKnown RBP6.27□□□□□ -1.4
CASC1-207ENST00000554533 SMARCC1Q92922 1105 aaPredicted RBP6.27□□□□□ -1.4
CASC1-207ENST00000554533 IER2Q9BTL4 223 aa6.27□□□□□ -1.4
CASC1-207ENST00000554533 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.27□□□□□ -1.4
CASC1-207ENST00000554533 CYP4F12Q9HCS2 524 aa6.27□□□□□ -1.4
CASC1-207ENST00000554533 LRP2BPQ9P2M1 347 aa6.27□□□□□ -1.4
CASC1-207ENST00000554533 ATP8A1Q9Y2Q0 1164 aa6.27□□□□□ -1.4
CASC1-207ENST00000554533 NUP160Q12769 1436 aa6.27□□□□□ -1.41
CASC1-207ENST00000554533 RNGTTO60942 597 aaKnown RBP6.27□□□□□ -1.41
CASC1-207ENST00000554533 NAT2P11245 290 aa6.27□□□□□ -1.41
CASC1-207ENST00000554533 SDSP20132 328 aa6.27□□□□□ -1.41
CASC1-207ENST00000554533 ARMCX6Q7L4S7 300 aa6.27□□□□□ -1.41
CASC1-207ENST00000554533 KCT2Q8NC54 265 aa6.27□□□□□ -1.41
CASC1-207ENST00000554533 C2CD4AQ8NCU7 369 aaPredicted RBP6.27□□□□□ -1.41
CASC1-207ENST00000554533 OSBP2Q969R2 916 aa6.27□□□□□ -1.41
CASC1-207ENST00000554533 FOXQ1Q9C009 403 aa6.27□□□□□ -1.41
CASC1-207ENST00000554533 TYW1Q9NV66 732 aaKnown RBP6.27□□□□□ -1.41
CASC1-207ENST00000554533 PRXQ9BXM0 1461 aa6.27□□□□□ -1.41
CASC1-207ENST00000554533 GSG1L2A8MUP6 293 aa6.26□□□□□ -1.41
CASC1-207ENST00000554533 S100BP04271 92 aaPredicted RBP6.26□□□□□ -1.41
CASC1-207ENST00000554533 ASPAP45381 313 aa6.26□□□□□ -1.41
CASC1-207ENST00000554533 SETQ01105 290 aaPredicted RBP6.26□□□□□ -1.41
CASC1-207ENST00000554533 FNDC3BQ53EP0 1204 aaKnown RBP6.26□□□□□ -1.41
CASC1-207ENST00000554533 LCE2CQ5TA81 110 aa6.26□□□□□ -1.41
CASC1-207ENST00000554533 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.26□□□□□ -1.41
CASC1-207ENST00000554533 DNAJB8Q8NHS0 232 aa6.26□□□□□ -1.41
CASC1-207ENST00000554533 IRF7Q92985 503 aa6.26□□□□□ -1.41
CASC1-207ENST00000554533 MKRN2Q9H000 416 aaKnown RBP6.26□□□□□ -1.41
CASC1-207ENST00000554533 PNNQ9H307 717 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms