RNA–Protein interactions for RNA: ENST00000547148.5

PFKM-208, Transcript of phosphofructokinase, muscle, human

TSL 3

Gene PFKM, Length 775 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-208	ENST00000547148	LPAR1	Q92633	364 aa		13.92	□□□□□ -0.18
PFKM-208	ENST00000547148	TMX3	Q96JJ7	454 aa		13.92	□□□□□ -0.18
PFKM-208	ENST00000547148	HHIPL1	Q96JK4	782 aa		13.92	□□□□□ -0.18
PFKM-208	ENST00000547148	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.92	□□□□□ -0.18
PFKM-208	ENST00000547148	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.92	□□□□□ -0.18
PFKM-208	ENST00000547148	PALM3	A6NDB9	673 aa	Predicted RBP	13.91	□□□□□ -0.18
PFKM-208	ENST00000547148	GOLGA8A	A7E2F4	631 aa		13.91	□□□□□ -0.18
PFKM-208	ENST00000547148	C19orf81	C9J6K1	198 aa		13.91	□□□□□ -0.18
PFKM-208	ENST00000547148		K7ELQ4	463 aa	Predicted RBP	13.91	□□□□□ -0.18
PFKM-208	ENST00000547148	SLC10A3	P09131	477 aa		13.91	□□□□□ -0.18
PFKM-208	ENST00000547148	VCAM1	P19320	739 aa		13.91	□□□□□ -0.18
PFKM-208	ENST00000547148	METAP2	P50579	478 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
PFKM-208	ENST00000547148	HMGCS2	P54868	508 aa		13.91	□□□□□ -0.18
PFKM-208	ENST00000547148	ZNF543	Q08ER8	600 aa		13.91	□□□□□ -0.18
PFKM-208	ENST00000547148	SCRN1	Q12765	414 aa		13.91	□□□□□ -0.18
PFKM-208	ENST00000547148	STK3	Q13188	491 aa		13.91	□□□□□ -0.18
PFKM-208	ENST00000547148	MOGS	Q13724	837 aa		13.91	□□□□□ -0.18
PFKM-208	ENST00000547148	RTN1	Q16799	776 aa		13.91	□□□□□ -0.18
PFKM-208	ENST00000547148	SPRYD7	Q5W111	196 aa		13.91	□□□□□ -0.18
PFKM-208	ENST00000547148	USP17L2	Q6R6M4	530 aa		13.91	□□□□□ -0.18
PFKM-208	ENST00000547148	SYNE3	Q6ZMZ3	975 aa		13.91	□□□□□ -0.18
PFKM-208	ENST00000547148	HSCB	Q8IWL3	235 aa		13.91	□□□□□ -0.18
PFKM-208	ENST00000547148	CCDC144CP	Q8IYA2	1237 aa		13.91	□□□□□ -0.18
PFKM-208	ENST00000547148	NECAB1	Q8N987	351 aa		13.91	□□□□□ -0.18
PFKM-208	ENST00000547148	FANCB	Q8NB91	859 aa		13.91	□□□□□ -0.18
PFKM-208	ENST00000547148	GTF3C6	Q969F1	213 aa		13.91	□□□□□ -0.18
PFKM-208	ENST00000547148	ZSCAN31	Q96LW9	406 aa	Predicted RBP	13.91	□□□□□ -0.18
PFKM-208	ENST00000547148	NUP88	Q99567	741 aa	Predicted RBP	13.91	□□□□□ -0.18
PFKM-208	ENST00000547148	MCOLN1	Q9GZU1	580 aa		13.91	□□□□□ -0.18
PFKM-208	ENST00000547148	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.91	□□□□□ -0.18
PFKM-208	ENST00000547148	MAD2L2	Q9UI95	211 aa		13.91	□□□□□ -0.18
PFKM-208	ENST00000547148	MTMR7	Q9Y216	660 aa		13.91	□□□□□ -0.18
PFKM-208	ENST00000547148	MYH4	Q9Y623	1939 aa		13.91	□□□□□ -0.18
PFKM-208	ENST00000547148	LOC285556	D6RIA3	1793 aa		13.91	□□□□□ -0.18
PFKM-208	ENST00000547148	FAM155A	B1AL88	458 aa	Predicted RBP	13.9	□□□□□ -0.18
PFKM-208	ENST00000547148	WDR46	O15213	610 aa	Known RBP	13.9	□□□□□ -0.18
PFKM-208	ENST00000547148	PARP1	P09874	1014 aa	Known RBP	13.9	□□□□□ -0.18
PFKM-208	ENST00000547148	CDC27	P30260	824 aa		13.9	□□□□□ -0.18
PFKM-208	ENST00000547148	ZNF157	P51786	506 aa	Predicted RBP	13.9	□□□□□ -0.18
PFKM-208	ENST00000547148	CCT2	P78371	535 aa	Known RBP	13.9	□□□□□ -0.18
PFKM-208	ENST00000547148	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.9	□□□□□ -0.18
PFKM-208	ENST00000547148	STAG2	Q8N3U4	1231 aa		13.9	□□□□□ -0.18
PFKM-208	ENST00000547148	CHMP4C	Q96CF2	233 aa		13.9	□□□□□ -0.18
PFKM-208	ENST00000547148	MS4A4A	Q96JQ5	239 aa		13.9	□□□□□ -0.18
PFKM-208	ENST00000547148	SLK	Q9H2G2	1235 aa	Predicted RBP	13.9	□□□□□ -0.18
PFKM-208	ENST00000547148	NCOA5	Q9HCD5	579 aa	Known RBP	13.9	□□□□□ -0.18
PFKM-208	ENST00000547148	PDE4DIP	Q5VU43	2346 aa		13.9	□□□□□ -0.18
PFKM-208	ENST00000547148	FRMPD2	Q68DX3	1309 aa	Predicted RBP	13.9	□□□□□ -0.19
PFKM-208	ENST00000547148	RAD21	O60216	631 aa		13.89	□□□□□ -0.19
PFKM-208	ENST00000547148	GOLGA8H	P0CJ92	632 aa		13.89	□□□□□ -0.19
PFKM-208	ENST00000547148	BMP3	P12645	472 aa		13.89	□□□□□ -0.19
PFKM-208	ENST00000547148	KIF5B	P33176	963 aa		13.89	□□□□□ -0.19
PFKM-208	ENST00000547148	ANP32A	P39687	249 aa	Known RBP	13.89	□□□□□ -0.19
PFKM-208	ENST00000547148	SLC1A4	P43007	532 aa		13.89	□□□□□ -0.19
PFKM-208	ENST00000547148	MKRN3	Q13064	507 aa	Known RBP	13.89	□□□□□ -0.19
PFKM-208	ENST00000547148	SNAPC2	Q13487	334 aa		13.89	□□□□□ -0.19
PFKM-208	ENST00000547148	CCDC96	Q2M329	555 aa		13.89	□□□□□ -0.19
PFKM-208	ENST00000547148	SLC35G1	Q2M3R5	365 aa		13.89	□□□□□ -0.19
PFKM-208	ENST00000547148	ASPRV1	Q53RT3	343 aa		13.89	□□□□□ -0.19
PFKM-208	ENST00000547148	FAM83B	Q5T0W9	1011 aa		13.89	□□□□□ -0.19
PFKM-208	ENST00000547148	TMTC3	Q6ZXV5	915 aa		13.89	□□□□□ -0.19
PFKM-208	ENST00000547148	KCTD1	Q719H9	257 aa		13.89	□□□□□ -0.19
PFKM-208	ENST00000547148	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.89	□□□□□ -0.19
PFKM-208	ENST00000547148	CTCFL	Q8NI51	663 aa	Predicted RBP	13.89	□□□□□ -0.19
PFKM-208	ENST00000547148	RBM28	Q9NW13	759 aa	Known RBP	13.89	□□□□□ -0.19
PFKM-208	ENST00000547148	TMOD4	Q9NZQ9	345 aa		13.89	□□□□□ -0.19
PFKM-208	ENST00000547148	PTPRF	P10586	1907 aa		13.89	□□□□□ -0.19
PFKM-208	ENST00000547148	PLEKHA8P1	O95397	391 aa		13.88	□□□□□ -0.19
PFKM-208	ENST00000547148	ADD1	P35611	737 aa	Known RBP	13.88	□□□□□ -0.19
PFKM-208	ENST00000547148	GTF2A2	P52657	109 aa		13.88	□□□□□ -0.19
PFKM-208	ENST00000547148	FUT2	Q10981	343 aa		13.88	□□□□□ -0.19
PFKM-208	ENST00000547148	PPP2R5B	Q15173	497 aa		13.88	□□□□□ -0.19
PFKM-208	ENST00000547148	NTRK3	Q16288	839 aa		13.88	□□□□□ -0.19
PFKM-208	ENST00000547148	TREML2	Q5T2D2	321 aa		13.88	□□□□□ -0.19
PFKM-208	ENST00000547148	GPATCH4	Q5T3I0	446 aa	Known RBP	13.88	□□□□□ -0.19
PFKM-208	ENST00000547148	CCDC83	Q8IWF9	413 aa		13.88	□□□□□ -0.19
PFKM-208	ENST00000547148	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.88	□□□□□ -0.19
PFKM-208	ENST00000547148	CCDC196	A0A1B0GTZ2	297 aa		13.87	□□□□□ -0.19
PFKM-208	ENST00000547148	CTDNEP1	O95476	244 aa		13.87	□□□□□ -0.19
PFKM-208	ENST00000547148	GRM1	Q13255	1194 aa		13.87	□□□□□ -0.19
PFKM-208	ENST00000547148	CUL4A	Q13619	759 aa		13.87	□□□□□ -0.19
PFKM-208	ENST00000547148	PRPF38B	Q5VTL8	546 aa	Known RBP	13.87	□□□□□ -0.19
PFKM-208	ENST00000547148	TTBK2	Q6IQ55	1244 aa		13.87	□□□□□ -0.19
PFKM-208	ENST00000547148	GPAT2	Q6NUI2	795 aa		13.87	□□□□□ -0.19
PFKM-208	ENST00000547148	BTNL9	Q6UXG8	535 aa		13.87	□□□□□ -0.19
PFKM-208	ENST00000547148	NBPF11	Q86T75	865 aa		13.87	□□□□□ -0.19
PFKM-208	ENST00000547148	CMTR1	Q8N1G2	835 aa	Known RBP	13.87	□□□□□ -0.19
PFKM-208	ENST00000547148	SRBD1	Q8N5C6	995 aa	Known RBP	13.87	□□□□□ -0.19
PFKM-208	ENST00000547148	BRI3BP	Q8WY22	251 aa		13.87	□□□□□ -0.19
PFKM-208	ENST00000547148	CCDC102A	Q96A19	550 aa		13.87	□□□□□ -0.19
PFKM-208	ENST00000547148	CAPNS2	Q96L46	248 aa		13.87	□□□□□ -0.19
PFKM-208	ENST00000547148	CPVL	Q9H3G5	476 aa		13.87	□□□□□ -0.19
PFKM-208	ENST00000547148	GPCPD1	Q9NPB8	672 aa		13.87	□□□□□ -0.19
PFKM-208	ENST00000547148	AGTPBP1	Q9UPW5	1226 aa		13.87	□□□□□ -0.19
PFKM-208	ENST00000547148	CNTNAP5	Q8WYK1	1306 aa		13.87	□□□□□ -0.19
PFKM-208	ENST00000547148	CCL15-CCL14	A0A0B4J2E2	113 aa		13.86	□□□□□ -0.19
PFKM-208	ENST00000547148	TESPA1	A2RU30	521 aa	Predicted RBP	13.86	□□□□□ -0.19
PFKM-208	ENST00000547148	TMEM232	C9JQI7	657 aa		13.86	□□□□□ -0.19
PFKM-208	ENST00000547148	KLRF2	D3W0D1	207 aa		13.86	□□□□□ -0.19
PFKM-208	ENST00000547148	CYTH3	O43739	400 aa		13.86	□□□□□ -0.19

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