RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 PRIMPOLQ96LW4 560 aa4.28□□□□□ -1.72
BRCA2-206ENST00000544455 CCDC194A0A1B0GVG4 234 aa4.28□□□□□ -1.72
BRCA2-206ENST00000544455 KLRF2D3W0D1 207 aa4.28□□□□□ -1.72
BRCA2-206ENST00000544455 TULP1O00294 542 aaPredicted RBP4.28□□□□□ -1.72
BRCA2-206ENST00000544455 CASP14P31944 242 aa4.28□□□□□ -1.72
BRCA2-206ENST00000544455 ELF2Q15723 593 aa4.28□□□□□ -1.72
BRCA2-206ENST00000544455 CERS5Q8N5B7 392 aa4.28□□□□□ -1.72
BRCA2-206ENST00000544455 MTRQ99707 1265 aa4.28□□□□□ -1.72
BRCA2-206ENST00000544455 IRS2Q9Y4H2 1338 aa4.28□□□□□ -1.72
BRCA2-206ENST00000544455 CACNB1Q02641 598 aaPredicted RBP4.28□□□□□ -1.72
BRCA2-206ENST00000544455 TXNRD1Q16881 649 aa4.28□□□□□ -1.72
BRCA2-206ENST00000544455 TIGD1Q96MW7 591 aa4.28□□□□□ -1.72
BRCA2-206ENST00000544455 PDCL3Q9H2J4 239 aa4.28□□□□□ -1.72
BRCA2-206ENST00000544455 RBM28Q9NW13 759 aaKnown RBP4.28□□□□□ -1.72
BRCA2-206ENST00000544455 PCDHA4Q9UN74 947 aa4.28□□□□□ -1.72
BRCA2-206ENST00000544455 RRP9O43818 475 aaKnown RBP4.28□□□□□ -1.72
BRCA2-206ENST00000544455 RHBDL3P58872 404 aa4.28□□□□□ -1.72
BRCA2-206ENST00000544455 RBM6P78332 1123 aaKnown RBP4.28□□□□□ -1.72
BRCA2-206ENST00000544455 PFKFB3Q16875 520 aaPredicted RBP4.28□□□□□ -1.72
BRCA2-206ENST00000544455 AMOTL1Q8IY63 956 aa4.28□□□□□ -1.72
BRCA2-206ENST00000544455 RBM17Q96I25 401 aaKnown RBP4.28□□□□□ -1.72
BRCA2-206ENST00000544455 DDAH1O94760 285 aa4.28□□□□□ -1.72
BRCA2-206ENST00000544455 TECP42680 631 aa4.28□□□□□ -1.72
BRCA2-206ENST00000544455 NAPAP54920 295 aa4.28□□□□□ -1.72
BRCA2-206ENST00000544455 RC3H1Q5TC82 1133 aaKnown RBP4.28□□□□□ -1.72
BRCA2-206ENST00000544455 COL23A1Q86Y22 540 aaPredicted RBP4.28□□□□□ -1.72
BRCA2-206ENST00000544455 NUP88Q99567 741 aaPredicted RBP4.28□□□□□ -1.72
BRCA2-206ENST00000544455 HINFPQ9BQA5 517 aa4.28□□□□□ -1.72
BRCA2-206ENST00000544455 PPEF1O14829 653 aaPredicted RBP4.28□□□□□ -1.72
BRCA2-206ENST00000544455 CHRNA5P30532 468 aa4.28□□□□□ -1.72
BRCA2-206ENST00000544455 MORC3Q14149 939 aa4.28□□□□□ -1.72
BRCA2-206ENST00000544455 PDCL2Q8N4E4 241 aa4.28□□□□□ -1.72
BRCA2-206ENST00000544455 LZTFL1Q9NQ48 299 aa4.28□□□□□ -1.72
BRCA2-206ENST00000544455 POLRMTO00411 1230 aaKnown RBP4.28□□□□□ -1.73
BRCA2-206ENST00000544455 CEP131Q9UPN4 1083 aa4.28□□□□□ -1.73
BRCA2-206ENST00000544455 DAGLAQ9Y4D2 1042 aa4.28□□□□□ -1.73
BRCA2-206ENST00000544455 SYNRGQ9UMZ2 1314 aa4.27□□□□□ -1.73
BRCA2-206ENST00000544455 RNF225M0QZC1 329 aaPredicted RBP4.27□□□□□ -1.73
BRCA2-206ENST00000544455 URI1O94763 535 aaPredicted RBP4.27□□□□□ -1.73
BRCA2-206ENST00000544455 POTEDQ86YR6 584 aa4.27□□□□□ -1.73
BRCA2-206ENST00000544455 VSTM4Q8IW00 320 aa4.27□□□□□ -1.73
BRCA2-206ENST00000544455 MKRN1Q9UHC7 482 aaKnown RBP4.27□□□□□ -1.73
BRCA2-206ENST00000544455 TTF2Q9UNY4 1162 aaKnown RBP4.27□□□□□ -1.73
BRCA2-206ENST00000544455 IKBKBO14920 756 aa4.27□□□□□ -1.73
BRCA2-206ENST00000544455 APBA3O96018 575 aa4.27□□□□□ -1.73
BRCA2-206ENST00000544455 FCER1AP12319 257 aa4.27□□□□□ -1.73
BRCA2-206ENST00000544455 TRMT1LQ7Z2T5 733 aaKnown RBP4.27□□□□□ -1.73
BRCA2-206ENST00000544455 TBCKQ8TEA7 893 aa4.27□□□□□ -1.73
BRCA2-206ENST00000544455 SMCO2A6NFE2 343 aa4.27□□□□□ -1.73
BRCA2-206ENST00000544455 TERF1P54274 439 aa4.27□□□□□ -1.73
BRCA2-206ENST00000544455 UBXN2AP68543 259 aa4.27□□□□□ -1.73
BRCA2-206ENST00000544455 KCTD19Q17RG1 926 aaPredicted RBP4.27□□□□□ -1.73
BRCA2-206ENST00000544455 ERCC6LQ2NKX8 1250 aa4.27□□□□□ -1.73
BRCA2-206ENST00000544455 ZSCAN29Q8IWY8 852 aaPredicted RBP4.27□□□□□ -1.73
BRCA2-206ENST00000544455 PLCH1Q4KWH8 1693 aa4.27□□□□□ -1.73
BRCA2-206ENST00000544455 PHLPP1O60346 1717 aa4.27□□□□□ -1.73
BRCA2-206ENST00000544455 KLK7P49862 253 aa4.27□□□□□ -1.73
BRCA2-206ENST00000544455 REXO1L1PQ8IX06 675 aa4.27□□□□□ -1.73
BRCA2-206ENST00000544455 TC2NQ8N9U0 490 aa4.27□□□□□ -1.73
BRCA2-206ENST00000544455 TRIM10Q9UDY6 481 aa4.27□□□□□ -1.73
BRCA2-206ENST00000544455 PPP2R2CQ9Y2T4 447 aa4.27□□□□□ -1.73
BRCA2-206ENST00000544455 PPP1R3GB7ZBB8 358 aa4.27□□□□□ -1.73
BRCA2-206ENST00000544455 SEC31AO94979 1220 aaKnown RBP4.27□□□□□ -1.73
BRCA2-206ENST00000544455 SARSP49591 514 aaKnown RBP4.27□□□□□ -1.73
BRCA2-206ENST00000544455 NFIAQ12857 509 aa4.27□□□□□ -1.73
BRCA2-206ENST00000544455 ACRBPQ8NEB7 543 aa4.27□□□□□ -1.73
BRCA2-206ENST00000544455 BCAS3Q9H6U6 928 aa4.27□□□□□ -1.73
BRCA2-206ENST00000544455 FGRP09769 529 aa4.27□□□□□ -1.73
BRCA2-206ENST00000544455 STAT6P42226 847 aa4.27□□□□□ -1.73
BRCA2-206ENST00000544455 NYAP1Q6ZVC0 841 aa4.27□□□□□ -1.73
BRCA2-206ENST00000544455 PDGFDQ9GZP0 370 aaPredicted RBP4.27□□□□□ -1.73
BRCA2-206ENST00000544455 BAG3O95817 575 aa4.27□□□□□ -1.73
BRCA2-206ENST00000544455 SLFN14P0C7P3 912 aa4.27□□□□□ -1.73
BRCA2-206ENST00000544455 TICAM2Q86XR7 235 aa4.27□□□□□ -1.73
BRCA2-206ENST00000544455 ST7Q9NRC1 585 aa4.27□□□□□ -1.73
BRCA2-206ENST00000544455 USP40Q9NVE5 1235 aa4.27□□□□□ -1.73
BRCA2-206ENST00000544455 PARP1P09874 1014 aaKnown RBP4.27□□□□□ -1.73
BRCA2-206ENST00000544455 PRCPP42785 496 aa4.27□□□□□ -1.73
BRCA2-206ENST00000544455 TBC1D7Q9P0N9 293 aa4.27□□□□□ -1.73
BRCA2-206ENST00000544455 STXBP3O00186 592 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 SLC37A4O43826 429 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 TDP2O95551 362 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 BAG1Q99933 345 aaPredicted RBP4.26□□□□□ -1.73
BRCA2-206ENST00000544455 MRPL44Q9H9J2 332 aaKnown RBP4.26□□□□□ -1.73
BRCA2-206ENST00000544455 ORC4O43929 436 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 CALM1P0DP23 149 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 CALM2P0DP24 149 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 CALM3P0DP25 149 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 AKR1B1P15121 316 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 LRRC41Q15345 812 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 WDR66Q8TBY9 1149 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 WDR24Q96S15 920 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 NUDT12Q9BQG2 462 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 EP400Q96L91 3159 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 DUOX1Q9NRD9 1551 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 POTEMA6NI47 508 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 USP17L15C9J2P7 530 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 USP17L13C9JLJ4 530 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 USP17L11C9JVI0 530 aa4.26□□□□□ -1.73
BRCA2-206ENST00000544455 USP17L18D6R9N7 530 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms