RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 TMEM266Q2M3C6 531 aa11.13□□□□□ -0.63
PHC1-208ENST00000540574 CTAGE1Q96RT6 745 aa11.13□□□□□ -0.63
PHC1-208ENST00000540574 C6orf50Q9HD87 102 aa11.13□□□□□ -0.63
PHC1-208ENST00000540574 PLCD1P51178 756 aa11.13□□□□□ -0.63
PHC1-208ENST00000540574 CACNB1Q02641 598 aaPredicted RBP11.13□□□□□ -0.63
PHC1-208ENST00000540574 PTPAQ15257 358 aa11.13□□□□□ -0.63
PHC1-208ENST00000540574 ZYXQ15942 572 aaKnown RBP11.13□□□□□ -0.63
PHC1-208ENST00000540574 CCDC70Q6NSX1 233 aa11.13□□□□□ -0.63
PHC1-208ENST00000540574 RBM43Q6ZSC3 357 aaKnown RBP11.13□□□□□ -0.63
PHC1-208ENST00000540574 NBPF11Q86T75 865 aa11.13□□□□□ -0.63
PHC1-208ENST00000540574 HPS3Q969F9 1004 aa11.13□□□□□ -0.63
PHC1-208ENST00000540574 FAM207AQ9NSI2 230 aaPredicted RBP11.13□□□□□ -0.63
PHC1-208ENST00000540574 OGFRQ9NZT2 677 aa11.13□□□□□ -0.63
PHC1-208ENST00000540574 GGA1Q9UJY5 639 aa11.13□□□□□ -0.63
PHC1-208ENST00000540574 FBXO2Q9UK22 296 aaPredicted RBP11.13□□□□□ -0.63
PHC1-208ENST00000540574 SALL1Q9NSC2 1324 aa11.13□□□□□ -0.63
PHC1-208ENST00000540574 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.13□□□□□ -0.63
PHC1-208ENST00000540574 LMAN1P49257 510 aa11.13□□□□□ -0.63
PHC1-208ENST00000540574 MORC3Q14149 939 aa11.13□□□□□ -0.63
PHC1-208ENST00000540574 CCDC122Q5T0U0 273 aa11.13□□□□□ -0.63
PHC1-208ENST00000540574 NELFCDQ8IXH7 590 aa11.13□□□□□ -0.63
PHC1-208ENST00000540574 ANKRD13CQ8N6S4 541 aa11.13□□□□□ -0.63
PHC1-208ENST00000540574 FERMT2Q96AC1 680 aa11.13□□□□□ -0.63
PHC1-208ENST00000540574 RGPD5Q99666 1765 aa11.13□□□□□ -0.63
PHC1-208ENST00000540574 ABCC12Q96J65 1359 aa11.13□□□□□ -0.63
PHC1-208ENST00000540574 TCRBV5S4A2TA0A5A2 114 aa11.12□□□□□ -0.63
PHC1-208ENST00000540574 CTAGE9A4FU28 777 aa11.12□□□□□ -0.63
PHC1-208ENST00000540574 SLFN14P0C7P3 912 aa11.12□□□□□ -0.63
PHC1-208ENST00000540574 GNAQP50148 359 aa11.12□□□□□ -0.63
PHC1-208ENST00000540574 GSTO1P78417 241 aa11.12□□□□□ -0.63
PHC1-208ENST00000540574 MRPS25P82663 173 aaKnown RBP11.12□□□□□ -0.63
PHC1-208ENST00000540574 LRRN4CLQ8ND94 238 aa11.12□□□□□ -0.63
PHC1-208ENST00000540574 WDR66Q8TBY9 1149 aa11.12□□□□□ -0.63
PHC1-208ENST00000540574 TIGD1Q96MW7 591 aa11.12□□□□□ -0.63
PHC1-208ENST00000540574 CDCA7Q9BWT1 371 aaPredicted RBP11.12□□□□□ -0.63
PHC1-208ENST00000540574 KCNJ18B7U540 433 aa11.12□□□□□ -0.63
PHC1-208ENST00000540574 KCNJ12Q14500 433 aa11.12□□□□□ -0.63
PHC1-208ENST00000540574 KMT5BQ4FZB7 885 aa11.12□□□□□ -0.63
PHC1-208ENST00000540574 CABP7Q86V35 215 aa11.12□□□□□ -0.63
PHC1-208ENST00000540574 VGLL2Q8N8G2 317 aa11.12□□□□□ -0.63
PHC1-208ENST00000540574 ARHGEF1Q92888 912 aaKnown RBP11.12□□□□□ -0.63
PHC1-208ENST00000540574 RMND1Q9NWS8 449 aa11.12□□□□□ -0.63
PHC1-208ENST00000540574 ARPP21Q9UBL0 812 aaPredicted RBP11.12□□□□□ -0.63
PHC1-208ENST00000540574 LRRC41Q15345 812 aa11.12□□□□□ -0.63
PHC1-208ENST00000540574 USH1GQ495M9 461 aa11.12□□□□□ -0.63
PHC1-208ENST00000540574 SPATA1Q5VX52 437 aa11.12□□□□□ -0.63
PHC1-208ENST00000540574 TMTC3Q6ZXV5 915 aa11.12□□□□□ -0.63
PHC1-208ENST00000540574 KIAA0825Q8IV33 1275 aa11.12□□□□□ -0.63
PHC1-208ENST00000540574 NSUN4Q96CB9 384 aaKnown RBP11.12□□□□□ -0.63
PHC1-208ENST00000540574 CCDC43Q96MW1 224 aaKnown RBP11.12□□□□□ -0.63
PHC1-208ENST00000540574 NOC4LQ9BVI4 516 aaKnown RBP11.12□□□□□ -0.63
PHC1-208ENST00000540574 RABEP2Q9H5N1 569 aa11.12□□□□□ -0.63
PHC1-208ENST00000540574 RPN1P04843 607 aaKnown RBP11.11□□□□□ -0.63
PHC1-208ENST00000540574 FGFR2P21802 821 aa11.11□□□□□ -0.63
PHC1-208ENST00000540574 WDR24Q96S15 920 aa11.11□□□□□ -0.63
PHC1-208ENST00000540574 PIGSQ96S52 555 aa11.11□□□□□ -0.63
PHC1-208ENST00000540574 CRACR2AQ9BSW2 395 aa11.11□□□□□ -0.63
PHC1-208ENST00000540574 NLRC4Q9NPP4 1024 aa11.11□□□□□ -0.63
PHC1-208ENST00000540574 TCEAL9Q9UHQ7 104 aa11.11□□□□□ -0.63
PHC1-208ENST00000540574 ZMYND10O75800 440 aa11.11□□□□□ -0.63
PHC1-208ENST00000540574 DPP8Q6V1X1 898 aaPredicted RBP11.11□□□□□ -0.63
PHC1-208ENST00000540574 FCHSD1Q86WN1 690 aa11.11□□□□□ -0.63
PHC1-208ENST00000540574 CNGA4Q8IV77 575 aa11.11□□□□□ -0.63
PHC1-208ENST00000540574 PKD2L1Q9P0L9 805 aa11.11□□□□□ -0.63
PHC1-208ENST00000540574 TFR2Q9UP52 801 aa11.11□□□□□ -0.63
PHC1-208ENST00000540574 GOLGA6L9A6NEM1 432 aa11.11□□□□□ -0.63
PHC1-208ENST00000540574 GYS2P54840 703 aa11.11□□□□□ -0.63
PHC1-208ENST00000540574 SNAP25P60880 206 aa11.11□□□□□ -0.63
PHC1-208ENST00000540574 ALX1Q15699 326 aa11.11□□□□□ -0.63
PHC1-208ENST00000540574 GOLGA1Q92805 767 aa11.11□□□□□ -0.63
PHC1-208ENST00000540574 ATP8A2Q9NTI2 1148 aa11.11□□□□□ -0.63
PHC1-208ENST00000540574 LRWD1Q9UFC0 647 aa11.11□□□□□ -0.63
PHC1-208ENST00000540574 TTF2Q9UNY4 1162 aaKnown RBP11.11□□□□□ -0.63
PHC1-208ENST00000540574 SRCAPQ6ZRS2 3230 aa11.11□□□□□ -0.63
PHC1-208ENST00000540574 CTAGE15A4D2H0 777 aa11.1□□□□□ -0.63
PHC1-208ENST00000540574 PRPF3O43395 683 aaKnown RBP11.1□□□□□ -0.63
PHC1-208ENST00000540574 ERLIN1O75477 346 aa11.1□□□□□ -0.63
PHC1-208ENST00000540574 CTAGE8P0CG41 777 aa11.1□□□□□ -0.63
PHC1-208ENST00000540574 NCAPHQ15003 741 aa11.1□□□□□ -0.63
PHC1-208ENST00000540574 NONOQ15233 471 aaKnown RBP eCLIP11.1□□□□□ -0.63
PHC1-208ENST00000540574 TAF3Q5VWG9 929 aa11.1□□□□□ -0.63
PHC1-208ENST00000540574 CTAGE6Q86UF2 777 aa11.1□□□□□ -0.63
PHC1-208ENST00000540574 CTAGE4Q8IX94 777 aa11.1□□□□□ -0.63
PHC1-208ENST00000540574 GJA10Q969M2 543 aa11.1□□□□□ -0.63
PHC1-208ENST00000540574 CCDC42Q96M95 316 aa11.1□□□□□ -0.63
PHC1-208ENST00000540574 RUFY1Q96T51 708 aa11.1□□□□□ -0.63
PHC1-208ENST00000540574 TACC3Q9Y6A5 838 aa11.1□□□□□ -0.63
PHC1-208ENST00000540574 B4DLN1 442 aa11.1□□□□□ -0.63
PHC1-208ENST00000540574 GNA11P29992 359 aa11.1□□□□□ -0.63
PHC1-208ENST00000540574 CHMP4BP1P59074 171 aa11.1□□□□□ -0.63
PHC1-208ENST00000540574 SPAG1Q07617 926 aa11.1□□□□□ -0.63
PHC1-208ENST00000540574 PLS1Q14651 629 aa11.1□□□□□ -0.63
PHC1-208ENST00000540574 KCTD1Q719H9 257 aa11.1□□□□□ -0.63
PHC1-208ENST00000540574 SLC35F6Q8N357 371 aa11.1□□□□□ -0.63
PHC1-208ENST00000540574 SNX29Q8TEQ0 813 aa11.1□□□□□ -0.63
PHC1-208ENST00000540574 MAP3K14Q99558 947 aa11.1□□□□□ -0.63
PHC1-208ENST00000540574 CYP27A1Q02318 531 aa11.1□□□□□ -0.63
PHC1-208ENST00000540574 KRT79Q5XKE5 535 aa11.1□□□□□ -0.63
PHC1-208ENST00000540574 REXO1Q8N1G1 1221 aaKnown RBP11.1□□□□□ -0.63
PHC1-208ENST00000540574 ENOX1Q8TC92 643 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms