RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 RNF208Q9H0X6 261 aa18.58■□□□□ 0.56
CIT-210ENST00000539413 TNRC18O15417 2968 aaPredicted RBP18.57■□□□□ 0.56
CIT-210ENST00000539413 ORC4O43929 436 aa18.57■□□□□ 0.56
CIT-210ENST00000539413 RANBP6O60518 1105 aaKnown RBP18.57■□□□□ 0.56
CIT-210ENST00000539413 NMT2O60551 498 aa18.57■□□□□ 0.56
CIT-210ENST00000539413 PTPREP23469 700 aa18.57■□□□□ 0.56
CIT-210ENST00000539413 TRIM32Q13049 653 aa18.57■□□□□ 0.56
CIT-210ENST00000539413 MB21D1Q8N884 522 aa18.57■□□□□ 0.56
CIT-210ENST00000539413 TRIB2Q92519 343 aa18.57■□□□□ 0.56
CIT-210ENST00000539413 NBPF3Q9H094 633 aa18.57■□□□□ 0.56
CIT-210ENST00000539413 IL25Q9H293 177 aa18.57■□□□□ 0.56
CIT-210ENST00000539413 IL17RBQ9NRM6 502 aa18.57■□□□□ 0.56
CIT-210ENST00000539413 TOMM22Q9NS69 142 aa18.57■□□□□ 0.56
CIT-210ENST00000539413 PPP1R9AQ9ULJ8 1098 aa18.57■□□□□ 0.56
CIT-210ENST00000539413 ADAMTS5Q9UNA0 930 aa18.57■□□□□ 0.56
CIT-210ENST00000539413 DOCK3Q8IZD9 2030 aa18.56■□□□□ 0.56
CIT-210ENST00000539413 HMGCRP04035 888 aa18.56■□□□□ 0.56
CIT-210ENST00000539413 GJB1P08034 283 aa18.56■□□□□ 0.56
CIT-210ENST00000539413 XRCC5P13010 732 aaKnown RBP18.56■□□□□ 0.56
CIT-210ENST00000539413 RGS2P41220 211 aa18.56■□□□□ 0.56
CIT-210ENST00000539413 PLS1Q14651 629 aa18.56■□□□□ 0.56
CIT-210ENST00000539413 TMEM132BQ14DG7 1078 aa18.56■□□□□ 0.56
CIT-210ENST00000539413 RRP12Q5JTH9 1297 aaKnown RBP18.56■□□□□ 0.56
CIT-210ENST00000539413 TBC1D10CQ8IV04 446 aa18.56■□□□□ 0.56
CIT-210ENST00000539413 GMCL1P1Q8NEA9 526 aa18.56■□□□□ 0.56
CIT-210ENST00000539413 SHISA4Q96DD7 197 aa18.56■□□□□ 0.56
CIT-210ENST00000539413 SYNPO2Q9UMS6 1093 aa18.56■□□□□ 0.56
CIT-210ENST00000539413 STX8Q9UNK0 236 aa18.56■□□□□ 0.56
CIT-210ENST00000539413 MYH4Q9Y623 1939 aa18.56■□□□□ 0.56
CIT-210ENST00000539413 BRCA2P51587 3418 aa18.56■□□□□ 0.56
CIT-210ENST00000539413 ERCC3P19447 782 aa18.55■□□□□ 0.56
CIT-210ENST00000539413 GJA8P48165 433 aa18.55■□□□□ 0.56
CIT-210ENST00000539413 MAP2K5Q13163 448 aa18.55■□□□□ 0.56
CIT-210ENST00000539413 CCL14Q16627 93 aa18.55■□□□□ 0.56
CIT-210ENST00000539413 SLFN13Q68D06 897 aa18.55■□□□□ 0.56
CIT-210ENST00000539413 SHCBP1Q8NEM2 672 aa18.55■□□□□ 0.56
CIT-210ENST00000539413 IVNS1ABPQ9Y6Y0 642 aa18.55■□□□□ 0.56
CIT-210ENST00000539413 SLC15A5A6NIM6 579 aa18.54■□□□□ 0.56
CIT-210ENST00000539413 VWA5AO00534 786 aa18.54■□□□□ 0.56
CIT-210ENST00000539413 GRB14Q14449 540 aa18.54■□□□□ 0.56
CIT-210ENST00000539413 AKNAD1Q5T1N1 836 aa18.54■□□□□ 0.56
CIT-210ENST00000539413 NKX2-3Q8TAU0 364 aa18.54■□□□□ 0.56
CIT-210ENST00000539413 APBA2Q99767 749 aa18.54■□□□□ 0.56
CIT-210ENST00000539413 SLF1Q9BQI6 1058 aa18.54■□□□□ 0.56
CIT-210ENST00000539413 ZNF213O14771 459 aa18.53■□□□□ 0.56
CIT-210ENST00000539413 ZKSCAN1P17029 563 aaPredicted RBP18.53■□□□□ 0.56
CIT-210ENST00000539413 NOVP48745 357 aa18.53■□□□□ 0.56
CIT-210ENST00000539413 PPP4R3BQ5MIZ7 849 aa18.53■□□□□ 0.56
CIT-210ENST00000539413 MFSD6Q6ZSS7 791 aa18.53■□□□□ 0.56
CIT-210ENST00000539413 NCAPG2Q86XI2 1143 aa18.53■□□□□ 0.56
CIT-210ENST00000539413 REPS2Q8NFH8 660 aa18.53■□□□□ 0.56
CIT-210ENST00000539413 U2AF1L4Q8WU68 220 aaKnown RBP18.53■□□□□ 0.56
CIT-210ENST00000539413 STAG1Q8WVM7 1258 aa18.53■□□□□ 0.56
CIT-210ENST00000539413 CHMP4CQ96CF2 233 aa18.53■□□□□ 0.56
CIT-210ENST00000539413 DEFB118Q96PH6 123 aa18.53■□□□□ 0.56
CIT-210ENST00000539413 DSCC1Q9BVC3 393 aa18.53■□□□□ 0.56
CIT-210ENST00000539413 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.53■□□□□ 0.56
CIT-210ENST00000539413 MROH8Q9H579 483 aa18.53■□□□□ 0.56
CIT-210ENST00000539413 PAK6Q9NQU5 681 aaPredicted RBP18.53■□□□□ 0.56
CIT-210ENST00000539413 ZNF214Q9UL59 606 aaPredicted RBP18.53■□□□□ 0.56
CIT-210ENST00000539413 COL11A1P12107 1806 aaPredicted RBP18.53■□□□□ 0.56
CIT-210ENST00000539413 SGPL1O95470 568 aa18.52■□□□□ 0.56
CIT-210ENST00000539413 BMP3P12645 472 aa18.52■□□□□ 0.56
CIT-210ENST00000539413 CHMLP26374 656 aa18.52■□□□□ 0.56
CIT-210ENST00000539413 TRMT44Q8IYL2 757 aaKnown RBP18.52■□□□□ 0.56
CIT-210ENST00000539413 PRPF38AQ8NAV1 312 aaKnown RBP18.52■□□□□ 0.56
CIT-210ENST00000539413 NPLOC4Q8TAT6 608 aa18.52■□□□□ 0.56
CIT-210ENST00000539413 NEDD4P46934 1319 aa18.51■□□□□ 0.55
CIT-210ENST00000539413 RPTORQ8N122 1335 aa18.51■□□□□ 0.55
CIT-210ENST00000539413 LAMA4Q16363 1823 aa18.51■□□□□ 0.55
CIT-210ENST00000539413 STRNO43815 780 aa18.51■□□□□ 0.55
CIT-210ENST00000539413 HOXC6P09630 235 aa18.51■□□□□ 0.55
CIT-210ENST00000539413 PCP11498 1178 aaKnown RBP18.51■□□□□ 0.55
CIT-210ENST00000539413 PRKAR2AP13861 404 aaKnown RBP18.51■□□□□ 0.55
CIT-210ENST00000539413 ADORA2AP29274 412 aa18.51■□□□□ 0.55
CIT-210ENST00000539413 STAT3P40763 770 aa18.51■□□□□ 0.55
CIT-210ENST00000539413 MAP3K21Q5TCX8 1036 aa18.51■□□□□ 0.55
CIT-210ENST00000539413 CENPQQ7L2Z9 268 aaPredicted RBP18.51■□□□□ 0.55
CIT-210ENST00000539413 RASGRP2Q7LDG7 609 aa18.51■□□□□ 0.55
CIT-210ENST00000539413 SKAP1Q86WV1 359 aa18.51■□□□□ 0.55
CIT-210ENST00000539413 RIOX2Q8IUF8 465 aa18.51■□□□□ 0.55
CIT-210ENST00000539413 KIFC2Q96AC6 838 aa18.51■□□□□ 0.55
CIT-210ENST00000539413 GMCL1Q96IK5 515 aa18.51■□□□□ 0.55
CIT-210ENST00000539413 RNF41Q9H4P4 317 aaPredicted RBP18.51■□□□□ 0.55
CIT-210ENST00000539413 HMX1Q9NP08 348 aaPredicted RBP18.51■□□□□ 0.55
CIT-210ENST00000539413 FLRT1Q9NZU1 646 aa18.51■□□□□ 0.55
CIT-210ENST00000539413 FEM1BQ9UK73 627 aa18.51■□□□□ 0.55
CIT-210ENST00000539413 ZNF236Q9UL36 1845 aa18.51■□□□□ 0.55
CIT-210ENST00000539413 RAD50Q92878 1312 aa18.5■□□□□ 0.55
CIT-210ENST00000539413 SLC25A27O95847 323 aa18.5■□□□□ 0.55
CIT-210ENST00000539413 MCCP23508 829 aa18.5■□□□□ 0.55
CIT-210ENST00000539413 CACNB2Q08289 660 aaPredicted RBP18.5■□□□□ 0.55
CIT-210ENST00000539413 TCP11L1Q9NUJ3 509 aa18.5■□□□□ 0.55
CIT-210ENST00000539413 ISY1Q9ULR0 285 aaKnown RBP18.5■□□□□ 0.55
CIT-210ENST00000539413 MTMR7Q9Y216 660 aa18.5■□□□□ 0.55
CIT-210ENST00000539413 TMEM232C9JQI7 657 aa18.49■□□□□ 0.55
CIT-210ENST00000539413 COBLO75128 1261 aa18.49■□□□□ 0.55
CIT-210ENST00000539413 SLC1A4P43007 532 aa18.49■□□□□ 0.55
CIT-210ENST00000539413 IMMTQ16891 758 aaKnown RBP18.49■□□□□ 0.55
CIT-210ENST00000539413 DPP9Q86TI2 863 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms