RNA–Protein interactions for RNA: ENST00000550771.5

CACNB3-218, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-218ENST00000550771 DEFB123Q8N688 67 aa24.79■■□□□ 1.56
CACNB3-218ENST00000550771 STRBPQ96SI9 672 aaKnown RBP24.79■■□□□ 1.56
CACNB3-218ENST00000550771 LBHD1Q9BQE6 289 aaPredicted RBP24.79■■□□□ 1.56
CACNB3-218ENST00000550771 GJC2Q5T442 439 aaPredicted RBP24.78■■□□□ 1.56
CACNB3-218ENST00000550771 GIMAP6Q6P9H5 292 aa24.78■■□□□ 1.56
CACNB3-218ENST00000550771 SAMD1Q6SPF0 538 aaPredicted RBP24.78■■□□□ 1.56
CACNB3-218ENST00000550771 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.78■■□□□ 1.56
CACNB3-218ENST00000550771 FBXO28Q9NVF7 368 aa24.78■■□□□ 1.56
CACNB3-218ENST00000550771 NRBP1Q9UHY1 535 aa24.78■■□□□ 1.56
CACNB3-218ENST00000550771 PPP1R9AQ9ULJ8 1098 aa24.78■■□□□ 1.56
CACNB3-218ENST00000550771 MYH8P13535 1937 aa24.78■■□□□ 1.56
CACNB3-218ENST00000550771 KBTBD13C9JR72 458 aa24.77■■□□□ 1.56
CACNB3-218ENST00000550771 VWA5AO00534 786 aa24.77■■□□□ 1.56
CACNB3-218ENST00000550771 COPB2P35606 906 aa24.77■■□□□ 1.56
CACNB3-218ENST00000550771 RTP1P59025 263 aa24.77■■□□□ 1.56
CACNB3-218ENST00000550771 KBTBD3Q8NAB2 608 aa24.77■■□□□ 1.56
CACNB3-218ENST00000550771 PRKAG2Q9UGJ0 569 aa24.77■■□□□ 1.56
CACNB3-218ENST00000550771 STAT3P40763 770 aa24.76■■□□□ 1.55
CACNB3-218ENST00000550771 PRAMEF19Q5SWL8 479 aa24.76■■□□□ 1.55
CACNB3-218ENST00000550771 ANO1Q5XXA6 986 aa24.76■■□□□ 1.55
CACNB3-218ENST00000550771 SLC17A8Q8NDX2 589 aa24.76■■□□□ 1.55
CACNB3-218ENST00000550771 GPATCH3Q96I76 525 aa24.76■■□□□ 1.55
CACNB3-218ENST00000550771 MMP19Q99542 508 aa24.76■■□□□ 1.55
CACNB3-218ENST00000550771 DCTPP1Q9H773 170 aa24.76■■□□□ 1.55
CACNB3-218ENST00000550771 DIS3Q9Y2L1 958 aaKnown RBP24.76■■□□□ 1.55
CACNB3-218ENST00000550771 MYH7P12883 1935 aa24.75■■□□□ 1.55
CACNB3-218ENST00000550771 GSG1L2A8MUP6 293 aa24.75■■□□□ 1.55
CACNB3-218ENST00000550771 SNX17Q15036 470 aa24.75■■□□□ 1.55
CACNB3-218ENST00000550771 FAM83BQ5T0W9 1011 aa24.75■■□□□ 1.55
CACNB3-218ENST00000550771 SLC39A5Q6ZMH5 540 aa24.75■■□□□ 1.55
CACNB3-218ENST00000550771 REPS2Q8NFH8 660 aa24.75■■□□□ 1.55
CACNB3-218ENST00000550771 APPBP2Q92624 585 aa24.75■■□□□ 1.55
CACNB3-218ENST00000550771 ZNF214Q9UL59 606 aaPredicted RBP24.75■■□□□ 1.55
CACNB3-218ENST00000550771 KCTD2Q14681 263 aa24.74■■□□□ 1.55
CACNB3-218ENST00000550771 OSBP2Q969R2 916 aa24.74■■□□□ 1.55
CACNB3-218ENST00000550771 MTMR10Q9NXD2 777 aa24.74■■□□□ 1.55
CACNB3-218ENST00000550771 NYAP2Q9P242 653 aa24.74■■□□□ 1.55
CACNB3-218ENST00000550771 PARP14Q460N5 1801 aa24.73■■□□□ 1.55
CACNB3-218ENST00000550771 ROBO3Q96MS0 1386 aa24.73■■□□□ 1.55
CACNB3-218ENST00000550771 RASA1P20936 1047 aa24.73■■□□□ 1.55
CACNB3-218ENST00000550771 LRRC41Q15345 812 aa24.73■■□□□ 1.55
CACNB3-218ENST00000550771 ZNF792Q3KQV3 632 aa24.73■■□□□ 1.55
CACNB3-218ENST00000550771 Q7L0L9 218 aa24.73■■□□□ 1.55
CACNB3-218ENST00000550771 MKNK2Q9HBH9 465 aa24.73■■□□□ 1.55
CACNB3-218ENST00000550771 ATP11BQ9Y2G3 1177 aa24.73■■□□□ 1.55
CACNB3-218ENST00000550771 RNF113AO15541 343 aaKnown RBP24.72■■□□□ 1.55
CACNB3-218ENST00000550771 RAD21O60216 631 aa24.72■■□□□ 1.55
CACNB3-218ENST00000550771 ZFYP08048 801 aaPredicted RBP24.72■■□□□ 1.55
CACNB3-218ENST00000550771 FAM47AQ5JRC9 791 aa24.72■■□□□ 1.55
CACNB3-218ENST00000550771 C1orf53Q5VUE5 145 aa24.72■■□□□ 1.55
CACNB3-218ENST00000550771 SLF1Q9BQI6 1058 aa24.72■■□□□ 1.55
CACNB3-218ENST00000550771 TINF2Q9BSI4 451 aa24.72■■□□□ 1.55
CACNB3-218ENST00000550771 STXBP5LQ9Y2K9 1186 aa24.72■■□□□ 1.55
CACNB3-218ENST00000550771 MINDY4BA8MYZ0 360 aa24.71■■□□□ 1.55
CACNB3-218ENST00000550771 PGK2P07205 417 aa24.71■■□□□ 1.55
CACNB3-218ENST00000550771 RARBP10826 455 aa24.71■■□□□ 1.55
CACNB3-218ENST00000550771 GNAT2P19087 354 aa24.71■■□□□ 1.55
CACNB3-218ENST00000550771 ZNF287Q9HBT7 754 aa24.71■■□□□ 1.55
CACNB3-218ENST00000550771 F5H6K3 240 aa24.7■■□□□ 1.54
CACNB3-218ENST00000550771 GPAA1O43292 621 aa24.7■■□□□ 1.54
CACNB3-218ENST00000550771 MYCNP04198 464 aaPredicted RBP24.7■■□□□ 1.54
CACNB3-218ENST00000550771 ADCYAP1R1P41586 468 aa24.7■■□□□ 1.54
CACNB3-218ENST00000550771 KLRC3Q07444 240 aa24.7■■□□□ 1.54
CACNB3-218ENST00000550771 TEX13BQ9BXU2 312 aa24.7■■□□□ 1.54
CACNB3-218ENST00000550771 GREB1LQ9C091 1923 aaPredicted RBP24.69■■□□□ 1.54
CACNB3-218ENST00000550771 NDUFB10O96000 172 aa24.69■■□□□ 1.54
CACNB3-218ENST00000550771 LRRFIP1Q32MZ4 808 aaKnown RBP24.69■■□□□ 1.54
CACNB3-218ENST00000550771 TRIM60Q495X7 471 aa24.69■■□□□ 1.54
CACNB3-218ENST00000550771 FAM109BQ6ICB4 259 aaPredicted RBP24.69■■□□□ 1.54
CACNB3-218ENST00000550771 MSL3Q8N5Y2 521 aaKnown RBP24.69■■□□□ 1.54
CACNB3-218ENST00000550771 NUP88Q99567 741 aaPredicted RBP24.69■■□□□ 1.54
CACNB3-218ENST00000550771 EPB41L4AQ9HCS5 686 aaPredicted RBP24.69■■□□□ 1.54
CACNB3-218ENST00000550771 XPNPEP3Q9NQH7 507 aa24.69■■□□□ 1.54
CACNB3-218ENST00000550771 PHF24Q9UPV7 400 aa24.69■■□□□ 1.54
CACNB3-218ENST00000550771 COL6A3P12111 3177 aa24.68■■□□□ 1.54
CACNB3-218ENST00000550771 IGKV6D-41A0A0C4DH26 115 aa24.68■■□□□ 1.54
CACNB3-218ENST00000550771 TSHZ3Q63HK5 1081 aa24.68■■□□□ 1.54
CACNB3-218ENST00000550771 RNF180Q86T96 592 aa24.68■■□□□ 1.54
CACNB3-218ENST00000550771 STK11IPQ8N1F8 1099 aa24.68■■□□□ 1.54
CACNB3-218ENST00000550771 PRPF38AQ8NAV1 312 aaKnown RBP24.68■■□□□ 1.54
CACNB3-218ENST00000550771 SYNPO2Q9UMS6 1093 aa24.68■■□□□ 1.54
CACNB3-218ENST00000550771 POTEB2H3BUK9 544 aa24.67■■□□□ 1.54
CACNB3-218ENST00000550771 ATP2A1O14983 1001 aa24.67■■□□□ 1.54
CACNB3-218ENST00000550771 ZNF865P0CJ78 1059 aaPredicted RBP24.67■■□□□ 1.54
CACNB3-218ENST00000550771 AKR1A1P14550 325 aa24.67■■□□□ 1.54
CACNB3-218ENST00000550771 TDO2P48775 406 aa24.67■■□□□ 1.54
CACNB3-218ENST00000550771 ZNF444Q8N0Y2 327 aaPredicted RBP24.67■■□□□ 1.54
CACNB3-218ENST00000550771 MKL1Q969V6 931 aa24.67■■□□□ 1.54
CACNB3-218ENST00000550771 PRDM5Q9NQX1 630 aaPredicted RBP24.67■■□□□ 1.54
CACNB3-218ENST00000550771 COL11A1P12107 1806 aaPredicted RBP24.67■■□□□ 1.54
CACNB3-218ENST00000550771 PATL2C9JE40 543 aaKnown RBP24.66■■□□□ 1.54
CACNB3-218ENST00000550771 M0R2C6 588 aa24.66■■□□□ 1.54
CACNB3-218ENST00000550771 SNRNP48Q6IEG0 339 aaKnown RBP24.66■■□□□ 1.54
CACNB3-218ENST00000550771 FERMT2Q96AC1 680 aa24.66■■□□□ 1.54
CACNB3-218ENST00000550771 PDLIM7Q9NR12 457 aa24.66■■□□□ 1.54
CACNB3-218ENST00000550771 CLIP2Q9UDT6 1046 aa24.66■■□□□ 1.54
CACNB3-218ENST00000550771 CNPY2Q9Y2B0 182 aa24.66■■□□□ 1.54
CACNB3-218ENST00000550771 TTC41PQ6P2S7 1318 aa24.65■■□□□ 1.54
CACNB3-218ENST00000550771 ZNFX1Q9P2E3 1918 aaKnown RBP24.65■■□□□ 1.54
CACNB3-218ENST00000550771 DLL1O00548 723 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms