RNA–Protein interactions for RNA: ENST00000546146.5

LDHC-210, Transcript of lactate dehydrogenase C, humanhuman

TSL 5 BASIC

Gene LDHC, Length 701 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-210ENST00000546146 MTMR7Q9Y216 660 aa11.93□□□□□ -0.5
LDHC-210ENST00000546146 CDK5RAP2Q96SN8 1893 aa11.93□□□□□ -0.5
LDHC-210ENST00000546146 ATRNL1Q5VV63 1379 aa11.92□□□□□ -0.5
LDHC-210ENST00000546146 PALM3A6NDB9 673 aaPredicted RBP11.92□□□□□ -0.5
LDHC-210ENST00000546146 KLRF2D3W0D1 207 aa11.92□□□□□ -0.5
LDHC-210ENST00000546146 FZD9O00144 591 aa11.92□□□□□ -0.5
LDHC-210ENST00000546146 MMP1P03956 469 aa11.92□□□□□ -0.5
LDHC-210ENST00000546146 SCG2P13521 617 aa11.92□□□□□ -0.5
LDHC-210ENST00000546146 CALML3P27482 149 aa11.92□□□□□ -0.5
LDHC-210ENST00000546146 KRT2P35908 639 aa11.92□□□□□ -0.5
LDHC-210ENST00000546146 NOVP48745 357 aa11.92□□□□□ -0.5
LDHC-210ENST00000546146 ZNF280AP59817 542 aaPredicted RBP11.92□□□□□ -0.5
LDHC-210ENST00000546146 ATP2B2Q01814 1243 aa11.92□□□□□ -0.5
LDHC-210ENST00000546146 RASSF7Q02833 373 aa11.92□□□□□ -0.5
LDHC-210ENST00000546146 STK38Q15208 465 aa11.92□□□□□ -0.5
LDHC-210ENST00000546146 ABCB5Q2M3G0 1257 aa11.92□□□□□ -0.5
LDHC-210ENST00000546146 TATDN1Q6P1N9 297 aa11.92□□□□□ -0.5
LDHC-210ENST00000546146 TMEM179Q6ZVK1 233 aa11.92□□□□□ -0.5
LDHC-210ENST00000546146 FAM177A1Q8N128 213 aaPredicted RBP11.92□□□□□ -0.5
LDHC-210ENST00000546146 KCNG4Q8TDN1 519 aa11.92□□□□□ -0.5
LDHC-210ENST00000546146 AIFM3Q96NN9 605 aa11.92□□□□□ -0.5
LDHC-210ENST00000546146 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.92□□□□□ -0.5
LDHC-210ENST00000546146 SH3GLB2Q9NR46 395 aa11.92□□□□□ -0.5
LDHC-210ENST00000546146 RTEL1Q9NZ71 1219 aa11.92□□□□□ -0.5
LDHC-210ENST00000546146 SEC63Q9UGP8 760 aaKnown RBP11.92□□□□□ -0.5
LDHC-210ENST00000546146 RCOR1Q9UKL0 485 aa11.92□□□□□ -0.5
LDHC-210ENST00000546146 STK24Q9Y6E0 443 aa11.92□□□□□ -0.5
LDHC-210ENST00000546146 PSME4Q14997 1843 aa11.92□□□□□ -0.5
LDHC-210ENST00000546146 DDX60LQ5H9U9 1706 aaKnown RBP11.91□□□□□ -0.5
LDHC-210ENST00000546146 FER1L6Q2WGJ9 1857 aa11.91□□□□□ -0.5
LDHC-210ENST00000546146 ECM29Q5VYK3 1845 aa11.91□□□□□ -0.5
LDHC-210ENST00000546146 IGKV6D-41A0A0C4DH26 115 aa11.91□□□□□ -0.5
LDHC-210ENST00000546146 YEATS4O95619 227 aa11.91□□□□□ -0.5
LDHC-210ENST00000546146 LMNB1P20700 586 aa11.91□□□□□ -0.5
LDHC-210ENST00000546146 U2AF2P26368 475 aaKnown RBP eCLIP11.91□□□□□ -0.5
LDHC-210ENST00000546146 NLRP5P59047 1200 aa11.91□□□□□ -0.5
LDHC-210ENST00000546146 CEBPZQ03701 1054 aaKnown RBP11.91□□□□□ -0.5
LDHC-210ENST00000546146 FUT2Q10981 343 aa11.91□□□□□ -0.5
LDHC-210ENST00000546146 PFKFB3Q16875 520 aaPredicted RBP11.91□□□□□ -0.5
LDHC-210ENST00000546146 TPRNQ4KMQ1 711 aa11.91□□□□□ -0.5
LDHC-210ENST00000546146 L1TD1Q5T7N2 865 aaKnown RBP11.91□□□□□ -0.5
LDHC-210ENST00000546146 MYSM1Q5VVJ2 828 aa11.91□□□□□ -0.5
LDHC-210ENST00000546146 SH3BP5LQ7L8J4 393 aa11.91□□□□□ -0.5
LDHC-210ENST00000546146 METTL16Q86W50 562 aaKnown RBP11.91□□□□□ -0.5
LDHC-210ENST00000546146 DIS3L2Q8IYB7 885 aaKnown RBP11.91□□□□□ -0.5
LDHC-210ENST00000546146 JMYQ8N9B5 988 aa11.91□□□□□ -0.5
LDHC-210ENST00000546146 GPT2Q8TD30 523 aa11.91□□□□□ -0.5
LDHC-210ENST00000546146 CCDC12Q8WUD4 166 aaPredicted RBP11.91□□□□□ -0.5
LDHC-210ENST00000546146 HOOK2Q96ED9 719 aa11.91□□□□□ -0.5
LDHC-210ENST00000546146 RRP36Q96EU6 259 aaKnown RBP11.91□□□□□ -0.5
LDHC-210ENST00000546146 FHDC1Q9C0D6 1143 aaPredicted RBP11.91□□□□□ -0.5
LDHC-210ENST00000546146 NYAP2Q9P242 653 aa11.91□□□□□ -0.5
LDHC-210ENST00000546146 MAD2L2Q9UI95 211 aa11.91□□□□□ -0.5
LDHC-210ENST00000546146 CNOT7Q9UIV1 285 aaKnown RBP11.91□□□□□ -0.5
LDHC-210ENST00000546146 CNTNAP5Q8WYK1 1306 aa11.9□□□□□ -0.5
LDHC-210ENST00000546146 GOLGA6L3A6NEY3 463 aa11.9□□□□□ -0.5
LDHC-210ENST00000546146 GADD45BO75293 160 aaPredicted RBP11.9□□□□□ -0.5
LDHC-210ENST00000546146 GUCY1A2P33402 732 aa11.9□□□□□ -0.5
LDHC-210ENST00000546146 ME1P48163 572 aa11.9□□□□□ -0.5
LDHC-210ENST00000546146 GMPSP49915 693 aaPredicted RBP11.9□□□□□ -0.5
LDHC-210ENST00000546146 RILPL1Q5EBL4 403 aa11.9□□□□□ -0.5
LDHC-210ENST00000546146 GPATCH4Q5T3I0 446 aaKnown RBP11.9□□□□□ -0.5
LDHC-210ENST00000546146 GALNT17Q6IS24 598 aa11.9□□□□□ -0.5
LDHC-210ENST00000546146 TMEM92Q6UXU6 159 aa11.9□□□□□ -0.5
LDHC-210ENST00000546146 NOSTRINQ8IVI9 506 aa11.9□□□□□ -0.5
LDHC-210ENST00000546146 CCDC148Q8NFR7 591 aa11.9□□□□□ -0.5
LDHC-210ENST00000546146 BICD2Q8TD16 824 aa11.9□□□□□ -0.5
LDHC-210ENST00000546146 MS4A4AQ96JQ5 239 aa11.9□□□□□ -0.5
LDHC-210ENST00000546146 SPZ1Q9BXG8 430 aa11.9□□□□□ -0.5
LDHC-210ENST00000546146 GJB4Q9NTQ9 266 aa11.9□□□□□ -0.5
LDHC-210ENST00000546146 POLR3EQ9NVU0 708 aa11.9□□□□□ -0.5
LDHC-210ENST00000546146 NOL7Q9UMY1 257 aaKnown RBP11.9□□□□□ -0.5
LDHC-210ENST00000546146 KCNJ14Q9UNX9 436 aa11.9□□□□□ -0.5
LDHC-210ENST00000546146 CEP131Q9UPN4 1083 aa11.9□□□□□ -0.5
LDHC-210ENST00000546146 BRCA1P38398 1863 aaKnown RBP11.89□□□□□ -0.51
LDHC-210ENST00000546146 BTBD18B2RXH4 712 aa11.89□□□□□ -0.51
LDHC-210ENST00000546146 WNT10BO00744 389 aa11.89□□□□□ -0.51
LDHC-210ENST00000546146 TBC1D12O60347 775 aa11.89□□□□□ -0.51
LDHC-210ENST00000546146 PKN1Q16512 942 aa11.89□□□□□ -0.51
LDHC-210ENST00000546146 CCDC96Q2M329 555 aa11.89□□□□□ -0.51
LDHC-210ENST00000546146 CCDC183Q5T5S1 534 aa11.89□□□□□ -0.51
LDHC-210ENST00000546146 ANO1Q5XXA6 986 aa11.89□□□□□ -0.51
LDHC-210ENST00000546146 USP17L2Q6R6M4 530 aa11.89□□□□□ -0.51
LDHC-210ENST00000546146 LRRC47Q8N1G4 583 aaKnown RBP11.89□□□□□ -0.51
LDHC-210ENST00000546146 STAG2Q8N3U4 1231 aa11.89□□□□□ -0.51
LDHC-210ENST00000546146 PIBF1Q8WXW3 757 aa11.89□□□□□ -0.51
LDHC-210ENST00000546146 MKL1Q969V6 931 aa11.89□□□□□ -0.51
LDHC-210ENST00000546146 ZBED3Q96IU2 234 aaPredicted RBP11.89□□□□□ -0.51
LDHC-210ENST00000546146 USP28Q96RU2 1077 aa11.89□□□□□ -0.51
LDHC-210ENST00000546146 PHF20Q9BVI0 1012 aa11.89□□□□□ -0.51
LDHC-210ENST00000546146 ARHGEF10LQ9HCE6 1279 aa11.89□□□□□ -0.51
LDHC-210ENST00000546146 VPS54Q9P1Q0 977 aa11.89□□□□□ -0.51
LDHC-210ENST00000546146 SYNPO2Q9UMS6 1093 aa11.89□□□□□ -0.51
LDHC-210ENST00000546146 ADAMTSL1Q8N6G6 1762 aa11.89□□□□□ -0.51
LDHC-210ENST00000546146 COL4A5P29400 1685 aa11.88□□□□□ -0.51
LDHC-210ENST00000546146 hCG_1642624A0A1W2PR95 340 aa11.88□□□□□ -0.51
LDHC-210ENST00000546146 USP17L5A8MUK1 530 aa11.88□□□□□ -0.51
LDHC-210ENST00000546146 hCG_1984214I3L0E3 225 aa11.88□□□□□ -0.51
LDHC-210ENST00000546146 SPTLC2O15270 562 aa11.88□□□□□ -0.51
LDHC-210ENST00000546146 RAD21O60216 631 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms