RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 Q7L0L9 218 aa14.43□□□□□ -0.1
CBX3P4-202ENST00000540428 RIOX2Q8IUF8 465 aa14.43□□□□□ -0.1
CBX3P4-202ENST00000540428 LRRCC1Q9C099 1032 aa14.43□□□□□ -0.1
CBX3P4-202ENST00000540428 GOPCQ9HD26 462 aa14.43□□□□□ -0.1
CBX3P4-202ENST00000540428 ARPP21Q9UBL0 812 aaPredicted RBP14.43□□□□□ -0.1
CBX3P4-202ENST00000540428 DIS3Q9Y2L1 958 aaKnown RBP14.43□□□□□ -0.1
CBX3P4-202ENST00000540428 RLFQ13129 1914 aa14.43□□□□□ -0.1
CBX3P4-202ENST00000540428 SMIM22K7EJ46 135 aa14.42□□□□□ -0.1
CBX3P4-202ENST00000540428 PUS7LQ9H0K6 701 aaKnown RBP14.42□□□□□ -0.1
CBX3P4-202ENST00000540428 BCL11AQ9H165 835 aa14.42□□□□□ -0.1
CBX3P4-202ENST00000540428 PPP1R9AQ9ULJ8 1098 aa14.42□□□□□ -0.1
CBX3P4-202ENST00000540428 POTEB2H3BUK9 544 aa14.41□□□□□ -0.1
CBX3P4-202ENST00000540428 VWA5AO00534 786 aa14.41□□□□□ -0.1
CBX3P4-202ENST00000540428 DLL1O00548 723 aa14.41□□□□□ -0.1
CBX3P4-202ENST00000540428 KCTD2Q14681 263 aa14.41□□□□□ -0.1
CBX3P4-202ENST00000540428 SBK1Q52WX2 424 aa14.41□□□□□ -0.1
CBX3P4-202ENST00000540428 GIMAP6Q6P9H5 292 aa14.41□□□□□ -0.1
CBX3P4-202ENST00000540428 MMP19Q99542 508 aa14.41□□□□□ -0.1
CBX3P4-202ENST00000540428 RCAN3Q9UKA8 241 aa14.41□□□□□ -0.1
CBX3P4-202ENST00000540428 ATP11BQ9Y2G3 1177 aa14.41□□□□□ -0.1
CBX3P4-202ENST00000540428 ROBO3Q96MS0 1386 aa14.41□□□□□ -0.1
CBX3P4-202ENST00000540428 CHGBP05060 677 aa14.4□□□□□ -0.1
CBX3P4-202ENST00000540428 STAT3P40763 770 aa14.4□□□□□ -0.1
CBX3P4-202ENST00000540428 LRRC41Q15345 812 aa14.4□□□□□ -0.1
CBX3P4-202ENST00000540428 ZNF792Q3KQV3 632 aa14.4□□□□□ -0.1
CBX3P4-202ENST00000540428 PRAMEF19Q5SWL8 479 aa14.4□□□□□ -0.1
CBX3P4-202ENST00000540428 ANO1Q5XXA6 986 aa14.4□□□□□ -0.1
CBX3P4-202ENST00000540428 REPS2Q8NFH8 660 aa14.4□□□□□ -0.1
CBX3P4-202ENST00000540428 STRBPQ96SI9 672 aaKnown RBP14.4□□□□□ -0.1
CBX3P4-202ENST00000540428 ECHDC1Q9NTX5 307 aa14.4□□□□□ -0.1
CBX3P4-202ENST00000540428 FBXO28Q9NVF7 368 aa14.4□□□□□ -0.1
CBX3P4-202ENST00000540428 ZNF214Q9UL59 606 aaPredicted RBP14.4□□□□□ -0.1
CBX3P4-202ENST00000540428 RARBP10826 455 aa14.39□□□□□ -0.11
CBX3P4-202ENST00000540428 FAM47AQ5JRC9 791 aa14.39□□□□□ -0.11
CBX3P4-202ENST00000540428 SAMD1Q6SPF0 538 aaPredicted RBP14.39□□□□□ -0.11
CBX3P4-202ENST00000540428 MSL3Q8N5Y2 521 aaKnown RBP14.39□□□□□ -0.11
CBX3P4-202ENST00000540428 KBTBD3Q8NAB2 608 aa14.39□□□□□ -0.11
CBX3P4-202ENST00000540428 TINF2Q9BSI4 451 aa14.39□□□□□ -0.11
CBX3P4-202ENST00000540428 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.39□□□□□ -0.11
CBX3P4-202ENST00000540428 NYAP2Q9P242 653 aa14.39□□□□□ -0.11
CBX3P4-202ENST00000540428 PHF24Q9UPV7 400 aa14.39□□□□□ -0.11
CBX3P4-202ENST00000540428 COL6A3P12111 3177 aa14.38□□□□□ -0.11
CBX3P4-202ENST00000540428 RASA1P20936 1047 aa14.38□□□□□ -0.11
CBX3P4-202ENST00000540428 ADCYAP1R1P41586 468 aa14.38□□□□□ -0.11
CBX3P4-202ENST00000540428 TRIM60Q495X7 471 aa14.38□□□□□ -0.11
CBX3P4-202ENST00000540428 FAM83BQ5T0W9 1011 aa14.38□□□□□ -0.11
CBX3P4-202ENST00000540428 RNF180Q86T96 592 aa14.38□□□□□ -0.11
CBX3P4-202ENST00000540428 APPBP2Q92624 585 aa14.38□□□□□ -0.11
CBX3P4-202ENST00000540428 XPNPEP3Q9NQH7 507 aa14.38□□□□□ -0.11
CBX3P4-202ENST00000540428 PDLIM7Q9NR12 457 aa14.38□□□□□ -0.11
CBX3P4-202ENST00000540428 GSG1L2A8MUP6 293 aa14.37□□□□□ -0.11
CBX3P4-202ENST00000540428 ATP2A1O14983 1001 aa14.37□□□□□ -0.11
CBX3P4-202ENST00000540428 SMARCA5O60264 1052 aaPredicted RBP14.37□□□□□ -0.11
CBX3P4-202ENST00000540428 MYCNP04198 464 aaPredicted RBP14.37□□□□□ -0.11
CBX3P4-202ENST00000540428 PGK2P07205 417 aa14.37□□□□□ -0.11
CBX3P4-202ENST00000540428 ZFYP08048 801 aaPredicted RBP14.37□□□□□ -0.11
CBX3P4-202ENST00000540428 AKR1A1P14550 325 aa14.37□□□□□ -0.11
CBX3P4-202ENST00000540428 GNAT2P19087 354 aa14.37□□□□□ -0.11
CBX3P4-202ENST00000540428 GPATCH3Q96I76 525 aa14.37□□□□□ -0.11
CBX3P4-202ENST00000540428 SLF1Q9BQI6 1058 aa14.37□□□□□ -0.11
CBX3P4-202ENST00000540428 TEX13BQ9BXU2 312 aa14.37□□□□□ -0.11
CBX3P4-202ENST00000540428 MKNK2Q9HBH9 465 aa14.37□□□□□ -0.11
CBX3P4-202ENST00000540428 ZNF287Q9HBT7 754 aa14.37□□□□□ -0.11
CBX3P4-202ENST00000540428 PRDM5Q9NQX1 630 aaPredicted RBP14.37□□□□□ -0.11
CBX3P4-202ENST00000540428 SYNPO2Q9UMS6 1093 aa14.37□□□□□ -0.11
CBX3P4-202ENST00000540428 MYH8P13535 1937 aa14.37□□□□□ -0.11
CBX3P4-202ENST00000540428 BAZ2AQ9UIF9 1905 aaKnown RBP14.37□□□□□ -0.11
CBX3P4-202ENST00000540428 F5H6K3 240 aa14.36□□□□□ -0.11
CBX3P4-202ENST00000540428 RAD21O60216 631 aa14.36□□□□□ -0.11
CBX3P4-202ENST00000540428 ZNF865P0CJ78 1059 aaPredicted RBP14.36□□□□□ -0.11
CBX3P4-202ENST00000540428 KLRC3Q07444 240 aa14.36□□□□□ -0.11
CBX3P4-202ENST00000540428 ZNF697Q5TEC3 545 aa14.36□□□□□ -0.11
CBX3P4-202ENST00000540428 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.36□□□□□ -0.11
CBX3P4-202ENST00000540428 PRPF38AQ8NAV1 312 aaKnown RBP14.36□□□□□ -0.11
CBX3P4-202ENST00000540428 BADQ92934 168 aa14.36□□□□□ -0.11
CBX3P4-202ENST00000540428 OSBP2Q969R2 916 aa14.36□□□□□ -0.11
CBX3P4-202ENST00000540428 FERMT2Q96AC1 680 aa14.36□□□□□ -0.11
CBX3P4-202ENST00000540428 GUCD1Q96NT3 240 aa14.36□□□□□ -0.11
CBX3P4-202ENST00000540428 CNPY2Q9Y2B0 182 aa14.36□□□□□ -0.11
CBX3P4-202ENST00000540428 TACC3Q9Y6A5 838 aa14.36□□□□□ -0.11
CBX3P4-202ENST00000540428 PARP14Q460N5 1801 aa14.36□□□□□ -0.11
CBX3P4-202ENST00000540428 IGKV6D-41A0A0C4DH26 115 aa14.35□□□□□ -0.11
CBX3P4-202ENST00000540428 RNF113AO15541 343 aaKnown RBP14.35□□□□□ -0.11
CBX3P4-202ENST00000540428 NDUFB10O96000 172 aa14.35□□□□□ -0.11
CBX3P4-202ENST00000540428 TLE2Q04725 743 aa14.35□□□□□ -0.11
CBX3P4-202ENST00000540428 SHHQ15465 462 aa14.35□□□□□ -0.11
CBX3P4-202ENST00000540428 LRRFIP1Q32MZ4 808 aaKnown RBP14.35□□□□□ -0.11
CBX3P4-202ENST00000540428 SNRNP48Q6IEG0 339 aaKnown RBP14.35□□□□□ -0.11
CBX3P4-202ENST00000540428 MAMDC4Q6UXC1 1216 aa14.35□□□□□ -0.11
CBX3P4-202ENST00000540428 ZNF467Q7Z7K2 595 aaPredicted RBP14.35□□□□□ -0.11
CBX3P4-202ENST00000540428 MKL1Q969V6 931 aa14.35□□□□□ -0.11
CBX3P4-202ENST00000540428 TSEN34Q9BSV6 310 aaKnown RBP14.35□□□□□ -0.11
CBX3P4-202ENST00000540428 DCTPP1Q9H773 170 aa14.35□□□□□ -0.11
CBX3P4-202ENST00000540428 SYNGAP1Q96PV0 1343 aa14.35□□□□□ -0.11
CBX3P4-202ENST00000540428 LTBP2Q14767 1821 aa14.34□□□□□ -0.11
CBX3P4-202ENST00000540428 DNAJC25-GNG10A0A024R161 153 aa14.34□□□□□ -0.11
CBX3P4-202ENST00000540428 TRIM43BA6NCK2 446 aa14.34□□□□□ -0.11
CBX3P4-202ENST00000540428 MINDY4BA8MYZ0 360 aa14.34□□□□□ -0.11
CBX3P4-202ENST00000540428 GPAA1O43292 621 aa14.34□□□□□ -0.11
CBX3P4-202ENST00000540428 ZBED4O75132 1171 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms