RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 MKNK2Q9HBH9 465 aa12.42□□□□□ -0.42
PTCD2P1-201ENST00000554393 PLIN4Q96Q06 1357 aa12.42□□□□□ -0.42
PTCD2P1-201ENST00000554393 CEP290O15078 2479 aa12.42□□□□□ -0.42
PTCD2P1-201ENST00000554393 IGHDP01880 384 aa12.41□□□□□ -0.42
PTCD2P1-201ENST00000554393 SLC3A2P08195 630 aaKnown RBP12.41□□□□□ -0.42
PTCD2P1-201ENST00000554393 EEF2P13639 858 aaKnown RBP12.41□□□□□ -0.42
PTCD2P1-201ENST00000554393 NUCB1Q02818 461 aa12.41□□□□□ -0.42
PTCD2P1-201ENST00000554393 PLEKHH3Q7Z736 793 aa12.41□□□□□ -0.42
PTCD2P1-201ENST00000554393 CHD1LQ86WJ1 897 aa12.41□□□□□ -0.42
PTCD2P1-201ENST00000554393 CLEC10AQ8IUN9 316 aa12.41□□□□□ -0.42
PTCD2P1-201ENST00000554393 USP6NLQ92738 828 aa12.41□□□□□ -0.42
PTCD2P1-201ENST00000554393 SHISA4Q96DD7 197 aa12.41□□□□□ -0.42
PTCD2P1-201ENST00000554393 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.41□□□□□ -0.42
PTCD2P1-201ENST00000554393 NAPBQ9H115 298 aa12.41□□□□□ -0.42
PTCD2P1-201ENST00000554393 UNC93B1Q9H1C4 597 aa12.41□□□□□ -0.42
PTCD2P1-201ENST00000554393 OSBPL3Q9H4L5 887 aa12.41□□□□□ -0.42
PTCD2P1-201ENST00000554393 GOPCQ9HD26 462 aa12.41□□□□□ -0.42
PTCD2P1-201ENST00000554393 PAK6Q9NQU5 681 aaPredicted RBP12.41□□□□□ -0.42
PTCD2P1-201ENST00000554393 HELLSQ9NRZ9 838 aa12.41□□□□□ -0.42
PTCD2P1-201ENST00000554393 SYNPO2Q9UMS6 1093 aa12.41□□□□□ -0.42
PTCD2P1-201ENST00000554393 SUPT16HQ9Y5B9 1047 aaKnown RBP12.41□□□□□ -0.42
PTCD2P1-201ENST00000554393 UNC80Q8N2C7 3258 aa12.4□□□□□ -0.42
PTCD2P1-201ENST00000554393 PEX10O60683 326 aa12.4□□□□□ -0.42
PTCD2P1-201ENST00000554393 RGS2P41220 211 aa12.4□□□□□ -0.42
PTCD2P1-201ENST00000554393 PDE4BQ07343 736 aa12.4□□□□□ -0.42
PTCD2P1-201ENST00000554393 KIAA1755Q5JYT7 1200 aa12.4□□□□□ -0.42
PTCD2P1-201ENST00000554393 MORN1Q5T089 497 aa12.4□□□□□ -0.42
PTCD2P1-201ENST00000554393 SHCBP1Q8NEM2 672 aa12.4□□□□□ -0.42
PTCD2P1-201ENST00000554393 U2AF1L4Q8WU68 220 aaKnown RBP12.4□□□□□ -0.42
PTCD2P1-201ENST00000554393 APBA2Q99767 749 aa12.4□□□□□ -0.42
PTCD2P1-201ENST00000554393 BTBD7Q9P203 1132 aa12.4□□□□□ -0.42
PTCD2P1-201ENST00000554393 NYAP2Q9P242 653 aa12.4□□□□□ -0.42
PTCD2P1-201ENST00000554393 ZNFX1Q9P2E3 1918 aaKnown RBP12.4□□□□□ -0.42
PTCD2P1-201ENST00000554393 LAMA4Q16363 1823 aa12.39□□□□□ -0.43
PTCD2P1-201ENST00000554393 FRMPD3Q5JV73 1810 aa12.39□□□□□ -0.43
PTCD2P1-201ENST00000554393 IGKV6D-41A0A0C4DH26 115 aa12.39□□□□□ -0.43
PTCD2P1-201ENST00000554393 SLC15A5A6NIM6 579 aa12.39□□□□□ -0.43
PTCD2P1-201ENST00000554393 FLOT1O75955 427 aa12.39□□□□□ -0.43
PTCD2P1-201ENST00000554393 SGPL1O95470 568 aa12.39□□□□□ -0.43
PTCD2P1-201ENST00000554393 PSEN1P49768 467 aa12.39□□□□□ -0.43
PTCD2P1-201ENST00000554393 PPARAQ07869 468 aa12.39□□□□□ -0.43
PTCD2P1-201ENST00000554393 MAP2K5Q13163 448 aa12.39□□□□□ -0.43
PTCD2P1-201ENST00000554393 B4GALNT3Q6L9W6 998 aa12.39□□□□□ -0.43
PTCD2P1-201ENST00000554393 UBE2Q1Q7Z7E8 422 aa12.39□□□□□ -0.43
PTCD2P1-201ENST00000554393 PLEKHM2Q8IWE5 1019 aa12.39□□□□□ -0.43
PTCD2P1-201ENST00000554393 ZNF444Q8N0Y2 327 aaPredicted RBP12.39□□□□□ -0.43
PTCD2P1-201ENST00000554393 SPICE1Q8N0Z3 855 aa12.39□□□□□ -0.43
PTCD2P1-201ENST00000554393 TRIB2Q92519 343 aa12.39□□□□□ -0.43
PTCD2P1-201ENST00000554393 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.39□□□□□ -0.43
PTCD2P1-201ENST00000554393 CWC22Q9HCG8 908 aaKnown RBP12.39□□□□□ -0.43
PTCD2P1-201ENST00000554393 ZMYM6O95789 1325 aa12.38□□□□□ -0.43
PTCD2P1-201ENST00000554393 RPTORQ8N122 1335 aa12.38□□□□□ -0.43
PTCD2P1-201ENST00000554393 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.38□□□□□ -0.43
PTCD2P1-201ENST00000554393 FOXP2O15409 715 aa12.38□□□□□ -0.43
PTCD2P1-201ENST00000554393 HOXC6P09630 235 aa12.38□□□□□ -0.43
PTCD2P1-201ENST00000554393 ZKSCAN1P17029 563 aaPredicted RBP12.38□□□□□ -0.43
PTCD2P1-201ENST00000554393 CYP2B6P20813 491 aa12.38□□□□□ -0.43
PTCD2P1-201ENST00000554393 PTPREP23469 700 aa12.38□□□□□ -0.43
PTCD2P1-201ENST00000554393 TIE1P35590 1138 aa12.38□□□□□ -0.43
PTCD2P1-201ENST00000554393 ATP2B2Q01814 1243 aa12.38□□□□□ -0.43
PTCD2P1-201ENST00000554393 GRB14Q14449 540 aa12.38□□□□□ -0.43
PTCD2P1-201ENST00000554393 ALX1Q15699 326 aa12.38□□□□□ -0.43
PTCD2P1-201ENST00000554393 MCMDC2Q4G0Z9 681 aa12.38□□□□□ -0.43
PTCD2P1-201ENST00000554393 PPP4R3BQ5MIZ7 849 aa12.38□□□□□ -0.43
PTCD2P1-201ENST00000554393 MAP3K21Q5TCX8 1036 aa12.38□□□□□ -0.43
PTCD2P1-201ENST00000554393 MKL1Q969V6 931 aa12.38□□□□□ -0.43
PTCD2P1-201ENST00000554393 ZFP91Q96JP5 570 aaPredicted RBP12.38□□□□□ -0.43
PTCD2P1-201ENST00000554393 SPATC1LQ9H0A9 340 aa12.38□□□□□ -0.43
PTCD2P1-201ENST00000554393 CRISPLD2Q9H0B8 497 aa12.38□□□□□ -0.43
PTCD2P1-201ENST00000554393 HMX1Q9NP08 348 aaPredicted RBP12.38□□□□□ -0.43
PTCD2P1-201ENST00000554393 ANAPC4Q9UJX5 808 aa12.38□□□□□ -0.43
PTCD2P1-201ENST00000554393 ADAMTS5Q9UNA0 930 aa12.38□□□□□ -0.43
PTCD2P1-201ENST00000554393 IVNS1ABPQ9Y6Y0 642 aa12.38□□□□□ -0.43
PTCD2P1-201ENST00000554393 RANBP2P49792 3224 aaKnown RBP12.38□□□□□ -0.43
PTCD2P1-201ENST00000554393 STRNO43815 780 aa12.37□□□□□ -0.43
PTCD2P1-201ENST00000554393 CCDC129Q6ZRS4 1044 aa12.37□□□□□ -0.43
PTCD2P1-201ENST00000554393 STK11IPQ8N1F8 1099 aa12.37□□□□□ -0.43
PTCD2P1-201ENST00000554393 NEDD1Q8NHV4 660 aa12.37□□□□□ -0.43
PTCD2P1-201ENST00000554393 ATG4CQ96DT6 458 aa12.37□□□□□ -0.43
PTCD2P1-201ENST00000554393 CEP95Q96GE4 821 aa12.37□□□□□ -0.43
PTCD2P1-201ENST00000554393 DEFB118Q96PH6 123 aa12.37□□□□□ -0.43
PTCD2P1-201ENST00000554393 MOV10L1Q9BXT6 1211 aaKnown RBP12.37□□□□□ -0.43
PTCD2P1-201ENST00000554393 MROH8Q9H579 483 aa12.37□□□□□ -0.43
PTCD2P1-201ENST00000554393 MTMR4Q9NYA4 1195 aa12.37□□□□□ -0.43
PTCD2P1-201ENST00000554393 PPP1R9AQ9ULJ8 1098 aa12.37□□□□□ -0.43
PTCD2P1-201ENST00000554393 TRPC6Q9Y210 931 aa12.37□□□□□ -0.43
PTCD2P1-201ENST00000554393 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.37□□□□□ -0.43
PTCD2P1-201ENST00000554393 PLXNA1Q9UIW2 1896 aa12.37□□□□□ -0.43
PTCD2P1-201ENST00000554393 A0A0D9SFI3 127 aa12.36□□□□□ -0.43
PTCD2P1-201ENST00000554393 TRIM6-TRIM34B2RNG4 842 aa12.36□□□□□ -0.43
PTCD2P1-201ENST00000554393 F5H6K3 240 aa12.36□□□□□ -0.43
PTCD2P1-201ENST00000554393 PRDM1O75626 825 aa12.36□□□□□ -0.43
PTCD2P1-201ENST00000554393 SLC25A27O95847 323 aa12.36□□□□□ -0.43
PTCD2P1-201ENST00000554393 TTLL1O95922 423 aa12.36□□□□□ -0.43
PTCD2P1-201ENST00000554393 NDUFB10O96000 172 aa12.36□□□□□ -0.43
PTCD2P1-201ENST00000554393 TSPY3P0CV98 308 aa12.36□□□□□ -0.43
PTCD2P1-201ENST00000554393 TSPY8P0CW00 308 aa12.36□□□□□ -0.43
PTCD2P1-201ENST00000554393 COPB2P35606 906 aa12.36□□□□□ -0.43
PTCD2P1-201ENST00000554393 MFAP1P55081 439 aaKnown RBP12.36□□□□□ -0.43
PTCD2P1-201ENST00000554393 KLRC3Q07444 240 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms