RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 TPX2Q9ULW0 747 aaKnown RBP6.08□□□□□ -1.44
PTCH1-216ENST00000548379 A0A1W2PQU0 124 aa6.07□□□□□ -1.44
PTCH1-216ENST00000548379 FAM170BA6NMN3 283 aa6.07□□□□□ -1.44
PTCH1-216ENST00000548379 PROCP04070 461 aa6.07□□□□□ -1.44
PTCH1-216ENST00000548379 ZNF445P59923 1031 aa6.07□□□□□ -1.44
PTCH1-216ENST00000548379 CYP27A1Q02318 531 aa6.07□□□□□ -1.44
PTCH1-216ENST00000548379 NFIAQ12857 509 aa6.07□□□□□ -1.44
PTCH1-216ENST00000548379 SNW1Q13573 536 aaKnown RBP6.07□□□□□ -1.44
PTCH1-216ENST00000548379 CYP27C1Q4G0S4 372 aa6.07□□□□□ -1.44
PTCH1-216ENST00000548379 NKAPLQ5M9Q1 402 aa6.07□□□□□ -1.44
PTCH1-216ENST00000548379 ZNF765Q7L2R6 523 aa6.07□□□□□ -1.44
PTCH1-216ENST00000548379 LRRC47Q8N1G4 583 aaKnown RBP6.07□□□□□ -1.44
PTCH1-216ENST00000548379 ARHGEF39Q8N4T4 335 aa6.07□□□□□ -1.44
PTCH1-216ENST00000548379 ZBTB38Q8NAP3 1195 aaPredicted RBP6.07□□□□□ -1.44
PTCH1-216ENST00000548379 PIWIL2Q8TC59 973 aaKnown RBP6.07□□□□□ -1.44
PTCH1-216ENST00000548379 MRGPRX3Q96LB0 322 aa6.07□□□□□ -1.44
PTCH1-216ENST00000548379 MFSD14AQ96MC6 490 aa6.07□□□□□ -1.44
PTCH1-216ENST00000548379 GTF2IRD1Q9UHL9 959 aa6.07□□□□□ -1.44
PTCH1-216ENST00000548379 LEMD3Q9Y2U8 911 aa6.07□□□□□ -1.44
PTCH1-216ENST00000548379 PCDHB12Q9Y5F1 795 aa6.07□□□□□ -1.44
PTCH1-216ENST00000548379 FHOD1Q9Y613 1164 aa6.07□□□□□ -1.44
PTCH1-216ENST00000548379 CAPN6Q9Y6Q1 641 aa6.07□□□□□ -1.44
PTCH1-216ENST00000548379 U3KQE9 123 aa6.07□□□□□ -1.44
PTCH1-216ENST00000548379 ESYT3A0FGR9 886 aa6.06□□□□□ -1.44
PTCH1-216ENST00000548379 PRR33A8MZF0 331 aa6.06□□□□□ -1.44
PTCH1-216ENST00000548379 ITGAVP06756 1048 aa6.06□□□□□ -1.44
PTCH1-216ENST00000548379 FAM153BP0C7A2 387 aa6.06□□□□□ -1.44
PTCH1-216ENST00000548379 SRFP11831 508 aa6.06□□□□□ -1.44
PTCH1-216ENST00000548379 CHMP4BP1P59074 171 aa6.06□□□□□ -1.44
PTCH1-216ENST00000548379 ZC3H12BQ5HYM0 836 aaKnown RBP6.06□□□□□ -1.44
PTCH1-216ENST00000548379 KIAA0907Q7Z7F0 614 aaPredicted RBP6.06□□□□□ -1.44
PTCH1-216ENST00000548379 ZNF227Q86WZ6 799 aa6.06□□□□□ -1.44
PTCH1-216ENST00000548379 SYTL5Q8TDW5 730 aaPredicted RBP6.06□□□□□ -1.44
PTCH1-216ENST00000548379 FGD4Q96M96 766 aa6.06□□□□□ -1.44
PTCH1-216ENST00000548379 GBP3Q9H0R5 595 aa6.06□□□□□ -1.44
PTCH1-216ENST00000548379 MKNK2Q9HBH9 465 aa6.06□□□□□ -1.44
PTCH1-216ENST00000548379 ARHGEF4Q9NR80 690 aa6.06□□□□□ -1.44
PTCH1-216ENST00000548379 EMC9Q9Y3B6 208 aa6.06□□□□□ -1.44
PTCH1-216ENST00000548379 PTCH2Q9Y6C5 1203 aa6.06□□□□□ -1.44
PTCH1-216ENST00000548379 PPM1BO75688 479 aa6.05□□□□□ -1.44
PTCH1-216ENST00000548379 ITGA4P13612 1032 aa6.05□□□□□ -1.44
PTCH1-216ENST00000548379 OXCT1P55809 520 aa6.05□□□□□ -1.44
PTCH1-216ENST00000548379 TNK2Q07912 1038 aa6.05□□□□□ -1.44
PTCH1-216ENST00000548379 CPSF6Q16630 551 aaKnown RBP eCLIP6.05□□□□□ -1.44
PTCH1-216ENST00000548379 RSPO4Q2I0M5 234 aaPredicted RBP6.05□□□□□ -1.44
PTCH1-216ENST00000548379 SV2CQ496J9 727 aa6.05□□□□□ -1.44
PTCH1-216ENST00000548379 ZNF662Q6ZS27 426 aa6.05□□□□□ -1.44
PTCH1-216ENST00000548379 SLC51AQ86UW1 340 aa6.05□□□□□ -1.44
PTCH1-216ENST00000548379 GPR62Q9BZJ7 368 aa6.05□□□□□ -1.44
PTCH1-216ENST00000548379 FANCLQ9NW38 375 aa6.05□□□□□ -1.44
PTCH1-216ENST00000548379 SBNO2Q9Y2G9 1366 aa6.05□□□□□ -1.44
PTCH1-216ENST00000548379 AGRPO00253 132 aa6.04□□□□□ -1.44
PTCH1-216ENST00000548379 GSC2O15499 205 aa6.04□□□□□ -1.44
PTCH1-216ENST00000548379 SIGLEC6O43699 453 aa6.04□□□□□ -1.44
PTCH1-216ENST00000548379 CBX7O95931 251 aa6.04□□□□□ -1.44
PTCH1-216ENST00000548379 IGLV1-40P01703 118 aa6.04□□□□□ -1.44
PTCH1-216ENST00000548379 FSTP19883 344 aa6.04□□□□□ -1.44
PTCH1-216ENST00000548379 PPP2R2AP63151 447 aa6.04□□□□□ -1.44
PTCH1-216ENST00000548379 TMEM67Q5HYA8 995 aa6.04□□□□□ -1.44
PTCH1-216ENST00000548379 FOXB2Q5VYV0 432 aa6.04□□□□□ -1.44
PTCH1-216ENST00000548379 TMC3Q7Z5M5 1100 aa6.04□□□□□ -1.44
PTCH1-216ENST00000548379 HOMER1Q86YM7 354 aa6.04□□□□□ -1.44
PTCH1-216ENST00000548379 TRIM59Q8IWR1 403 aa6.04□□□□□ -1.44
PTCH1-216ENST00000548379 MFSD4AQ8N468 514 aa6.04□□□□□ -1.44
PTCH1-216ENST00000548379 BVESQ8NE79 360 aa6.04□□□□□ -1.44
PTCH1-216ENST00000548379 ZSWIM2Q8NEG5 633 aa6.04□□□□□ -1.44
PTCH1-216ENST00000548379 ENOX1Q8TC92 643 aaKnown RBP6.04□□□□□ -1.44
PTCH1-216ENST00000548379 APPBP2Q92624 585 aa6.04□□□□□ -1.44
PTCH1-216ENST00000548379 KISS1RQ969F8 398 aaPredicted RBP6.04□□□□□ -1.44
PTCH1-216ENST00000548379 SLC26A8Q96RN1 970 aa6.04□□□□□ -1.44
PTCH1-216ENST00000548379 METTL22Q9BUU2 404 aaPredicted RBP6.04□□□□□ -1.44
PTCH1-216ENST00000548379 DUSP15Q9H1R2 295 aaPredicted RBP6.04□□□□□ -1.44
PTCH1-216ENST00000548379 CGGBP1Q9UFW8 167 aaPredicted RBP6.04□□□□□ -1.44
PTCH1-216ENST00000548379 KCNH3Q9ULD8 1083 aa6.04□□□□□ -1.44
PTCH1-216ENST00000548379 DIS3Q9Y2L1 958 aaKnown RBP6.04□□□□□ -1.44
PTCH1-216ENST00000548379 ST14Q9Y5Y6 855 aa6.04□□□□□ -1.44
PTCH1-216ENST00000548379 SHISA3A0PJX4 238 aa6.03□□□□□ -1.44
PTCH1-216ENST00000548379 TBX1O43435 398 aa6.03□□□□□ -1.44
PTCH1-216ENST00000548379 CDC45O75419 566 aa6.03□□□□□ -1.44
PTCH1-216ENST00000548379 FGFR1P11362 822 aa6.03□□□□□ -1.44
PTCH1-216ENST00000548379 NMIQ13287 307 aaPredicted RBP6.03□□□□□ -1.44
PTCH1-216ENST00000548379 GRB10Q13322 594 aa6.03□□□□□ -1.44
PTCH1-216ENST00000548379 DOC2BQ14184 412 aa6.03□□□□□ -1.44
PTCH1-216ENST00000548379 HSP90AA2PQ14568 343 aaPredicted RBP6.03□□□□□ -1.44
PTCH1-216ENST00000548379 NKPD1Q17RQ9 610 aa6.03□□□□□ -1.44
PTCH1-216ENST00000548379 DUSP27Q5VZP5 1158 aa6.03□□□□□ -1.44
PTCH1-216ENST00000548379 C16orf86Q6ZW13 317 aa6.03□□□□□ -1.44
PTCH1-216ENST00000548379 SYNPOQ8N3V7 929 aa6.03□□□□□ -1.44
PTCH1-216ENST00000548379 FBXL6Q8N531 539 aa6.03□□□□□ -1.44
PTCH1-216ENST00000548379 LRRN4CLQ8ND94 238 aa6.03□□□□□ -1.44
PTCH1-216ENST00000548379 SHKBP1Q8TBC3 707 aa6.03□□□□□ -1.44
PTCH1-216ENST00000548379 LGR4Q9BXB1 951 aa6.03□□□□□ -1.44
PTCH1-216ENST00000548379 HDAC8Q9BY41 377 aa6.03□□□□□ -1.44
PTCH1-216ENST00000548379 GFOD1Q9NXC2 390 aa6.03□□□□□ -1.44
PTCH1-216ENST00000548379 FBXL21Q9UKT6 434 aa6.03□□□□□ -1.44
PTCH1-216ENST00000548379 TRAV20A0A0B4J274 112 aa6.02□□□□□ -1.45
PTCH1-216ENST00000548379 CCDC163A0A0D9SF12 145 aa6.02□□□□□ -1.45
PTCH1-216ENST00000548379 PRR19A6NJB7 356 aa6.02□□□□□ -1.45
PTCH1-216ENST00000548379 WDR64B1ANS9 1081 aa6.02□□□□□ -1.45
PTCH1-216ENST00000548379 PRAMEF1O95521 474 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms