RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 ATG4CQ96DT6 458 aa14.25□□□□□ -0.13
PTPN6-219ENST00000542848 PUS7LQ9H0K6 701 aaKnown RBP14.25□□□□□ -0.13
PTPN6-219ENST00000542848 MCM3APO60318 1980 aa14.24□□□□□ -0.13
PTPN6-219ENST00000542848 SMIM22K7EJ46 135 aa14.24□□□□□ -0.13
PTPN6-219ENST00000542848 CHGBP05060 677 aa14.24□□□□□ -0.13
PTPN6-219ENST00000542848 FCER1AP12319 257 aa14.24□□□□□ -0.13
PTPN6-219ENST00000542848 MDM2Q00987 491 aaPredicted RBP14.24□□□□□ -0.13
PTPN6-219ENST00000542848 TMEM132BQ14DG7 1078 aa14.24□□□□□ -0.13
PTPN6-219ENST00000542848 DEFB123Q8N688 67 aa14.24□□□□□ -0.13
PTPN6-219ENST00000542848 SLC17A8Q8NDX2 589 aa14.24□□□□□ -0.13
PTPN6-219ENST00000542848 GOPCQ9HD26 462 aa14.24□□□□□ -0.13
PTPN6-219ENST00000542848 SBK1Q52WX2 424 aa14.23□□□□□ -0.13
PTPN6-219ENST00000542848 GJC2Q5T442 439 aaPredicted RBP14.23□□□□□ -0.13
PTPN6-219ENST00000542848 RIOX2Q8IUF8 465 aa14.23□□□□□ -0.13
PTPN6-219ENST00000542848 MAML3Q96JK9 1138 aa14.23□□□□□ -0.13
PTPN6-219ENST00000542848 STRBPQ96SI9 672 aaKnown RBP14.23□□□□□ -0.13
PTPN6-219ENST00000542848 LBHD1Q9BQE6 289 aaPredicted RBP14.23□□□□□ -0.13
PTPN6-219ENST00000542848 ECHDC1Q9NTX5 307 aa14.23□□□□□ -0.13
PTPN6-219ENST00000542848 ARPP21Q9UBL0 812 aaPredicted RBP14.23□□□□□ -0.13
PTPN6-219ENST00000542848 NRBP1Q9UHY1 535 aa14.23□□□□□ -0.13
PTPN6-219ENST00000542848 KBTBD13C9JR72 458 aa14.22□□□□□ -0.13
PTPN6-219ENST00000542848 SMARCA5O60264 1052 aaPredicted RBP14.22□□□□□ -0.13
PTPN6-219ENST00000542848 STAT3P40763 770 aa14.22□□□□□ -0.13
PTPN6-219ENST00000542848 ATN1P54259 1190 aaPredicted RBP14.22□□□□□ -0.13
PTPN6-219ENST00000542848 RTP1P59025 263 aa14.22□□□□□ -0.13
PTPN6-219ENST00000542848 PRAMEF19Q5SWL8 479 aa14.22□□□□□ -0.13
PTPN6-219ENST00000542848 GIMAP6Q6P9H5 292 aa14.22□□□□□ -0.13
PTPN6-219ENST00000542848 SAMD1Q6SPF0 538 aaPredicted RBP14.22□□□□□ -0.13
PTPN6-219ENST00000542848 SLC39A5Q6ZMH5 540 aa14.22□□□□□ -0.13
PTPN6-219ENST00000542848 PRKAG2Q9UGJ0 569 aa14.22□□□□□ -0.13
PTPN6-219ENST00000542848 DIS3Q9Y2L1 958 aaKnown RBP14.22□□□□□ -0.13
PTPN6-219ENST00000542848 VWA5AO00534 786 aa14.21□□□□□ -0.13
PTPN6-219ENST00000542848 COPB2P35606 906 aa14.21□□□□□ -0.13
PTPN6-219ENST00000542848 C20orf194Q5TEA3 1177 aa14.21□□□□□ -0.13
PTPN6-219ENST00000542848 ANO1Q5XXA6 986 aa14.21□□□□□ -0.13
PTPN6-219ENST00000542848 KBTBD3Q8NAB2 608 aa14.21□□□□□ -0.13
PTPN6-219ENST00000542848 MMP19Q99542 508 aa14.21□□□□□ -0.13
PTPN6-219ENST00000542848 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.21□□□□□ -0.13
PTPN6-219ENST00000542848 DCTPP1Q9H773 170 aa14.21□□□□□ -0.13
PTPN6-219ENST00000542848 FBXO28Q9NVF7 368 aa14.21□□□□□ -0.13
PTPN6-219ENST00000542848 MTMR10Q9NXD2 777 aa14.21□□□□□ -0.13
PTPN6-219ENST00000542848 PPP1R9AQ9ULJ8 1098 aa14.21□□□□□ -0.13
PTPN6-219ENST00000542848 GSG1L2A8MUP6 293 aa14.2□□□□□ -0.14
PTPN6-219ENST00000542848 KCTD2Q14681 263 aa14.2□□□□□ -0.14
PTPN6-219ENST00000542848 SNX17Q15036 470 aa14.2□□□□□ -0.14
PTPN6-219ENST00000542848 LRRC41Q15345 812 aa14.2□□□□□ -0.14
PTPN6-219ENST00000542848 ZNF792Q3KQV3 632 aa14.2□□□□□ -0.14
PTPN6-219ENST00000542848 FAM83BQ5T0W9 1011 aa14.2□□□□□ -0.14
PTPN6-219ENST00000542848 Q7L0L9 218 aa14.2□□□□□ -0.14
PTPN6-219ENST00000542848 REPS2Q8NFH8 660 aa14.2□□□□□ -0.14
PTPN6-219ENST00000542848 GPATCH3Q96I76 525 aa14.2□□□□□ -0.14
PTPN6-219ENST00000542848 TINF2Q9BSI4 451 aa14.2□□□□□ -0.14
PTPN6-219ENST00000542848 MKNK2Q9HBH9 465 aa14.2□□□□□ -0.14
PTPN6-219ENST00000542848 NYAP2Q9P242 653 aa14.2□□□□□ -0.14
PTPN6-219ENST00000542848 ZNF214Q9UL59 606 aaPredicted RBP14.2□□□□□ -0.14
PTPN6-219ENST00000542848 ATP11BQ9Y2G3 1177 aa14.2□□□□□ -0.14
PTPN6-219ENST00000542848 STXBP5LQ9Y2K9 1186 aa14.2□□□□□ -0.14
PTPN6-219ENST00000542848 RNF113AO15541 343 aaKnown RBP14.19□□□□□ -0.14
PTPN6-219ENST00000542848 RAD21O60216 631 aa14.19□□□□□ -0.14
PTPN6-219ENST00000542848 ZFYP08048 801 aaPredicted RBP14.19□□□□□ -0.14
PTPN6-219ENST00000542848 RASA1P20936 1047 aa14.19□□□□□ -0.14
PTPN6-219ENST00000542848 C1orf53Q5VUE5 145 aa14.19□□□□□ -0.14
PTPN6-219ENST00000542848 FAM109BQ6ICB4 259 aaPredicted RBP14.19□□□□□ -0.14
PTPN6-219ENST00000542848 APPBP2Q92624 585 aa14.19□□□□□ -0.14
PTPN6-219ENST00000542848 ROBO3Q96MS0 1386 aa14.19□□□□□ -0.14
PTPN6-219ENST00000542848 CUL9Q8IWT3 2517 aa14.18□□□□□ -0.14
PTPN6-219ENST00000542848 MINDY4BA8MYZ0 360 aa14.18□□□□□ -0.14
PTPN6-219ENST00000542848 F5H6K3 240 aa14.18□□□□□ -0.14
PTPN6-219ENST00000542848 POTEB2H3BUK9 544 aa14.18□□□□□ -0.14
PTPN6-219ENST00000542848 MYCNP04198 464 aaPredicted RBP14.18□□□□□ -0.14
PTPN6-219ENST00000542848 PGK2P07205 417 aa14.18□□□□□ -0.14
PTPN6-219ENST00000542848 RARBP10826 455 aa14.18□□□□□ -0.14
PTPN6-219ENST00000542848 GNAT2P19087 354 aa14.18□□□□□ -0.14
PTPN6-219ENST00000542848 ADCYAP1R1P41586 468 aa14.18□□□□□ -0.14
PTPN6-219ENST00000542848 KLRC3Q07444 240 aa14.18□□□□□ -0.14
PTPN6-219ENST00000542848 PRPF38AQ8NAV1 312 aaKnown RBP14.18□□□□□ -0.14
PTPN6-219ENST00000542848 OSBP2Q969R2 916 aa14.18□□□□□ -0.14
PTPN6-219ENST00000542848 SLF1Q9BQI6 1058 aa14.18□□□□□ -0.14
PTPN6-219ENST00000542848 ZNF287Q9HBT7 754 aa14.18□□□□□ -0.14
PTPN6-219ENST00000542848 UNC80Q8N2C7 3258 aa14.17□□□□□ -0.14
PTPN6-219ENST00000542848 DLL1O00548 723 aa14.17□□□□□ -0.14
PTPN6-219ENST00000542848 LRRFIP1Q32MZ4 808 aaKnown RBP14.17□□□□□ -0.14
PTPN6-219ENST00000542848 TRIM60Q495X7 471 aa14.17□□□□□ -0.14
PTPN6-219ENST00000542848 FAM47AQ5JRC9 791 aa14.17□□□□□ -0.14
PTPN6-219ENST00000542848 ZNF444Q8N0Y2 327 aaPredicted RBP14.17□□□□□ -0.14
PTPN6-219ENST00000542848 MSL3Q8N5Y2 521 aaKnown RBP14.17□□□□□ -0.14
PTPN6-219ENST00000542848 MKL1Q969V6 931 aa14.17□□□□□ -0.14
PTPN6-219ENST00000542848 TEX13BQ9BXU2 312 aa14.17□□□□□ -0.14
PTPN6-219ENST00000542848 XPNPEP3Q9NQH7 507 aa14.17□□□□□ -0.14
PTPN6-219ENST00000542848 PHF24Q9UPV7 400 aa14.17□□□□□ -0.14
PTPN6-219ENST00000542848 IGKV6D-41A0A0C4DH26 115 aa14.16□□□□□ -0.14
PTPN6-219ENST00000542848 PATL2C9JE40 543 aaKnown RBP14.16□□□□□ -0.14
PTPN6-219ENST00000542848 ATP2A1O14983 1001 aa14.16□□□□□ -0.14
PTPN6-219ENST00000542848 GPAA1O43292 621 aa14.16□□□□□ -0.14
PTPN6-219ENST00000542848 ZNF865P0CJ78 1059 aaPredicted RBP14.16□□□□□ -0.14
PTPN6-219ENST00000542848 AKR1A1P14550 325 aa14.16□□□□□ -0.14
PTPN6-219ENST00000542848 RNF180Q86T96 592 aa14.16□□□□□ -0.14
PTPN6-219ENST00000542848 STK11IPQ8N1F8 1099 aa14.16□□□□□ -0.14
PTPN6-219ENST00000542848 FERMT2Q96AC1 680 aa14.16□□□□□ -0.14
PTPN6-219ENST00000542848 NUP88Q99567 741 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms