RNA–Protein interactions for RNA: ENST00000553312.1

AL079307.1-201, humanhuman

TSL 1 (best) BASIC

Gene AL079307.1, Length 5,982 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL079307.1-201ENST00000553312 IRX1P78414 480 aaPredicted RBP10.01□□□□□ -0.81
AL079307.1-201ENST00000553312 CDR2Q01850 454 aa10.01□□□□□ -0.81
AL079307.1-201ENST00000553312 DEUP1Q05D60 604 aa10.01□□□□□ -0.81
AL079307.1-201ENST00000553312 GRAMD1BQ3KR37 738 aa10.01□□□□□ -0.81
AL079307.1-201ENST00000553312 UHRF1BP1Q6BDS2 1440 aa10.01□□□□□ -0.81
AL079307.1-201ENST00000553312 CAPRIN2Q6IMN6 1127 aaKnown RBP10.01□□□□□ -0.81
AL079307.1-201ENST00000553312 CCDC141Q6ZP82 1450 aa10.01□□□□□ -0.81
AL079307.1-201ENST00000553312 KDM2BQ8NHM5 1336 aa10.01□□□□□ -0.81
AL079307.1-201ENST00000553312 U2AF1L4Q8WU68 220 aaKnown RBP10.01□□□□□ -0.81
AL079307.1-201ENST00000553312 RUNDC3BQ96NL0 473 aa10.01□□□□□ -0.81
AL079307.1-201ENST00000553312 DCTPP1Q9H773 170 aa10.01□□□□□ -0.81
AL079307.1-201ENST00000553312 ARHGEF11O15085 1522 aa10.01□□□□□ -0.81
AL079307.1-201ENST00000553312 LMNAP02545 664 aaKnown RBP10.01□□□□□ -0.81
AL079307.1-201ENST00000553312 NNTQ13423 1086 aa10.01□□□□□ -0.81
AL079307.1-201ENST00000553312 CCDC117Q8IWD4 279 aaPredicted RBP10.01□□□□□ -0.81
AL079307.1-201ENST00000553312 CNOT10Q9H9A5 744 aaKnown RBP10.01□□□□□ -0.81
AL079307.1-201ENST00000553312 KDM1AO60341 852 aa10.01□□□□□ -0.81
AL079307.1-201ENST00000553312 PDHA1P08559 390 aa10.01□□□□□ -0.81
AL079307.1-201ENST00000553312 CA8P35219 290 aa10.01□□□□□ -0.81
AL079307.1-201ENST00000553312 CLCN6P51797 869 aa10.01□□□□□ -0.81
AL079307.1-201ENST00000553312 PMS1P54277 932 aaKnown RBP10.01□□□□□ -0.81
AL079307.1-201ENST00000553312 JARID2Q92833 1246 aaPredicted RBP10.01□□□□□ -0.81
AL079307.1-201ENST00000553312 ANKRD65E5RJM6 399 aa10.01□□□□□ -0.81
AL079307.1-201ENST00000553312 E9PMD0 336 aa10.01□□□□□ -0.81
AL079307.1-201ENST00000553312 ATF2P15336 505 aa10.01□□□□□ -0.81
AL079307.1-201ENST00000553312 NBPF9Q3BBW0 867 aa10.01□□□□□ -0.81
AL079307.1-201ENST00000553312 TRIM60Q495X7 471 aa10.01□□□□□ -0.81
AL079307.1-201ENST00000553312 ARHGEF18Q6ZSZ5 1173 aa10.01□□□□□ -0.81
AL079307.1-201ENST00000553312 CAMSAP2Q08AD1 1489 aa10□□□□□ -0.81
AL079307.1-201ENST00000553312 CHGBP05060 677 aa10□□□□□ -0.81
AL079307.1-201ENST00000553312 GNAT2P19087 354 aa10□□□□□ -0.81
AL079307.1-201ENST00000553312 MSH2P43246 934 aa10□□□□□ -0.81
AL079307.1-201ENST00000553312 ATP2B3Q16720 1220 aa10□□□□□ -0.81
AL079307.1-201ENST00000553312 BBOF1Q8ND07 529 aa10□□□□□ -0.81
AL079307.1-201ENST00000553312 CYTH2Q99418 400 aa10□□□□□ -0.81
AL079307.1-201ENST00000553312 MCF2P10911 925 aa10□□□□□ -0.81
AL079307.1-201ENST00000553312 CASP2P42575 452 aa10□□□□□ -0.81
AL079307.1-201ENST00000553312 PNOCQ13519 176 aa10□□□□□ -0.81
AL079307.1-201ENST00000553312 USHBP1Q8N6Y0 703 aa10□□□□□ -0.81
AL079307.1-201ENST00000553312 ATG3Q9NT62 314 aa10□□□□□ -0.81
AL079307.1-201ENST00000553312 DAAM1Q9Y4D1 1078 aa10□□□□□ -0.81
AL079307.1-201ENST00000553312 CCDC151A5D8V7 595 aa10□□□□□ -0.81
AL079307.1-201ENST00000553312 DEXIO95424 95 aa10□□□□□ -0.81
AL079307.1-201ENST00000553312 HARSP12081 509 aaKnown RBP10□□□□□ -0.81
AL079307.1-201ENST00000553312 ABCB4P21439 1286 aa10□□□□□ -0.81
AL079307.1-201ENST00000553312 KCNA4P22459 653 aa10□□□□□ -0.81
AL079307.1-201ENST00000553312 PIK3AP1Q6ZUJ8 805 aa10□□□□□ -0.81
AL079307.1-201ENST00000553312 MAP7D3Q8IWC1 876 aa10□□□□□ -0.81
AL079307.1-201ENST00000553312 TRPC5Q9UL62 973 aaPredicted RBP10□□□□□ -0.81
AL079307.1-201ENST00000553312 PASKQ96RG2 1323 aa10□□□□□ -0.81
AL079307.1-201ENST00000553312 POC1B-GALNT4F8VUJ3 575 aa10□□□□□ -0.81
AL079307.1-201ENST00000553312 C6orf229H3BNL8 230 aa10□□□□□ -0.81
AL079307.1-201ENST00000553312 DKC1O60832 514 aaKnown RBP eCLIP10□□□□□ -0.81
AL079307.1-201ENST00000553312 RWDD2BP57060 319 aa10□□□□□ -0.81
AL079307.1-201ENST00000553312 NUDT16Q96DE0 195 aaKnown RBP10□□□□□ -0.81
AL079307.1-201ENST00000553312 DTNBP1Q96EV8 351 aa10□□□□□ -0.81
AL079307.1-201ENST00000553312 FGD4Q96M96 766 aa10□□□□□ -0.81
AL079307.1-201ENST00000553312 EMILIN1Q9Y6C2 1016 aa10□□□□□ -0.81
AL079307.1-201ENST00000553312 DNAJC6O75061 913 aa10□□□□□ -0.81
AL079307.1-201ENST00000553312 PTPROQ16827 1216 aa10□□□□□ -0.81
AL079307.1-201ENST00000553312 GJC2Q5T442 439 aaPredicted RBP10□□□□□ -0.81
AL079307.1-201ENST00000553312 TRMT10CQ7L0Y3 403 aaKnown RBP10□□□□□ -0.81
AL079307.1-201ENST00000553312 CDC37L1Q7L3B6 337 aa10□□□□□ -0.81
AL079307.1-201ENST00000553312 ADAT2Q7Z6V5 191 aaKnown RBP10□□□□□ -0.81
AL079307.1-201ENST00000553312 ARHGAP18Q8N392 663 aa10□□□□□ -0.81
AL079307.1-201ENST00000553312 FAM167BQ9BTA0 163 aa10□□□□□ -0.81
AL079307.1-201ENST00000553312 SPZ1Q9BXG8 430 aa10□□□□□ -0.81
AL079307.1-201ENST00000553312 CLEC11AQ9Y240 323 aa10□□□□□ -0.81
AL079307.1-201ENST00000553312 URB2Q14146 1524 aaKnown RBP9.99□□□□□ -0.81
AL079307.1-201ENST00000553312 ADCY1Q08828 1119 aa9.99□□□□□ -0.81
AL079307.1-201ENST00000553312 TRIM42Q8IWZ5 723 aa9.99□□□□□ -0.81
AL079307.1-201ENST00000553312 HDAC11Q96DB2 347 aa9.99□□□□□ -0.81
AL079307.1-201ENST00000553312 RAB20Q9NX57 234 aa9.99□□□□□ -0.81
AL079307.1-201ENST00000553312 MAD1L1Q9Y6D9 718 aa9.99□□□□□ -0.81
AL079307.1-201ENST00000553312 ZMYND10O75800 440 aa9.99□□□□□ -0.81
AL079307.1-201ENST00000553312 NR1D1P20393 614 aa9.99□□□□□ -0.81
AL079307.1-201ENST00000553312 MRPS15P82914 257 aaKnown RBP9.99□□□□□ -0.81
AL079307.1-201ENST00000553312 LSM14BQ9BX40 385 aaKnown RBP9.99□□□□□ -0.81
AL079307.1-201ENST00000553312 DDX28Q9NUL7 540 aaKnown RBP9.99□□□□□ -0.81
AL079307.1-201ENST00000553312 TTLL3Q9Y4R7 772 aa9.99□□□□□ -0.81
AL079307.1-201ENST00000553312 ZNF608Q9ULD9 1512 aaPredicted RBP9.99□□□□□ -0.81
AL079307.1-201ENST00000553312 PHLPP2Q6ZVD8 1323 aa9.99□□□□□ -0.81
AL079307.1-201ENST00000553312 MAGEB6P1A0A0J9YX57 407 aa9.99□□□□□ -0.81
AL079307.1-201ENST00000553312 KCNJ18B7U540 433 aa9.99□□□□□ -0.81
AL079307.1-201ENST00000553312 FOXO3O43524 673 aa9.99□□□□□ -0.81
AL079307.1-201ENST00000553312 SPAG7O75391 227 aa9.99□□□□□ -0.81
AL079307.1-201ENST00000553312 SMTNP53814 917 aa9.99□□□□□ -0.81
AL079307.1-201ENST00000553312 NOP14P78316 857 aaKnown RBP9.99□□□□□ -0.81
AL079307.1-201ENST00000553312 KCNJ12Q14500 433 aa9.99□□□□□ -0.81
AL079307.1-201ENST00000553312 ANKRD35Q8N283 1001 aa9.99□□□□□ -0.81
AL079307.1-201ENST00000553312 CAPN11Q9UMQ6 739 aa9.99□□□□□ -0.81
AL079307.1-201ENST00000553312 FAM83GA6ND36 823 aa9.99□□□□□ -0.81
AL079307.1-201ENST00000553312 STX1BP61266 288 aa9.99□□□□□ -0.81
AL079307.1-201ENST00000553312 ACTN3Q08043 901 aaPredicted RBP9.99□□□□□ -0.81
AL079307.1-201ENST00000553312 TMEM259Q4ZIN3 620 aa9.99□□□□□ -0.81
AL079307.1-201ENST00000553312 HAUS3Q68CZ6 603 aa9.99□□□□□ -0.81
AL079307.1-201ENST00000553312 PAWRQ96IZ0 340 aaKnown RBP9.99□□□□□ -0.81
AL079307.1-201ENST00000553312 PARD6BQ9BYG5 372 aa9.99□□□□□ -0.81
AL079307.1-201ENST00000553312 NCKAP5LQ9HCH0 1330 aa9.99□□□□□ -0.81
AL079307.1-201ENST00000553312 DAPK1P53355 1430 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms