RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 PPP1R9AQ9ULJ8 1098 aa24.98■■□□□ 1.59
CHFR-217ENST00000540537 COL11A1P12107 1806 aaPredicted RBP24.98■■□□□ 1.59
CHFR-217ENST00000540537 PLIN4Q96Q06 1357 aa24.97■■□□□ 1.59
CHFR-217ENST00000540537 RAD21O60216 631 aa24.97■■□□□ 1.59
CHFR-217ENST00000540537 ADORA2AP29274 412 aa24.97■■□□□ 1.59
CHFR-217ENST00000540537 PPARAQ07869 468 aa24.97■■□□□ 1.59
CHFR-217ENST00000540537 HABP4Q5JVS0 413 aaKnown RBP24.97■■□□□ 1.59
CHFR-217ENST00000540537 SAMD1Q6SPF0 538 aaPredicted RBP24.97■■□□□ 1.59
CHFR-217ENST00000540537 CCDC129Q6ZRS4 1044 aa24.97■■□□□ 1.59
CHFR-217ENST00000540537 ABRAQ8N0Z2 381 aa24.97■■□□□ 1.59
CHFR-217ENST00000540537 NPLOC4Q8TAT6 608 aa24.97■■□□□ 1.59
CHFR-217ENST00000540537 DIS3LQ8TF46 1054 aaKnown RBP24.97■■□□□ 1.59
CHFR-217ENST00000540537 LNPKQ9C0E8 428 aa24.97■■□□□ 1.59
CHFR-217ENST00000540537 FBXO28Q9NVF7 368 aa24.97■■□□□ 1.59
CHFR-217ENST00000540537 SYNPO2Q9UMS6 1093 aa24.97■■□□□ 1.59
CHFR-217ENST00000540537 NR2E3Q9Y5X4 410 aa24.97■■□□□ 1.59
CHFR-217ENST00000540537 FOXP2O15409 715 aa24.96■■□□□ 1.59
CHFR-217ENST00000540537 SLC25A27O95847 323 aa24.96■■□□□ 1.59
CHFR-217ENST00000540537 CCND3P30281 292 aaPredicted RBP24.96■■□□□ 1.59
CHFR-217ENST00000540537 TMEM132BQ14DG7 1078 aa24.96■■□□□ 1.59
CHFR-217ENST00000540537 DPP9Q86TI2 863 aa24.96■■□□□ 1.59
CHFR-217ENST00000540537 NCAPG2Q86XI2 1143 aa24.96■■□□□ 1.59
CHFR-217ENST00000540537 MKL1Q969V6 931 aa24.96■■□□□ 1.59
CHFR-217ENST00000540537 HELLSQ9NRZ9 838 aa24.96■■□□□ 1.59
CHFR-217ENST00000540537 F5H6K3 240 aa24.95■■□□□ 1.58
CHFR-217ENST00000540537 VWA5AO00534 786 aa24.95■■□□□ 1.58
CHFR-217ENST00000540537 IGHA2P01877 340 aa24.95■■□□□ 1.58
CHFR-217ENST00000540537 MNX1P50219 401 aaPredicted RBP24.95■■□□□ 1.58
CHFR-217ENST00000540537 KLRC3Q07444 240 aa24.95■■□□□ 1.58
CHFR-217ENST00000540537 OLFML2BQ68BL8 750 aa24.95■■□□□ 1.58
CHFR-217ENST00000540537 NEDD1Q8NHV4 660 aa24.95■■□□□ 1.58
CHFR-217ENST00000540537 EXOC6Q8TAG9 804 aa24.95■■□□□ 1.58
CHFR-217ENST00000540537 CEP95Q96GE4 821 aa24.95■■□□□ 1.58
CHFR-217ENST00000540537 NBPF3Q9H094 633 aa24.95■■□□□ 1.58
CHFR-217ENST00000540537 MTMR4Q9NYA4 1195 aa24.95■■□□□ 1.58
CHFR-217ENST00000540537 CLIP2Q9UDT6 1046 aa24.95■■□□□ 1.58
CHFR-217ENST00000540537 TTLL1O95922 423 aa24.94■■□□□ 1.58
CHFR-217ENST00000540537 NDUFB10O96000 172 aa24.94■■□□□ 1.58
CHFR-217ENST00000540537 TSPY3P0CV98 308 aa24.94■■□□□ 1.58
CHFR-217ENST00000540537 TSPY8P0CW00 308 aa24.94■■□□□ 1.58
CHFR-217ENST00000540537 SLC5A4Q9NY91 659 aa24.94■■□□□ 1.58
CHFR-217ENST00000540537 ALPK3Q96L96 1907 aa24.94■■□□□ 1.58
CHFR-217ENST00000540537 ZNFX1Q9P2E3 1918 aaKnown RBP24.93■■□□□ 1.58
CHFR-217ENST00000540537 IGHDP01880 384 aa24.93■■□□□ 1.58
CHFR-217ENST00000540537 LHX8Q68G74 356 aa24.93■■□□□ 1.58
CHFR-217ENST00000540537 RIOX2Q8IUF8 465 aa24.93■■□□□ 1.58
CHFR-217ENST00000540537 REPS2Q8NFH8 660 aa24.93■■□□□ 1.58
CHFR-217ENST00000540537 NUP88Q99567 741 aaPredicted RBP24.93■■□□□ 1.58
CHFR-217ENST00000540537 SLF1Q9BQI6 1058 aa24.93■■□□□ 1.58
CHFR-217ENST00000540537 COLQQ9Y215 455 aaPredicted RBP24.93■■□□□ 1.58
CHFR-217ENST00000540537 FRMPD3Q5JV73 1810 aa24.93■■□□□ 1.58
CHFR-217ENST00000540537 EVI5O60447 810 aa24.92■■□□□ 1.58
CHFR-217ENST00000540537 COPB2P35606 906 aa24.92■■□□□ 1.58
CHFR-217ENST00000540537 ALX1Q15699 326 aa24.92■■□□□ 1.58
CHFR-217ENST00000540537 B4GALNT3Q6L9W6 998 aa24.92■■□□□ 1.58
CHFR-217ENST00000540537 CHD1LQ86WJ1 897 aa24.92■■□□□ 1.58
CHFR-217ENST00000540537 GMCL1P1Q8NEA9 526 aa24.92■■□□□ 1.58
CHFR-217ENST00000540537 C11orf49Q9H6J7 331 aa24.92■■□□□ 1.58
CHFR-217ENST00000540537 ZNF214Q9UL59 606 aaPredicted RBP24.92■■□□□ 1.58
CHFR-217ENST00000540537 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.92■■□□□ 1.58
CHFR-217ENST00000540537 MSCO60682 206 aa24.91■■□□□ 1.58
CHFR-217ENST00000540537 COBLO75128 1261 aa24.91■■□□□ 1.58
CHFR-217ENST00000540537 FCER1AP12319 257 aa24.91■■□□□ 1.58
CHFR-217ENST00000540537 CYP2C19P33261 490 aa24.91■■□□□ 1.58
CHFR-217ENST00000540537 STAT3P40763 770 aa24.91■■□□□ 1.58
CHFR-217ENST00000540537 TFAP4Q01664 338 aa24.91■■□□□ 1.58
CHFR-217ENST00000540537 NUCB1Q02818 461 aa24.91■■□□□ 1.58
CHFR-217ENST00000540537 MCMDC2Q4G0Z9 681 aa24.91■■□□□ 1.58
CHFR-217ENST00000540537 VPS53Q5VIR6 699 aa24.91■■□□□ 1.58
CHFR-217ENST00000540537 FAM227BQ96M60 508 aa24.91■■□□□ 1.58
CHFR-217ENST00000540537 ANAPC4Q9UJX5 808 aa24.91■■□□□ 1.58
CHFR-217ENST00000540537 A0A0D9SFI3 127 aa24.9■■□□□ 1.58
CHFR-217ENST00000540537 TRIM6-TRIM34B2RNG4 842 aa24.9■■□□□ 1.58
CHFR-217ENST00000540537 FAM47AQ5JRC9 791 aa24.9■■□□□ 1.58
CHFR-217ENST00000540537 PPP4R3BQ5MIZ7 849 aa24.9■■□□□ 1.58
CHFR-217ENST00000540537 PRPF38AQ8NAV1 312 aaKnown RBP24.9■■□□□ 1.58
CHFR-217ENST00000540537 OSBPL3Q9H4L5 887 aa24.9■■□□□ 1.58
CHFR-217ENST00000540537 TRIOBPQ9H2D6 2365 aa24.89■■□□□ 1.58
CHFR-217ENST00000540537 CYBAP13498 195 aa24.89■■□□□ 1.58
CHFR-217ENST00000540537 CTDSPL2Q05D32 466 aa24.89■■□□□ 1.58
CHFR-217ENST00000540537 PLEKHM2Q8IWE5 1019 aa24.89■■□□□ 1.58
CHFR-217ENST00000540537 LRRC47Q8N1G4 583 aaKnown RBP24.89■■□□□ 1.58
CHFR-217ENST00000540537 MMP19Q99542 508 aa24.89■■□□□ 1.58
CHFR-217ENST00000540537 DDX20Q9UHI6 824 aaKnown RBP24.89■■□□□ 1.58
CHFR-217ENST00000540537 CHRDL2Q6WN34 429 aa24.88■■□□□ 1.57
CHFR-217ENST00000540537 TRPV1Q8NER1 839 aa24.88■■□□□ 1.57
CHFR-217ENST00000540537 TEX13BQ9BXU2 312 aa24.88■■□□□ 1.57
CHFR-217ENST00000540537 FEM1BQ9UK73 627 aa24.88■■□□□ 1.57
CHFR-217ENST00000540537 ZMYM6O95789 1325 aa24.87■■□□□ 1.57
CHFR-217ENST00000540537 TSPY2A6NKD2 308 aa24.87■■□□□ 1.57
CHFR-217ENST00000540537 CNGA1P29973 690 aa24.87■■□□□ 1.57
CHFR-217ENST00000540537 NMIQ13287 307 aaPredicted RBP24.87■■□□□ 1.57
CHFR-217ENST00000540537 KCTD2Q14681 263 aa24.87■■□□□ 1.57
CHFR-217ENST00000540537 SLFN13Q68D06 897 aa24.87■■□□□ 1.57
CHFR-217ENST00000540537 RILPL2Q969X0 211 aa24.87■■□□□ 1.57
CHFR-217ENST00000540537 MAML3Q96JK9 1138 aa24.87■■□□□ 1.57
CHFR-217ENST00000540537 SUPT16HQ9Y5B9 1047 aaKnown RBP24.87■■□□□ 1.57
CHFR-217ENST00000540537 PFASO15067 1338 aa24.86■■□□□ 1.57
CHFR-217ENST00000540537 ATP2A1O14983 1001 aa24.86■■□□□ 1.57
CHFR-217ENST00000540537 ORC4O43929 436 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms