RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 A0A0G2JMZ2 1700 aa28.8■■■□□ 2.2
LEMD3-203ENST00000541171 ABRAQ8N0Z2 381 aa28.79■■■□□ 2.2
LEMD3-203ENST00000541171 LBHD1Q9BQE6 289 aaPredicted RBP28.79■■■□□ 2.2
LEMD3-203ENST00000541171 GOPCQ9HD26 462 aa28.79■■■□□ 2.2
LEMD3-203ENST00000541171 ARPP21Q9UBL0 812 aaPredicted RBP28.79■■■□□ 2.2
LEMD3-203ENST00000541171 ZNF236Q9UL36 1845 aa28.78■■■□□ 2.2
LEMD3-203ENST00000541171 KBTBD13C9JR72 458 aa28.78■■■□□ 2.2
LEMD3-203ENST00000541171 SEPT4O43236 478 aa28.78■■■□□ 2.2
LEMD3-203ENST00000541171 SLC25A27O95847 323 aa28.78■■■□□ 2.2
LEMD3-203ENST00000541171 RTP1P59025 263 aa28.78■■■□□ 2.2
LEMD3-203ENST00000541171 GPR153Q6NV75 609 aa28.78■■■□□ 2.2
LEMD3-203ENST00000541171 MAML3Q96JK9 1138 aa28.78■■■□□ 2.2
LEMD3-203ENST00000541171 STRBPQ96SI9 672 aaKnown RBP28.78■■■□□ 2.2
LEMD3-203ENST00000541171 MMP19Q99542 508 aa28.78■■■□□ 2.2
LEMD3-203ENST00000541171 ATP11BQ9Y2G3 1177 aa28.78■■■□□ 2.2
LEMD3-203ENST00000541171 FAM83BQ5T0W9 1011 aa28.77■■■□□ 2.2
LEMD3-203ENST00000541171 TSHZ3Q63HK5 1081 aa28.77■■■□□ 2.2
LEMD3-203ENST00000541171 PRKAG2Q9UGJ0 569 aa28.77■■■□□ 2.2
LEMD3-203ENST00000541171 MYH7P12883 1935 aa28.77■■■□□ 2.2
LEMD3-203ENST00000541171 MINDY4BA8MYZ0 360 aa28.76■■■□□ 2.19
LEMD3-203ENST00000541171 PGK2P07205 417 aa28.76■■■□□ 2.19
LEMD3-203ENST00000541171 ADAMTS5Q9UNA0 930 aa28.76■■■□□ 2.19
LEMD3-203ENST00000541171 VWA5AO00534 786 aa28.75■■■□□ 2.19
LEMD3-203ENST00000541171 STAT3P40763 770 aa28.75■■■□□ 2.19
LEMD3-203ENST00000541171 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.75■■■□□ 2.19
LEMD3-203ENST00000541171 MKNK2Q9HBH9 465 aa28.75■■■□□ 2.19
LEMD3-203ENST00000541171 PPP1R9AQ9ULJ8 1098 aa28.75■■■□□ 2.19
LEMD3-203ENST00000541171 GSG1L2A8MUP6 293 aa28.74■■■□□ 2.19
LEMD3-203ENST00000541171 KCTD2Q14681 263 aa28.74■■■□□ 2.19
LEMD3-203ENST00000541171 SLC39A5Q6ZMH5 540 aa28.74■■■□□ 2.19
LEMD3-203ENST00000541171 RIOX2Q8IUF8 465 aa28.74■■■□□ 2.19
LEMD3-203ENST00000541171 KBTBD3Q8NAB2 608 aa28.74■■■□□ 2.19
LEMD3-203ENST00000541171 OSBP2Q969R2 916 aa28.74■■■□□ 2.19
LEMD3-203ENST00000541171 GPATCH3Q96I76 525 aa28.74■■■□□ 2.19
LEMD3-203ENST00000541171 NUP88Q99567 741 aaPredicted RBP28.74■■■□□ 2.19
LEMD3-203ENST00000541171 RASA1P20936 1047 aa28.73■■■□□ 2.19
LEMD3-203ENST00000541171 SBK1Q52WX2 424 aa28.73■■■□□ 2.19
LEMD3-203ENST00000541171 FAM47AQ5JRC9 791 aa28.73■■■□□ 2.19
LEMD3-203ENST00000541171 FERMT2Q96AC1 680 aa28.73■■■□□ 2.19
LEMD3-203ENST00000541171 ADCYAP1R1P41586 468 aa28.72■■■□□ 2.19
LEMD3-203ENST00000541171 LRRC41Q15345 812 aa28.72■■■□□ 2.19
LEMD3-203ENST00000541171 APPBP2Q92624 585 aa28.72■■■□□ 2.19
LEMD3-203ENST00000541171 DCTPP1Q9H773 170 aa28.72■■■□□ 2.19
LEMD3-203ENST00000541171 PRDM5Q9NQX1 630 aaPredicted RBP28.72■■■□□ 2.19
LEMD3-203ENST00000541171 DNAH12Q6ZR08 3092 aa28.71■■■□□ 2.19
LEMD3-203ENST00000541171 RNF113AO15541 343 aaKnown RBP28.71■■■□□ 2.19
LEMD3-203ENST00000541171 ZNF214Q9UL59 606 aaPredicted RBP28.71■■■□□ 2.19
LEMD3-203ENST00000541171 PARP14Q460N5 1801 aa28.71■■■□□ 2.19
LEMD3-203ENST00000541171 SLC4A3P48751 1232 aa28.7■■■□□ 2.18
LEMD3-203ENST00000541171 TRIM60Q495X7 471 aa28.7■■■□□ 2.18
LEMD3-203ENST00000541171 GIMAP6Q6P9H5 292 aa28.7■■■□□ 2.18
LEMD3-203ENST00000541171 REPS2Q8NFH8 660 aa28.7■■■□□ 2.18
LEMD3-203ENST00000541171 MTMR10Q9NXD2 777 aa28.7■■■□□ 2.18
LEMD3-203ENST00000541171 COL11A1P12107 1806 aaPredicted RBP28.7■■■□□ 2.18
LEMD3-203ENST00000541171 GPAA1O43292 621 aa28.69■■■□□ 2.18
LEMD3-203ENST00000541171 APPP05067 770 aa28.69■■■□□ 2.18
LEMD3-203ENST00000541171 TAL1P17542 331 aaPredicted RBP28.69■■■□□ 2.18
LEMD3-203ENST00000541171 TDO2P48775 406 aa28.69■■■□□ 2.18
LEMD3-203ENST00000541171 ZNF792Q3KQV3 632 aa28.69■■■□□ 2.18
LEMD3-203ENST00000541171 SLF1Q9BQI6 1058 aa28.69■■■□□ 2.18
LEMD3-203ENST00000541171 TINF2Q9BSI4 451 aa28.69■■■□□ 2.18
LEMD3-203ENST00000541171 NYAP2Q9P242 653 aa28.69■■■□□ 2.18
LEMD3-203ENST00000541171 CLIP2Q9UDT6 1046 aa28.69■■■□□ 2.18
LEMD3-203ENST00000541171 ZNFX1Q9P2E3 1918 aaKnown RBP28.69■■■□□ 2.18
LEMD3-203ENST00000541171 F5H6K3 240 aa28.68■■■□□ 2.18
LEMD3-203ENST00000541171 RARBP10826 455 aa28.68■■■□□ 2.18
LEMD3-203ENST00000541171 KLRC3Q07444 240 aa28.68■■■□□ 2.18
LEMD3-203ENST00000541171 EPB41L4AQ9HCS5 686 aaPredicted RBP28.68■■■□□ 2.18
LEMD3-203ENST00000541171 XPNPEP3Q9NQH7 507 aa28.68■■■□□ 2.18
LEMD3-203ENST00000541171 M0R2C6 588 aa28.67■■■□□ 2.18
LEMD3-203ENST00000541171 PRDM1O75626 825 aa28.67■■■□□ 2.18
LEMD3-203ENST00000541171 NDUFB10O96000 172 aa28.67■■■□□ 2.18
LEMD3-203ENST00000541171 ZFYP08048 801 aaPredicted RBP28.67■■■□□ 2.18
LEMD3-203ENST00000541171 COPB2P35606 906 aa28.67■■■□□ 2.18
LEMD3-203ENST00000541171 ZNF444Q8N0Y2 327 aaPredicted RBP28.67■■■□□ 2.18
LEMD3-203ENST00000541171 NRBP1Q9UHY1 535 aa28.67■■■□□ 2.18
LEMD3-203ENST00000541171 DIS3Q9Y2L1 958 aaKnown RBP28.67■■■□□ 2.18
LEMD3-203ENST00000541171 DLL1O00548 723 aa28.66■■■□□ 2.18
LEMD3-203ENST00000541171 PGK1P00558 417 aa28.66■■■□□ 2.18
LEMD3-203ENST00000541171 SNRNP48Q6IEG0 339 aaKnown RBP28.66■■■□□ 2.18
LEMD3-203ENST00000541171 STXBP5LQ9Y2K9 1186 aa28.66■■■□□ 2.18
LEMD3-203ENST00000541171 COL6A3P12111 3177 aa28.65■■■□□ 2.18
LEMD3-203ENST00000541171 GNAT2P19087 354 aa28.65■■■□□ 2.18
LEMD3-203ENST00000541171 CPXCR1Q8N123 301 aa28.65■■■□□ 2.18
LEMD3-203ENST00000541171 TEX13BQ9BXU2 312 aa28.65■■■□□ 2.18
LEMD3-203ENST00000541171 CTDP1Q9Y5B0 961 aaPredicted RBP28.65■■■□□ 2.18
LEMD3-203ENST00000541171 ROBO3Q96MS0 1386 aa28.64■■■□□ 2.18
LEMD3-203ENST00000541171 SNX17Q15036 470 aa28.64■■■□□ 2.18
LEMD3-203ENST00000541171 SH3RF1Q7Z6J0 888 aa28.64■■■□□ 2.18
LEMD3-203ENST00000541171 RNF180Q86T96 592 aa28.64■■■□□ 2.18
LEMD3-203ENST00000541171 PRPF38AQ8NAV1 312 aaKnown RBP28.64■■■□□ 2.18
LEMD3-203ENST00000541171 BADQ92934 168 aa28.64■■■□□ 2.18
LEMD3-203ENST00000541171 LENG1Q96BZ8 264 aaPredicted RBP28.64■■■□□ 2.18
LEMD3-203ENST00000541171 DDX11Q96FC9 970 aa28.64■■■□□ 2.18
LEMD3-203ENST00000541171 CNPY2Q9Y2B0 182 aa28.64■■■□□ 2.18
LEMD3-203ENST00000541171 RIPK3Q9Y572 518 aa28.64■■■□□ 2.18
LEMD3-203ENST00000541171 SMCHD1A6NHR9 2005 aa28.64■■■□□ 2.17
LEMD3-203ENST00000541171 PATL2C9JE40 543 aaKnown RBP28.63■■■□□ 2.17
LEMD3-203ENST00000541171 ZBED4O75132 1171 aa28.63■■■□□ 2.17
LEMD3-203ENST00000541171 ZNF865P0CJ78 1059 aaPredicted RBP28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms