RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 SAMD1Q6SPF0 538 aaPredicted RBP11.27□□□□□ -0.61
CHD8-203ENST00000553283 LRRCC1Q9C099 1032 aa11.27□□□□□ -0.61
CHD8-203ENST00000553283 NRBP1Q9UHY1 535 aa11.27□□□□□ -0.61
CHD8-203ENST00000553283 RCAN3Q9UKA8 241 aa11.27□□□□□ -0.61
CHD8-203ENST00000553283 ATP11BQ9Y2G3 1177 aa11.27□□□□□ -0.61
CHD8-203ENST00000553283 STXBP5LQ9Y2K9 1186 aa11.27□□□□□ -0.61
CHD8-203ENST00000553283 NAV1Q8NEY1 1877 aa11.26□□□□□ -0.61
CHD8-203ENST00000553283 POTEB2H3BUK9 544 aa11.26□□□□□ -0.61
CHD8-203ENST00000553283 VWA5AO00534 786 aa11.26□□□□□ -0.61
CHD8-203ENST00000553283 MYCNP04198 464 aaPredicted RBP11.26□□□□□ -0.61
CHD8-203ENST00000553283 SNX17Q15036 470 aa11.26□□□□□ -0.61
CHD8-203ENST00000553283 SBK1Q52WX2 424 aa11.26□□□□□ -0.61
CHD8-203ENST00000553283 FAM109BQ6ICB4 259 aaPredicted RBP11.26□□□□□ -0.61
CHD8-203ENST00000553283 RIOX2Q8IUF8 465 aa11.26□□□□□ -0.61
CHD8-203ENST00000553283 STRBPQ96SI9 672 aaKnown RBP11.26□□□□□ -0.61
CHD8-203ENST00000553283 MMP19Q99542 508 aa11.26□□□□□ -0.61
CHD8-203ENST00000553283 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.26□□□□□ -0.61
CHD8-203ENST00000553283 GOPCQ9HD26 462 aa11.26□□□□□ -0.61
CHD8-203ENST00000553283 ECHDC1Q9NTX5 307 aa11.26□□□□□ -0.61
CHD8-203ENST00000553283 FBXO28Q9NVF7 368 aa11.26□□□□□ -0.61
CHD8-203ENST00000553283 PPP1R9AQ9ULJ8 1098 aa11.26□□□□□ -0.61
CHD8-203ENST00000553283 DIS3Q9Y2L1 958 aaKnown RBP11.26□□□□□ -0.61
CHD8-203ENST00000553283 A0A0C4DFX4 3053 aa11.25□□□□□ -0.61
CHD8-203ENST00000553283 RLFQ13129 1914 aa11.25□□□□□ -0.61
CHD8-203ENST00000553283 SMARCA5O60264 1052 aaPredicted RBP11.25□□□□□ -0.61
CHD8-203ENST00000553283 PGK2P07205 417 aa11.25□□□□□ -0.61
CHD8-203ENST00000553283 COPB2P35606 906 aa11.25□□□□□ -0.61
CHD8-203ENST00000553283 ADCYAP1R1P41586 468 aa11.25□□□□□ -0.61
CHD8-203ENST00000553283 KCTD2Q14681 263 aa11.25□□□□□ -0.61
CHD8-203ENST00000553283 LRRC41Q15345 812 aa11.25□□□□□ -0.61
CHD8-203ENST00000553283 ZNF792Q3KQV3 632 aa11.25□□□□□ -0.61
CHD8-203ENST00000553283 FAM83BQ5T0W9 1011 aa11.25□□□□□ -0.61
CHD8-203ENST00000553283 C1orf53Q5VUE5 145 aa11.25□□□□□ -0.61
CHD8-203ENST00000553283 GIMAP6Q6P9H5 292 aa11.25□□□□□ -0.61
CHD8-203ENST00000553283 REPS2Q8NFH8 660 aa11.25□□□□□ -0.61
CHD8-203ENST00000553283 TINF2Q9BSI4 451 aa11.25□□□□□ -0.61
CHD8-203ENST00000553283 ARPP21Q9UBL0 812 aaPredicted RBP11.25□□□□□ -0.61
CHD8-203ENST00000553283 ZNF214Q9UL59 606 aaPredicted RBP11.25□□□□□ -0.61
CHD8-203ENST00000553283 ZNF236Q9UL36 1845 aa11.24□□□□□ -0.61
CHD8-203ENST00000553283 GSG1L2A8MUP6 293 aa11.24□□□□□ -0.61
CHD8-203ENST00000553283 RAD21O60216 631 aa11.24□□□□□ -0.61
CHD8-203ENST00000553283 RARBP10826 455 aa11.24□□□□□ -0.61
CHD8-203ENST00000553283 TRIM60Q495X7 471 aa11.24□□□□□ -0.61
CHD8-203ENST00000553283 FAM47AQ5JRC9 791 aa11.24□□□□□ -0.61
CHD8-203ENST00000553283 C20orf194Q5TEA3 1177 aa11.24□□□□□ -0.61
CHD8-203ENST00000553283 FERMT2Q96AC1 680 aa11.24□□□□□ -0.61
CHD8-203ENST00000553283 NYAP2Q9P242 653 aa11.24□□□□□ -0.61
CHD8-203ENST00000553283 PHF24Q9UPV7 400 aa11.24□□□□□ -0.61
CHD8-203ENST00000553283 COL6A3P12111 3177 aa11.24□□□□□ -0.61
CHD8-203ENST00000553283 F5H6K3 240 aa11.23□□□□□ -0.61
CHD8-203ENST00000553283 RNF113AO15541 343 aaKnown RBP11.23□□□□□ -0.61
CHD8-203ENST00000553283 TAL1P17542 331 aaPredicted RBP11.23□□□□□ -0.61
CHD8-203ENST00000553283 RASA1P20936 1047 aa11.23□□□□□ -0.61
CHD8-203ENST00000553283 TLE2Q04725 743 aa11.23□□□□□ -0.61
CHD8-203ENST00000553283 KLRC3Q07444 240 aa11.23□□□□□ -0.61
CHD8-203ENST00000553283 SHHQ15465 462 aa11.23□□□□□ -0.61
CHD8-203ENST00000553283 RNF180Q86T96 592 aa11.23□□□□□ -0.61
CHD8-203ENST00000553283 KBTBD3Q8NAB2 608 aa11.23□□□□□ -0.61
CHD8-203ENST00000553283 BADQ92934 168 aa11.23□□□□□ -0.61
CHD8-203ENST00000553283 OSBP2Q969R2 916 aa11.23□□□□□ -0.61
CHD8-203ENST00000553283 SLF1Q9BQI6 1058 aa11.23□□□□□ -0.61
CHD8-203ENST00000553283 DCTPP1Q9H773 170 aa11.23□□□□□ -0.61
CHD8-203ENST00000553283 MKNK2Q9HBH9 465 aa11.23□□□□□ -0.61
CHD8-203ENST00000553283 XPNPEP3Q9NQH7 507 aa11.23□□□□□ -0.61
CHD8-203ENST00000553283 PRDM5Q9NQX1 630 aaPredicted RBP11.23□□□□□ -0.61
CHD8-203ENST00000553283 PDLIM7Q9NR12 457 aa11.23□□□□□ -0.61
CHD8-203ENST00000553283 DNAH12Q6ZR08 3092 aa11.23□□□□□ -0.61
CHD8-203ENST00000553283 A0A0G2JMZ2 1700 aa11.23□□□□□ -0.61
CHD8-203ENST00000553283 TRIM43BA6NCK2 446 aa11.22□□□□□ -0.61
CHD8-203ENST00000553283 MINDY4BA8MYZ0 360 aa11.22□□□□□ -0.61
CHD8-203ENST00000553283 PGK1P00558 417 aa11.22□□□□□ -0.61
CHD8-203ENST00000553283 ZNF865P0CJ78 1059 aaPredicted RBP11.22□□□□□ -0.61
CHD8-203ENST00000553283 SH3RF1Q7Z6J0 888 aa11.22□□□□□ -0.61
CHD8-203ENST00000553283 STK11IPQ8N1F8 1099 aa11.22□□□□□ -0.61
CHD8-203ENST00000553283 MSL3Q8N5Y2 521 aaKnown RBP11.22□□□□□ -0.61
CHD8-203ENST00000553283 PRPF38AQ8NAV1 312 aaKnown RBP11.22□□□□□ -0.61
CHD8-203ENST00000553283 APPBP2Q92624 585 aa11.22□□□□□ -0.61
CHD8-203ENST00000553283 MKL1Q969V6 931 aa11.22□□□□□ -0.61
CHD8-203ENST00000553283 TRIM43Q96BQ3 446 aaPredicted RBP11.22□□□□□ -0.61
CHD8-203ENST00000553283 GUCD1Q96NT3 240 aa11.22□□□□□ -0.61
CHD8-203ENST00000553283 NUP88Q99567 741 aaPredicted RBP11.22□□□□□ -0.61
CHD8-203ENST00000553283 TEX13BQ9BXU2 312 aa11.22□□□□□ -0.61
CHD8-203ENST00000553283 CNPY2Q9Y2B0 182 aa11.22□□□□□ -0.61
CHD8-203ENST00000553283 BAZ2AQ9UIF9 1905 aaKnown RBP11.21□□□□□ -0.61
CHD8-203ENST00000553283 FRMPD3Q5JV73 1810 aa11.21□□□□□ -0.61
CHD8-203ENST00000553283 IGKV6D-41A0A0C4DH26 115 aa11.21□□□□□ -0.61
CHD8-203ENST00000553283 ATP2A1O14983 1001 aa11.21□□□□□ -0.61
CHD8-203ENST00000553283 NDUFB10O96000 172 aa11.21□□□□□ -0.61
CHD8-203ENST00000553283 ZFYP08048 801 aaPredicted RBP11.21□□□□□ -0.61
CHD8-203ENST00000553283 AKR1A1P14550 325 aa11.21□□□□□ -0.61
CHD8-203ENST00000553283 GNAT2P19087 354 aa11.21□□□□□ -0.61
CHD8-203ENST00000553283 C9orf50Q5SZB4 431 aa11.21□□□□□ -0.61
CHD8-203ENST00000553283 SNRNP48Q6IEG0 339 aaKnown RBP11.21□□□□□ -0.61
CHD8-203ENST00000553283 ZNF444Q8N0Y2 327 aaPredicted RBP11.21□□□□□ -0.61
CHD8-203ENST00000553283 DDX11Q96FC9 970 aa11.21□□□□□ -0.61
CHD8-203ENST00000553283 GPATCH3Q96I76 525 aa11.21□□□□□ -0.61
CHD8-203ENST00000553283 TSEN34Q9BSV6 310 aaKnown RBP11.21□□□□□ -0.61
CHD8-203ENST00000553283 ZNF287Q9HBT7 754 aa11.21□□□□□ -0.61
CHD8-203ENST00000553283 CLIP2Q9UDT6 1046 aa11.21□□□□□ -0.61
CHD8-203ENST00000553283 RIPK3Q9Y572 518 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms