RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 ACTN2P35609 894 aa13.65□□□□□ -0.22
NR4A1-215ENST00000550557 ASPRV1Q53RT3 343 aa13.65□□□□□ -0.22
NR4A1-215ENST00000550557 WDR44Q5JSH3 913 aa13.65□□□□□ -0.22
NR4A1-215ENST00000550557 ATL3Q6DD88 541 aa13.65□□□□□ -0.22
NR4A1-215ENST00000550557 FAM193BQ96PV7 902 aaPredicted RBP13.65□□□□□ -0.22
NR4A1-215ENST00000550557 ISCA1Q9BUE6 129 aa13.65□□□□□ -0.22
NR4A1-215ENST00000550557 TSPYL1Q9H0U9 437 aa13.65□□□□□ -0.22
NR4A1-215ENST00000550557 DNAJC25Q9H1X3 360 aa13.65□□□□□ -0.22
NR4A1-215ENST00000550557 SNAP23O00161 211 aa13.64□□□□□ -0.23
NR4A1-215ENST00000550557 STAT2P52630 851 aa13.64□□□□□ -0.23
NR4A1-215ENST00000550557 IGBP1P78318 339 aa13.64□□□□□ -0.23
NR4A1-215ENST00000550557 DEPTORQ8TB45 409 aa13.64□□□□□ -0.23
NR4A1-215ENST00000550557 MAP4K1Q92918 833 aa13.64□□□□□ -0.23
NR4A1-215ENST00000550557 NBPF26B4DH59 902 aa13.64□□□□□ -0.23
NR4A1-215ENST00000550557 KIAA0754O94854 1291 aa13.64□□□□□ -0.23
NR4A1-215ENST00000550557 GH2P01242 217 aa13.64□□□□□ -0.23
NR4A1-215ENST00000550557 ITPK1Q13572 414 aa13.64□□□□□ -0.23
NR4A1-215ENST00000550557 NBPF10Q6P3W6 841 aaKnown RBP13.64□□□□□ -0.23
NR4A1-215ENST00000550557 KCTD1Q719H9 257 aa13.64□□□□□ -0.23
NR4A1-215ENST00000550557 NBPF15Q8N660 670 aa13.64□□□□□ -0.23
NR4A1-215ENST00000550557 KCNJ14Q9UNX9 436 aa13.64□□□□□ -0.23
NR4A1-215ENST00000550557 PALM3A6NDB9 673 aaPredicted RBP13.64□□□□□ -0.23
NR4A1-215ENST00000550557 PTGS1P23219 599 aa13.64□□□□□ -0.23
NR4A1-215ENST00000550557 ADD2P35612 726 aa13.64□□□□□ -0.23
NR4A1-215ENST00000550557 FAM160B1Q5W0V3 765 aa13.64□□□□□ -0.23
NR4A1-215ENST00000550557 PLA2G4DQ86XP0 818 aa13.64□□□□□ -0.23
NR4A1-215ENST00000550557 NRBP2Q9NSY0 501 aa13.64□□□□□ -0.23
NR4A1-215ENST00000550557 ZSCAN12O43309 604 aa13.64□□□□□ -0.23
NR4A1-215ENST00000550557 KRT40Q6A162 431 aa13.64□□□□□ -0.23
NR4A1-215ENST00000550557 TMCO3Q6UWJ1 677 aa13.64□□□□□ -0.23
NR4A1-215ENST00000550557 ZBTB8OSQ8IWT0 167 aa13.64□□□□□ -0.23
NR4A1-215ENST00000550557 ATP6V0A2Q9Y487 856 aa13.64□□□□□ -0.23
NR4A1-215ENST00000550557 SHPRHQ149N8 1683 aa13.63□□□□□ -0.23
NR4A1-215ENST00000550557 LCORLQ8N3X6 602 aa13.63□□□□□ -0.23
NR4A1-215ENST00000550557 TRAF5O00463 557 aa13.63□□□□□ -0.23
NR4A1-215ENST00000550557 PRDX5P30044 214 aa13.63□□□□□ -0.23
NR4A1-215ENST00000550557 TMEM179Q6ZVK1 233 aa13.63□□□□□ -0.23
NR4A1-215ENST00000550557 TMC6Q7Z403 805 aa13.63□□□□□ -0.23
NR4A1-215ENST00000550557 PNMA8AQ86V59 439 aaPredicted RBP13.63□□□□□ -0.23
NR4A1-215ENST00000550557 HOOK3Q86VS8 718 aa13.63□□□□□ -0.23
NR4A1-215ENST00000550557 ABI1Q8IZP0 508 aa13.63□□□□□ -0.23
NR4A1-215ENST00000550557 KIF2CQ99661 725 aa13.63□□□□□ -0.23
NR4A1-215ENST00000550557 CNTNAP4Q9C0A0 1308 aa13.63□□□□□ -0.23
NR4A1-215ENST00000550557 GOLGA6L7A0A1B0GV03 622 aa13.63□□□□□ -0.23
NR4A1-215ENST00000550557 DDAH1O94760 285 aa13.63□□□□□ -0.23
NR4A1-215ENST00000550557 ZNF157P51786 506 aaPredicted RBP13.63□□□□□ -0.23
NR4A1-215ENST00000550557 SEPT14Q6ZU15 432 aa13.63□□□□□ -0.23
NR4A1-215ENST00000550557 FAM160B2Q86V87 743 aa13.63□□□□□ -0.23
NR4A1-215ENST00000550557 MYRIPQ8NFW9 859 aa13.63□□□□□ -0.23
NR4A1-215ENST00000550557 COMMD10Q9Y6G5 202 aa13.63□□□□□ -0.23
NR4A1-215ENST00000550557 USP17L5A8MUK1 530 aa13.62□□□□□ -0.23
NR4A1-215ENST00000550557 HSP90AA4PQ58FG1 418 aa13.62□□□□□ -0.23
NR4A1-215ENST00000550557 HERC4Q5GLZ8 1057 aaPredicted RBP13.62□□□□□ -0.23
NR4A1-215ENST00000550557 DCAF17Q5H9S7 520 aaPredicted RBP13.62□□□□□ -0.23
NR4A1-215ENST00000550557 EEPD1Q7L9B9 569 aa13.62□□□□□ -0.23
NR4A1-215ENST00000550557 MYCT1Q8N699 235 aa13.62□□□□□ -0.23
NR4A1-215ENST00000550557 CTAGE1Q96RT6 745 aa13.62□□□□□ -0.23
NR4A1-215ENST00000550557 ADPGKQ9BRR6 497 aa13.62□□□□□ -0.23
NR4A1-215ENST00000550557 NACA2Q9H009 215 aa13.62□□□□□ -0.23
NR4A1-215ENST00000550557 PRKAB2O43741 272 aa13.62□□□□□ -0.23
NR4A1-215ENST00000550557 LMNB1P20700 586 aa13.62□□□□□ -0.23
NR4A1-215ENST00000550557 TRIM28Q13263 835 aaKnown RBP13.62□□□□□ -0.23
NR4A1-215ENST00000550557 SNW1Q13573 536 aaKnown RBP13.62□□□□□ -0.23
NR4A1-215ENST00000550557 ZMYM1Q5SVZ6 1142 aa13.62□□□□□ -0.23
NR4A1-215ENST00000550557 CMTR1Q8N1G2 835 aaKnown RBP13.62□□□□□ -0.23
NR4A1-215ENST00000550557 LRRC45Q96CN5 670 aa13.62□□□□□ -0.23
NR4A1-215ENST00000550557 DYNLL2Q96FJ2 89 aa13.62□□□□□ -0.23
NR4A1-215ENST00000550557 HOXC10Q9NYD6 342 aa13.62□□□□□ -0.23
NR4A1-215ENST00000550557 GSTTP1A0A1W2PQM5 241 aa13.62□□□□□ -0.23
NR4A1-215ENST00000550557 ERICH4A6NGS2 130 aa13.62□□□□□ -0.23
NR4A1-215ENST00000550557 PRPF4BQ13523 1007 aaKnown RBP13.62□□□□□ -0.23
NR4A1-215ENST00000550557 STYK1Q6J9G0 422 aa13.62□□□□□ -0.23
NR4A1-215ENST00000550557 LUZP1Q86V48 1076 aa13.62□□□□□ -0.23
NR4A1-215ENST00000550557 COL23A1Q86Y22 540 aaPredicted RBP13.62□□□□□ -0.23
NR4A1-215ENST00000550557 CAMTA2O94983 1202 aa13.61□□□□□ -0.23
NR4A1-215ENST00000550557 EPB41P11171 864 aaKnown RBP13.61□□□□□ -0.23
NR4A1-215ENST00000550557 SKILP12757 684 aa13.61□□□□□ -0.23
NR4A1-215ENST00000550557 SPP2Q13103 211 aa13.61□□□□□ -0.23
NR4A1-215ENST00000550557 XKR9Q5GH70 373 aa13.61□□□□□ -0.23
NR4A1-215ENST00000550557 TMEM106CQ9BVX2 250 aa13.61□□□□□ -0.23
NR4A1-215ENST00000550557 TEKT3Q9BXF9 490 aa13.61□□□□□ -0.23
NR4A1-215ENST00000550557 Q3C1V9 767 aa13.61□□□□□ -0.23
NR4A1-215ENST00000550557 CDC37L1Q7L3B6 337 aa13.61□□□□□ -0.23
NR4A1-215ENST00000550557 BLIDQ8IZY5 108 aa13.61□□□□□ -0.23
NR4A1-215ENST00000550557 RGS22Q8NE09 1264 aa13.61□□□□□ -0.23
NR4A1-215ENST00000550557 TBC1D16Q8TBP0 767 aa13.61□□□□□ -0.23
NR4A1-215ENST00000550557 KIF5CO60282 957 aa13.61□□□□□ -0.23
NR4A1-215ENST00000550557 SLC16A2P36021 539 aa13.61□□□□□ -0.23
NR4A1-215ENST00000550557 TPCN1Q9ULQ1 816 aa13.61□□□□□ -0.23
NR4A1-215ENST00000550557 MTMR6Q9Y217 621 aa13.61□□□□□ -0.23
NR4A1-215ENST00000550557 SIGLEC1Q9BZZ2 1709 aa13.61□□□□□ -0.23
NR4A1-215ENST00000550557 C9orf131Q5VYM1 1079 aa13.61□□□□□ -0.23
NR4A1-215ENST00000550557 FAM173BQ6P4H8 233 aa13.61□□□□□ -0.23
NR4A1-215ENST00000550557 GTF3C6Q969F1 213 aa13.61□□□□□ -0.23
NR4A1-215ENST00000550557 USP42Q9H9J4 1324 aaKnown RBP13.6□□□□□ -0.23
NR4A1-215ENST00000550557 SCG2P13521 617 aa13.6□□□□□ -0.23
NR4A1-215ENST00000550557 HUNKP57058 714 aa13.6□□□□□ -0.23
NR4A1-215ENST00000550557 RAD51AP2Q09MP3 1159 aa13.6□□□□□ -0.23
NR4A1-215ENST00000550557 ADCK5Q3MIX3 580 aa13.6□□□□□ -0.23
NR4A1-215ENST00000550557 ANO1Q5XXA6 986 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms