RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 FANCLQ9NW38 375 aa10.74□□□□□ -0.69
TTC39C-203ENST00000540918 PCDHA12Q9UN75 941 aa10.74□□□□□ -0.69
TTC39C-203ENST00000540918 CCP110O43303 1012 aa10.73□□□□□ -0.69
TTC39C-203ENST00000540918 CASQ1P31415 396 aa10.73□□□□□ -0.69
TTC39C-203ENST00000540918 HSP90B2PQ58FF3 399 aa10.73□□□□□ -0.69
TTC39C-203ENST00000540918 MB21D2Q8IYB1 491 aaPredicted RBP10.73□□□□□ -0.69
TTC39C-203ENST00000540918 TBCKQ8TEA7 893 aa10.73□□□□□ -0.69
TTC39C-203ENST00000540918 USP17L15C9J2P7 530 aa10.73□□□□□ -0.69
TTC39C-203ENST00000540918 USP17L13C9JLJ4 530 aa10.73□□□□□ -0.69
TTC39C-203ENST00000540918 USP17L11C9JVI0 530 aa10.73□□□□□ -0.69
TTC39C-203ENST00000540918 USP17L18D6R9N7 530 aa10.73□□□□□ -0.69
TTC39C-203ENST00000540918 USP17L22D6RA61 530 aa10.73□□□□□ -0.69
TTC39C-203ENST00000540918 USP17L17D6RBQ6 530 aa10.73□□□□□ -0.69
TTC39C-203ENST00000540918 USP17L19D6RCP7 530 aa10.73□□□□□ -0.69
TTC39C-203ENST00000540918 USP17L20D6RJB6 530 aa10.73□□□□□ -0.69
TTC39C-203ENST00000540918 GYS1P13807 737 aa10.73□□□□□ -0.69
TTC39C-203ENST00000540918 TBC1D8BQ0IIM8 1120 aa10.73□□□□□ -0.69
TTC39C-203ENST00000540918 USP17L24Q0WX57 530 aa10.73□□□□□ -0.69
TTC39C-203ENST00000540918 PTPROQ16827 1216 aa10.73□□□□□ -0.69
TTC39C-203ENST00000540918 AXDND1Q5T1B0 1012 aaPredicted RBP10.73□□□□□ -0.69
TTC39C-203ENST00000540918 USP17L6PQ6QN14 398 aa10.73□□□□□ -0.69
TTC39C-203ENST00000540918 GADL1Q6ZQY3 521 aa10.73□□□□□ -0.69
TTC39C-203ENST00000540918 C11orf57Q6ZUT1 292 aaPredicted RBP10.73□□□□□ -0.69
TTC39C-203ENST00000540918 KRT25Q7Z3Z0 450 aa10.73□□□□□ -0.69
TTC39C-203ENST00000540918 FBXO11Q86XK2 927 aa10.73□□□□□ -0.69
TTC39C-203ENST00000540918 SMCR8Q8TEV9 937 aaPredicted RBP10.73□□□□□ -0.69
TTC39C-203ENST00000540918 TTLL1O95922 423 aa10.73□□□□□ -0.69
TTC39C-203ENST00000540918 MYCP01106 439 aaPredicted RBP10.73□□□□□ -0.69
TTC39C-203ENST00000540918 IFNAR1P17181 557 aa10.73□□□□□ -0.69
TTC39C-203ENST00000540918 GSDMDP57764 484 aa10.73□□□□□ -0.69
TTC39C-203ENST00000540918 RESTQ13127 1097 aa10.73□□□□□ -0.69
TTC39C-203ENST00000540918 LINC00301Q8NCQ3 95 aa10.73□□□□□ -0.69
TTC39C-203ENST00000540918 CRACR2AQ9BSW2 395 aa10.73□□□□□ -0.69
TTC39C-203ENST00000540918 LY9Q9HBG7 655 aa10.73□□□□□ -0.69
TTC39C-203ENST00000540918 FMNL1O95466 1100 aaPredicted RBP10.73□□□□□ -0.69
TTC39C-203ENST00000540918 SLURP2P0DP57 97 aa10.73□□□□□ -0.69
TTC39C-203ENST00000540918 RNASE9P60153 205 aaKnown RBP10.73□□□□□ -0.69
TTC39C-203ENST00000540918 GPS2Q13227 327 aa10.73□□□□□ -0.69
TTC39C-203ENST00000540918 LRRC41Q15345 812 aa10.73□□□□□ -0.69
TTC39C-203ENST00000540918 SF3B3Q15393 1217 aaKnown RBP10.73□□□□□ -0.69
TTC39C-203ENST00000540918 SYT10Q6XYQ8 523 aa10.73□□□□□ -0.69
TTC39C-203ENST00000540918 PAF1Q8N7H5 531 aa10.73□□□□□ -0.69
TTC39C-203ENST00000540918 LUC7LQ9NQ29 371 aaKnown RBP10.73□□□□□ -0.69
TTC39C-203ENST00000540918 PIM2Q9P1W9 311 aa10.73□□□□□ -0.69
TTC39C-203ENST00000540918 ARHGAP23Q9P227 1491 aa10.72□□□□□ -0.69
TTC39C-203ENST00000540918 SPDYE4A6NLX3 237 aa10.72□□□□□ -0.69
TTC39C-203ENST00000540918 FGFR1OPO95684 399 aaKnown RBP10.72□□□□□ -0.69
TTC39C-203ENST00000540918 AKR1B1P15121 316 aa10.72□□□□□ -0.69
TTC39C-203ENST00000540918 PPARDQ03181 441 aa10.72□□□□□ -0.69
TTC39C-203ENST00000540918 PSMB7Q99436 277 aa10.72□□□□□ -0.69
TTC39C-203ENST00000540918 BRIP1Q9BX63 1249 aa10.72□□□□□ -0.69
TTC39C-203ENST00000540918 KIF20AO95235 890 aa10.72□□□□□ -0.69
TTC39C-203ENST00000540918 SLC39A14Q15043 492 aa10.72□□□□□ -0.69
TTC39C-203ENST00000540918 SULF1Q8IWU6 871 aa10.72□□□□□ -0.69
TTC39C-203ENST00000540918 IGSF22Q8N9C0 903 aa10.72□□□□□ -0.69
TTC39C-203ENST00000540918 CAPZA3Q96KX2 299 aa10.72□□□□□ -0.69
TTC39C-203ENST00000540918 SRRTQ9BXP5 876 aaKnown RBP10.72□□□□□ -0.69
TTC39C-203ENST00000540918 SH2D4AQ9H788 454 aa10.72□□□□□ -0.69
TTC39C-203ENST00000540918 SPATA31A6Q5VVP1 1343 aa10.72□□□□□ -0.69
TTC39C-203ENST00000540918 USP42Q9H9J4 1324 aaKnown RBP10.72□□□□□ -0.69
TTC39C-203ENST00000540918 WDHD1O75717 1129 aaPredicted RBP10.72□□□□□ -0.69
TTC39C-203ENST00000540918 CAVIN2O95810 425 aa10.72□□□□□ -0.69
TTC39C-203ENST00000540918 NEK8Q86SG6 692 aa10.72□□□□□ -0.69
TTC39C-203ENST00000540918 NOC4LQ9BVI4 516 aaKnown RBP10.72□□□□□ -0.69
TTC39C-203ENST00000540918 COL5A2P05997 1499 aaPredicted RBP10.71□□□□□ -0.69
TTC39C-203ENST00000540918 KIF28PB7ZC32 967 aa10.71□□□□□ -0.69
TTC39C-203ENST00000540918 MMP1P03956 469 aa10.71□□□□□ -0.69
TTC39C-203ENST00000540918 IRX3P78415 501 aaPredicted RBP10.71□□□□□ -0.69
TTC39C-203ENST00000540918 CIAPIN1Q6FI81 312 aa10.71□□□□□ -0.69
TTC39C-203ENST00000540918 TTBK2Q6IQ55 1244 aa10.71□□□□□ -0.69
TTC39C-203ENST00000540918 ADGRA1Q86SQ6 560 aa10.71□□□□□ -0.69
TTC39C-203ENST00000540918 CTNNBL1Q8WYA6 563 aaPredicted RBP10.71□□□□□ -0.69
TTC39C-203ENST00000540918 TAOK3Q9H2K8 898 aa10.71□□□□□ -0.69
TTC39C-203ENST00000540918 NLRC4Q9NPP4 1024 aa10.71□□□□□ -0.69
TTC39C-203ENST00000540918 FAM207AQ9NSI2 230 aaPredicted RBP10.71□□□□□ -0.69
TTC39C-203ENST00000540918 TMEM260Q9NX78 707 aa10.71□□□□□ -0.69
TTC39C-203ENST00000540918 PI4KBQ9UBF8 816 aa10.71□□□□□ -0.69
TTC39C-203ENST00000540918 CCPG1Q9ULG6 757 aa10.71□□□□□ -0.69
TTC39C-203ENST00000540918 PP2D1A8MPX8 630 aa10.71□□□□□ -0.69
TTC39C-203ENST00000540918 PHACTR2O75167 634 aa10.71□□□□□ -0.69
TTC39C-203ENST00000540918 GJC1P36383 396 aa10.71□□□□□ -0.69
TTC39C-203ENST00000540918 CBX1P83916 185 aa10.71□□□□□ -0.69
TTC39C-203ENST00000540918 PABPC4Q13310 644 aaKnown RBP eCLIP10.71□□□□□ -0.69
TTC39C-203ENST00000540918 SLC27A3Q5K4L6 730 aa10.71□□□□□ -0.69
TTC39C-203ENST00000540918 PPP4R3BQ5MIZ7 849 aa10.71□□□□□ -0.69
TTC39C-203ENST00000540918 ATL3Q6DD88 541 aa10.71□□□□□ -0.69
TTC39C-203ENST00000540918 MYCT1Q8N699 235 aa10.71□□□□□ -0.69
TTC39C-203ENST00000540918 TAF4BQ92750 862 aa10.71□□□□□ -0.69
TTC39C-203ENST00000540918 RNF26Q9BY78 433 aaPredicted RBP10.71□□□□□ -0.69
TTC39C-203ENST00000540918 PRDM10Q9NQV6 1147 aa10.71□□□□□ -0.69
TTC39C-203ENST00000540918 PCDHB13Q9Y5F0 798 aa10.71□□□□□ -0.69
TTC39C-203ENST00000540918 GAS7O60861 476 aa10.71□□□□□ -0.7
TTC39C-203ENST00000540918 LIFRP42702 1097 aa10.71□□□□□ -0.7
TTC39C-203ENST00000540918 ZNF75DP51815 510 aa10.71□□□□□ -0.7
TTC39C-203ENST00000540918 ANTXR2P58335 489 aa10.71□□□□□ -0.7
TTC39C-203ENST00000540918 SYNRGQ9UMZ2 1314 aa10.7□□□□□ -0.7
TTC39C-203ENST00000540918 CMA1P23946 247 aa10.7□□□□□ -0.7
TTC39C-203ENST00000540918 KRBA2Q6ZNG9 492 aa10.7□□□□□ -0.7
TTC39C-203ENST00000540918 HS2ST1Q7LGA3 356 aa10.7□□□□□ -0.7
TTC39C-203ENST00000540918 NELFBQ8WX92 580 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms