RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 FAM178BQ8IXR5 827 aa12.04□□□□□ -0.48
CHFR-220ENST00000541817 FAM126BQ8IXS8 530 aa12.04□□□□□ -0.48
CHFR-220ENST00000541817 TSEN34Q9BSV6 310 aaKnown RBP12.04□□□□□ -0.48
CHFR-220ENST00000541817 MTIF3Q9H2K0 278 aaKnown RBP12.04□□□□□ -0.48
CHFR-220ENST00000541817 AATFQ9NY61 560 aaKnown RBP eCLIP12.04□□□□□ -0.48
CHFR-220ENST00000541817 SLC5A4Q9NY91 659 aa12.04□□□□□ -0.48
CHFR-220ENST00000541817 PA2G4Q9UQ80 394 aaKnown RBP12.04□□□□□ -0.48
CHFR-220ENST00000541817 SALL2Q9Y467 1007 aaPredicted RBP12.04□□□□□ -0.48
CHFR-220ENST00000541817 CACNA1AO00555 2505 aa12.03□□□□□ -0.48
CHFR-220ENST00000541817 ST18O60284 1047 aa12.03□□□□□ -0.48
CHFR-220ENST00000541817 AKR1A1P14550 325 aa12.03□□□□□ -0.48
CHFR-220ENST00000541817 ATP2A2P16615 1042 aaKnown RBP12.03□□□□□ -0.48
CHFR-220ENST00000541817 HNRNPUQ00839 825 aaKnown RBP eCLIP12.03□□□□□ -0.48
CHFR-220ENST00000541817 GRB10Q13322 594 aa12.03□□□□□ -0.48
CHFR-220ENST00000541817 CCDC27Q2M243 656 aa12.03□□□□□ -0.48
CHFR-220ENST00000541817 HFE2Q6ZVN8 426 aa12.03□□□□□ -0.48
CHFR-220ENST00000541817 KLHDC9Q8NEP7 349 aa12.03□□□□□ -0.48
CHFR-220ENST00000541817 GLT1D1Q96MS3 346 aa12.03□□□□□ -0.48
CHFR-220ENST00000541817 DHX36Q9H2U1 1008 aaKnown RBP12.03□□□□□ -0.48
CHFR-220ENST00000541817 PRKRIP1Q9H875 184 aaPredicted RBP12.03□□□□□ -0.48
CHFR-220ENST00000541817 CFAP54Q96N23 3096 aa12.03□□□□□ -0.48
CHFR-220ENST00000541817 ARVCFO00192 962 aa12.02□□□□□ -0.49
CHFR-220ENST00000541817 ASGR1P07306 291 aa12.02□□□□□ -0.49
CHFR-220ENST00000541817 ALADP13716 330 aa12.02□□□□□ -0.49
CHFR-220ENST00000541817 GSTO1P78417 241 aa12.02□□□□□ -0.49
CHFR-220ENST00000541817 TMEM67Q5HYA8 995 aa12.02□□□□□ -0.49
CHFR-220ENST00000541817 METTL16Q86W50 562 aaKnown RBP12.02□□□□□ -0.49
CHFR-220ENST00000541817 PRSS33Q8NF86 280 aa12.02□□□□□ -0.49
CHFR-220ENST00000541817 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.02□□□□□ -0.49
CHFR-220ENST00000541817 VWCEQ96DN2 955 aa12.02□□□□□ -0.49
CHFR-220ENST00000541817 SCLYQ96I15 445 aa12.02□□□□□ -0.49
CHFR-220ENST00000541817 TINF2Q9BSI4 451 aa12.02□□□□□ -0.49
CHFR-220ENST00000541817 TANGO6Q9C0B7 1094 aa12.02□□□□□ -0.49
CHFR-220ENST00000541817 KIAA1683Q9H0B3 1180 aa12.02□□□□□ -0.49
CHFR-220ENST00000541817 HIPK3Q9H422 1215 aa12.02□□□□□ -0.49
CHFR-220ENST00000541817 HMG20BQ9P0W2 317 aa12.02□□□□□ -0.49
CHFR-220ENST00000541817 USP34Q70CQ2 3546 aa12.02□□□□□ -0.49
CHFR-220ENST00000541817 FLT1P17948 1338 aa12.02□□□□□ -0.49
CHFR-220ENST00000541817 MROH7Q68CQ1 1323 aa12.02□□□□□ -0.49
CHFR-220ENST00000541817 COL4A4P53420 1690 aaPredicted RBP12.01□□□□□ -0.49
CHFR-220ENST00000541817 MOXD2PA6NHM9 499 aa12.01□□□□□ -0.49
CHFR-220ENST00000541817 TLR3O15455 904 aaKnown RBP12.01□□□□□ -0.49
CHFR-220ENST00000541817 CD4P01730 458 aa12.01□□□□□ -0.49
CHFR-220ENST00000541817 C6orf222P0C671 652 aaPredicted RBP12.01□□□□□ -0.49
CHFR-220ENST00000541817 FCER1AP12319 257 aa12.01□□□□□ -0.49
CHFR-220ENST00000541817 USP14P54578 494 aa12.01□□□□□ -0.49
CHFR-220ENST00000541817 TAP1Q03518 808 aa12.01□□□□□ -0.49
CHFR-220ENST00000541817 TTLL4Q14679 1199 aa12.01□□□□□ -0.49
CHFR-220ENST00000541817 COG2Q14746 738 aa12.01□□□□□ -0.49
CHFR-220ENST00000541817 KIAA1755Q5JYT7 1200 aa12.01□□□□□ -0.49
CHFR-220ENST00000541817 SHCBP1Q8NEM2 672 aa12.01□□□□□ -0.49
CHFR-220ENST00000541817 XAGE2Q96GT9 111 aa12.01□□□□□ -0.49
CHFR-220ENST00000541817 MMP19Q99542 508 aa12.01□□□□□ -0.49
CHFR-220ENST00000541817 USP44Q9H0E7 712 aa12.01□□□□□ -0.49
CHFR-220ENST00000541817 WNT8AQ9H1J5 351 aa12.01□□□□□ -0.49
CHFR-220ENST00000541817 GINM1Q9NU53 330 aa12.01□□□□□ -0.49
CHFR-220ENST00000541817 A0A0U1RQG5 324 aaPredicted RBP12□□□□□ -0.49
CHFR-220ENST00000541817 RBAK-RBAKDNI3L0D1 243 aa12□□□□□ -0.49
CHFR-220ENST00000541817 ADCY6O43306 1168 aa12□□□□□ -0.49
CHFR-220ENST00000541817 DCXO43602 365 aa12□□□□□ -0.49
CHFR-220ENST00000541817 LPXNO60711 386 aa12□□□□□ -0.49
CHFR-220ENST00000541817 MAP4K4O95819 1239 aaPredicted RBP12□□□□□ -0.49
CHFR-220ENST00000541817 IER5LQ5T953 404 aa12□□□□□ -0.49
CHFR-220ENST00000541817 ADGRA1Q86SQ6 560 aa12□□□□□ -0.49
CHFR-220ENST00000541817 GDPD5Q8WTR4 605 aa12□□□□□ -0.49
CHFR-220ENST00000541817 ATG4CQ96DT6 458 aa12□□□□□ -0.49
CHFR-220ENST00000541817 NOL10Q9BSC4 688 aaKnown RBP12□□□□□ -0.49
CHFR-220ENST00000541817 KCNH6Q9H252 994 aa12□□□□□ -0.49
CHFR-220ENST00000541817 UBE2ZQ9H832 354 aaPredicted RBP12□□□□□ -0.49
CHFR-220ENST00000541817 MRS2Q9HD23 443 aa12□□□□□ -0.49
CHFR-220ENST00000541817 FAM86C1Q9NVL1 165 aa12□□□□□ -0.49
CHFR-220ENST00000541817 ZHX1Q9UKY1 873 aaPredicted RBP12□□□□□ -0.49
CHFR-220ENST00000541817 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12□□□□□ -0.49
CHFR-220ENST00000541817 KCNA5P22460 613 aa11.99□□□□□ -0.49
CHFR-220ENST00000541817 GUCY1A2P33402 732 aa11.99□□□□□ -0.49
CHFR-220ENST00000541817 DYNLL1P63167 89 aaKnown RBP11.99□□□□□ -0.49
CHFR-220ENST00000541817 BEX3Q00994 111 aa11.99□□□□□ -0.49
CHFR-220ENST00000541817 ZNF792Q3KQV3 632 aa11.99□□□□□ -0.49
CHFR-220ENST00000541817 DEFB128Q7Z7B8 93 aa11.99□□□□□ -0.49
CHFR-220ENST00000541817 ABRAQ8N0Z2 381 aa11.99□□□□□ -0.49
CHFR-220ENST00000541817 TRPV6Q9H1D0 765 aa11.99□□□□□ -0.49
CHFR-220ENST00000541817 MROH8Q9H579 483 aa11.99□□□□□ -0.49
CHFR-220ENST00000541817 NRBP1Q9UHY1 535 aa11.99□□□□□ -0.49
CHFR-220ENST00000541817 FAM184BQ9ULE4 1060 aa11.99□□□□□ -0.49
CHFR-220ENST00000541817 ELP1O95163 1332 aa11.99□□□□□ -0.49
CHFR-220ENST00000541817 COL11A1P12107 1806 aaPredicted RBP11.99□□□□□ -0.49
CHFR-220ENST00000541817 SCN5AQ14524 2016 aa11.99□□□□□ -0.49
CHFR-220ENST00000541817 FOCADQ5VW36 1801 aa11.98□□□□□ -0.49
CHFR-220ENST00000541817 PDS5AQ29RF7 1337 aaKnown RBP11.98□□□□□ -0.49
CHFR-220ENST00000541817 A0A1B0GUL7 405 aa11.98□□□□□ -0.49
CHFR-220ENST00000541817 A0A1W2PRG0 241 aa11.98□□□□□ -0.49
CHFR-220ENST00000541817 POTEB3A0JP26 581 aa11.98□□□□□ -0.49
CHFR-220ENST00000541817 CIAO1O76071 339 aa11.98□□□□□ -0.49
CHFR-220ENST00000541817 SNAI1O95863 264 aaPredicted RBP11.98□□□□□ -0.49
CHFR-220ENST00000541817 SEPT2Q15019 361 aa11.98□□□□□ -0.49
CHFR-220ENST00000541817 ABCB5Q2M3G0 1257 aa11.98□□□□□ -0.49
CHFR-220ENST00000541817 GNASQ5JWF2 1037 aa11.98□□□□□ -0.49
CHFR-220ENST00000541817 PTCRAQ6ISU1 281 aaPredicted RBP11.98□□□□□ -0.49
CHFR-220ENST00000541817 POTEBQ6S5H4 581 aa11.98□□□□□ -0.49
CHFR-220ENST00000541817 SPATA5Q8NB90 893 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms