RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 PLIN4Q96Q06 1357 aa11.63□□□□□ -0.55
HDAC7-229ENST00000549883 FGRP09769 529 aa11.62□□□□□ -0.55
HDAC7-229ENST00000549883 MAPK4P31152 587 aa11.62□□□□□ -0.55
HDAC7-229ENST00000549883 TMEM132BQ14DG7 1078 aa11.62□□□□□ -0.55
HDAC7-229ENST00000549883 PLEKHH3Q7Z736 793 aa11.62□□□□□ -0.55
HDAC7-229ENST00000549883 PXYLP1Q8TE99 480 aa11.62□□□□□ -0.55
HDAC7-229ENST00000549883 GTF3C2Q8WUA4 911 aaPredicted RBP11.62□□□□□ -0.55
HDAC7-229ENST00000549883 RNF208Q9H0X6 261 aa11.62□□□□□ -0.55
HDAC7-229ENST00000549883 GOPCQ9HD26 462 aa11.62□□□□□ -0.55
HDAC7-229ENST00000549883 HOXC10Q9NYD6 342 aa11.62□□□□□ -0.55
HDAC7-229ENST00000549883 FLRT1Q9NZU1 646 aa11.62□□□□□ -0.55
HDAC7-229ENST00000549883 ADAMTS5Q9UNA0 930 aa11.62□□□□□ -0.55
HDAC7-229ENST00000549883 ORC4O43929 436 aa11.61□□□□□ -0.55
HDAC7-229ENST00000549883 RANBP6O60518 1105 aaKnown RBP11.61□□□□□ -0.55
HDAC7-229ENST00000549883 TTLL1O95922 423 aa11.61□□□□□ -0.55
HDAC7-229ENST00000549883 SLC3A2P08195 630 aaKnown RBP11.61□□□□□ -0.55
HDAC7-229ENST00000549883 PTPREP23469 700 aa11.61□□□□□ -0.55
HDAC7-229ENST00000549883 PLS1Q14651 629 aa11.61□□□□□ -0.55
HDAC7-229ENST00000549883 RRP12Q5JTH9 1297 aaKnown RBP11.61□□□□□ -0.55
HDAC7-229ENST00000549883 TICAM2Q86XR7 235 aa11.61□□□□□ -0.55
HDAC7-229ENST00000549883 CCAR1Q8IX12 1150 aaKnown RBP11.61□□□□□ -0.55
HDAC7-229ENST00000549883 REPS2Q8NFH8 660 aa11.61□□□□□ -0.55
HDAC7-229ENST00000549883 NPLOC4Q8TAT6 608 aa11.61□□□□□ -0.55
HDAC7-229ENST00000549883 MKL1Q969V6 931 aa11.61□□□□□ -0.55
HDAC7-229ENST00000549883 NUDT12Q9BQG2 462 aa11.61□□□□□ -0.55
HDAC7-229ENST00000549883 SPATC1LQ9H0A9 340 aa11.61□□□□□ -0.55
HDAC7-229ENST00000549883 ZNF287Q9HBT7 754 aa11.61□□□□□ -0.55
HDAC7-229ENST00000549883 NEDD4P46934 1319 aa11.6□□□□□ -0.55
HDAC7-229ENST00000549883 PLXNA1Q9UIW2 1896 aa11.6□□□□□ -0.55
HDAC7-229ENST00000549883 TSPY2A6NKD2 308 aa11.6□□□□□ -0.55
HDAC7-229ENST00000549883 VWA5AO00534 786 aa11.6□□□□□ -0.55
HDAC7-229ENST00000549883 ERCC3P19447 782 aa11.6□□□□□ -0.55
HDAC7-229ENST00000549883 CHMLP26374 656 aa11.6□□□□□ -0.55
HDAC7-229ENST00000549883 DEFB118Q96PH6 123 aa11.6□□□□□ -0.55
HDAC7-229ENST00000549883 TOMM22Q9NS69 142 aa11.6□□□□□ -0.55
HDAC7-229ENST00000549883 PPP1R9AQ9ULJ8 1098 aa11.6□□□□□ -0.55
HDAC7-229ENST00000549883 MTMR7Q9Y216 660 aa11.6□□□□□ -0.55
HDAC7-229ENST00000549883 ZMYM6O95789 1325 aa11.6□□□□□ -0.55
HDAC7-229ENST00000549883 FRMPD3Q5JV73 1810 aa11.59□□□□□ -0.55
HDAC7-229ENST00000549883 ZNF236Q9UL36 1845 aa11.59□□□□□ -0.55
HDAC7-229ENST00000549883 COBLO75128 1261 aa11.59□□□□□ -0.55
HDAC7-229ENST00000549883 HMGCRP04035 888 aa11.59□□□□□ -0.55
HDAC7-229ENST00000549883 GJB1P08034 283 aa11.59□□□□□ -0.55
HDAC7-229ENST00000549883 SNAP25P60880 206 aa11.59□□□□□ -0.55
HDAC7-229ENST00000549883 UBXN2AP68543 259 aa11.59□□□□□ -0.55
HDAC7-229ENST00000549883 CCNA1P78396 465 aa11.59□□□□□ -0.55
HDAC7-229ENST00000549883 PTH1RQ03431 593 aa11.59□□□□□ -0.55
HDAC7-229ENST00000549883 MAP2K5Q13163 448 aa11.59□□□□□ -0.55
HDAC7-229ENST00000549883 AKNAD1Q5T1N1 836 aa11.59□□□□□ -0.55
HDAC7-229ENST00000549883 SLFN13Q68D06 897 aa11.59□□□□□ -0.55
HDAC7-229ENST00000549883 RCSD1Q6JBY9 416 aa11.59□□□□□ -0.55
HDAC7-229ENST00000549883 NCAPG2Q86XI2 1143 aa11.59□□□□□ -0.55
HDAC7-229ENST00000549883 U2AF1L4Q8WU68 220 aaKnown RBP11.59□□□□□ -0.55
HDAC7-229ENST00000549883 SOCS4Q8WXH5 440 aa11.59□□□□□ -0.55
HDAC7-229ENST00000549883 SLF1Q9BQI6 1058 aa11.59□□□□□ -0.55
HDAC7-229ENST00000549883 ZKSCAN3Q9BRR0 538 aa11.59□□□□□ -0.55
HDAC7-229ENST00000549883 ZNF214Q9UL59 606 aaPredicted RBP11.59□□□□□ -0.55
HDAC7-229ENST00000549883 STX8Q9UNK0 236 aa11.59□□□□□ -0.55
HDAC7-229ENST00000549883 RIPK3Q9Y572 518 aa11.59□□□□□ -0.55
HDAC7-229ENST00000549883 TAF6LQ9Y6J9 622 aa11.59□□□□□ -0.55
HDAC7-229ENST00000549883 SLC15A5A6NIM6 579 aa11.58□□□□□ -0.56
HDAC7-229ENST00000549883 HIP1O00291 1037 aa11.58□□□□□ -0.56
HDAC7-229ENST00000549883 XRCC5P13010 732 aaKnown RBP11.58□□□□□ -0.56
HDAC7-229ENST00000549883 PRKAR2AP13861 404 aaKnown RBP11.58□□□□□ -0.56
HDAC7-229ENST00000549883 TAL1P17542 331 aaPredicted RBP11.58□□□□□ -0.56
HDAC7-229ENST00000549883 MCCP23508 829 aa11.58□□□□□ -0.56
HDAC7-229ENST00000549883 CCND3P30281 292 aaPredicted RBP11.58□□□□□ -0.56
HDAC7-229ENST00000549883 RGS2P41220 211 aa11.58□□□□□ -0.56
HDAC7-229ENST00000549883 GJA8P48165 433 aa11.58□□□□□ -0.56
HDAC7-229ENST00000549883 NOVP48745 357 aa11.58□□□□□ -0.56
HDAC7-229ENST00000549883 CACNB2Q08289 660 aaPredicted RBP11.58□□□□□ -0.56
HDAC7-229ENST00000549883 GRB14Q14449 540 aa11.58□□□□□ -0.56
HDAC7-229ENST00000549883 MAP3K21Q5TCX8 1036 aa11.58□□□□□ -0.56
HDAC7-229ENST00000549883 KCTD1Q719H9 257 aa11.58□□□□□ -0.56
HDAC7-229ENST00000549883 GMCL1P1Q8NEA9 526 aa11.58□□□□□ -0.56
HDAC7-229ENST00000549883 STAG1Q8WVM7 1258 aa11.58□□□□□ -0.56
HDAC7-229ENST00000549883 KIFC2Q96AC6 838 aa11.58□□□□□ -0.56
HDAC7-229ENST00000549883 APBA2Q99767 749 aa11.58□□□□□ -0.56
HDAC7-229ENST00000549883 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.58□□□□□ -0.56
HDAC7-229ENST00000549883 CWC22Q9HCG8 908 aaKnown RBP11.58□□□□□ -0.56
HDAC7-229ENST00000549883 PAK6Q9NQU5 681 aaPredicted RBP11.58□□□□□ -0.56
HDAC7-229ENST00000549883 ALPK3Q96L96 1907 aa11.58□□□□□ -0.56
HDAC7-229ENST00000549883 MCM3APO60318 1980 aa11.58□□□□□ -0.56
HDAC7-229ENST00000549883 SGPL1O95470 568 aa11.57□□□□□ -0.56
HDAC7-229ENST00000549883 IGHA2P01877 340 aa11.57□□□□□ -0.56
HDAC7-229ENST00000549883 BMP3P12645 472 aa11.57□□□□□ -0.56
HDAC7-229ENST00000549883 ZKSCAN1P17029 563 aaPredicted RBP11.57□□□□□ -0.56
HDAC7-229ENST00000549883 ADORA2AP29274 412 aa11.57□□□□□ -0.56
HDAC7-229ENST00000549883 STAT3P40763 770 aa11.57□□□□□ -0.56
HDAC7-229ENST00000549883 SLC4A3P48751 1232 aa11.57□□□□□ -0.56
HDAC7-229ENST00000549883 TTBK2Q6IQ55 1244 aa11.57□□□□□ -0.56
HDAC7-229ENST00000549883 MFSD6Q6ZSS7 791 aa11.57□□□□□ -0.56
HDAC7-229ENST00000549883 UBE2Q1Q7Z7E8 422 aa11.57□□□□□ -0.56
HDAC7-229ENST00000549883 RIOX2Q8IUF8 465 aa11.57□□□□□ -0.56
HDAC7-229ENST00000549883 CPXCR1Q8N123 301 aa11.57□□□□□ -0.56
HDAC7-229ENST00000549883 MB21D1Q8N884 522 aa11.57□□□□□ -0.56
HDAC7-229ENST00000549883 SHCBP1Q8NEM2 672 aa11.57□□□□□ -0.56
HDAC7-229ENST00000549883 TRPV1Q8NER1 839 aa11.57□□□□□ -0.56
HDAC7-229ENST00000549883 TMEM47Q9BQJ4 181 aa11.57□□□□□ -0.56
HDAC7-229ENST00000549883 DSCC1Q9BVC3 393 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms