RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 CLIP2Q9UDT6 1046 aa22.72■■□□□ 1.23
TNFRSF1A-212ENST00000539372 IGKV6D-41A0A0C4DH26 115 aa22.71■■□□□ 1.23
TNFRSF1A-212ENST00000539372 FOXP2O15409 715 aa22.71■■□□□ 1.23
TNFRSF1A-212ENST00000539372 HOXC6P09630 235 aa22.71■■□□□ 1.23
TNFRSF1A-212ENST00000539372 FAM47AQ5JRC9 791 aa22.71■■□□□ 1.23
TNFRSF1A-212ENST00000539372 HABP4Q5JVS0 413 aaKnown RBP22.71■■□□□ 1.23
TNFRSF1A-212ENST00000539372 NECAB2Q7Z6G3 386 aa22.71■■□□□ 1.23
TNFRSF1A-212ENST00000539372 DPP9Q86TI2 863 aa22.71■■□□□ 1.23
TNFRSF1A-212ENST00000539372 CEP95Q96GE4 821 aa22.71■■□□□ 1.23
TNFRSF1A-212ENST00000539372 OGDHLQ9ULD0 1010 aa22.71■■□□□ 1.23
TNFRSF1A-212ENST00000539372 PPP1R9AQ9ULJ8 1098 aa22.71■■□□□ 1.23
TNFRSF1A-212ENST00000539372 COLQQ9Y215 455 aaPredicted RBP22.71■■□□□ 1.23
TNFRSF1A-212ENST00000539372 STRNO43815 780 aa22.7■■□□□ 1.22
TNFRSF1A-212ENST00000539372 NDUFB10O96000 172 aa22.7■■□□□ 1.22
TNFRSF1A-212ENST00000539372 SLC3A2P08195 630 aaKnown RBP22.7■■□□□ 1.22
TNFRSF1A-212ENST00000539372 MNX1P50219 401 aaPredicted RBP22.7■■□□□ 1.22
TNFRSF1A-212ENST00000539372 PDE4BQ07343 736 aa22.7■■□□□ 1.22
TNFRSF1A-212ENST00000539372 VPS53Q5VIR6 699 aa22.7■■□□□ 1.22
TNFRSF1A-212ENST00000539372 SMC5Q8IY18 1101 aa22.7■■□□□ 1.22
TNFRSF1A-212ENST00000539372 ANKLE1Q8NAG6 615 aa22.7■■□□□ 1.22
TNFRSF1A-212ENST00000539372 ADAMTS5Q9UNA0 930 aa22.7■■□□□ 1.22
TNFRSF1A-212ENST00000539372 PARP14Q460N5 1801 aa22.7■■□□□ 1.22
TNFRSF1A-212ENST00000539372 F5H6K3 240 aa22.69■■□□□ 1.22
TNFRSF1A-212ENST00000539372 VWA5AO00534 786 aa22.69■■□□□ 1.22
TNFRSF1A-212ENST00000539372 TSPY3P0CV98 308 aa22.69■■□□□ 1.22
TNFRSF1A-212ENST00000539372 TSPY8P0CW00 308 aa22.69■■□□□ 1.22
TNFRSF1A-212ENST00000539372 CYP2C19P33261 490 aa22.69■■□□□ 1.22
TNFRSF1A-212ENST00000539372 KLRC3Q07444 240 aa22.69■■□□□ 1.22
TNFRSF1A-212ENST00000539372 FAM227BQ96M60 508 aa22.69■■□□□ 1.22
TNFRSF1A-212ENST00000539372 MROH8Q9H579 483 aa22.69■■□□□ 1.22
TNFRSF1A-212ENST00000539372 MTMR4Q9NYA4 1195 aa22.69■■□□□ 1.22
TNFRSF1A-212ENST00000539372 TRIM6-TRIM34B2RNG4 842 aa22.68■■□□□ 1.22
TNFRSF1A-212ENST00000539372 EVI5O60447 810 aa22.68■■□□□ 1.22
TNFRSF1A-212ENST00000539372 COBLO75128 1261 aa22.68■■□□□ 1.22
TNFRSF1A-212ENST00000539372 TFAP4Q01664 338 aa22.68■■□□□ 1.22
TNFRSF1A-212ENST00000539372 CTDSPL2Q05D32 466 aa22.68■■□□□ 1.22
TNFRSF1A-212ENST00000539372 LHX8Q68G74 356 aa22.68■■□□□ 1.22
TNFRSF1A-212ENST00000539372 CHD1LQ86WJ1 897 aa22.68■■□□□ 1.22
TNFRSF1A-212ENST00000539372 LRRC47Q8N1G4 583 aaKnown RBP22.68■■□□□ 1.22
TNFRSF1A-212ENST00000539372 INCENPQ9NQS7 918 aa22.68■■□□□ 1.22
TNFRSF1A-212ENST00000539372 HELLSQ9NRZ9 838 aa22.68■■□□□ 1.22
TNFRSF1A-212ENST00000539372 SUPT16HQ9Y5B9 1047 aaKnown RBP22.68■■□□□ 1.22
TNFRSF1A-212ENST00000539372 NR2E3Q9Y5X4 410 aa22.68■■□□□ 1.22
TNFRSF1A-212ENST00000539372 A0A0D9SFI3 127 aa22.67■■□□□ 1.22
TNFRSF1A-212ENST00000539372 TTLL1O95922 423 aa22.67■■□□□ 1.22
TNFRSF1A-212ENST00000539372 CNGA1P29973 690 aa22.67■■□□□ 1.22
TNFRSF1A-212ENST00000539372 CHRDL2Q6WN34 429 aa22.67■■□□□ 1.22
TNFRSF1A-212ENST00000539372 NEDD1Q8NHV4 660 aa22.67■■□□□ 1.22
TNFRSF1A-212ENST00000539372 SLF1Q9BQI6 1058 aa22.67■■□□□ 1.22
TNFRSF1A-212ENST00000539372 NBPF3Q9H094 633 aa22.67■■□□□ 1.22
TNFRSF1A-212ENST00000539372 C11orf49Q9H6J7 331 aa22.67■■□□□ 1.22
TNFRSF1A-212ENST00000539372 SLC25A27O95847 323 aa22.66■■□□□ 1.22
TNFRSF1A-212ENST00000539372 FCER1AP12319 257 aa22.66■■□□□ 1.22
TNFRSF1A-212ENST00000539372 STAT3P40763 770 aa22.66■■□□□ 1.22
TNFRSF1A-212ENST00000539372 NUCB1Q02818 461 aa22.66■■□□□ 1.22
TNFRSF1A-212ENST00000539372 RIOX2Q8IUF8 465 aa22.66■■□□□ 1.22
TNFRSF1A-212ENST00000539372 TRPV1Q8NER1 839 aa22.66■■□□□ 1.22
TNFRSF1A-212ENST00000539372 REPS2Q8NFH8 660 aa22.66■■□□□ 1.22
TNFRSF1A-212ENST00000539372 MKL1Q969V6 931 aa22.66■■□□□ 1.22
TNFRSF1A-212ENST00000539372 RILPL2Q969X0 211 aa22.66■■□□□ 1.22
TNFRSF1A-212ENST00000539372 COL11A1P12107 1806 aaPredicted RBP22.66■■□□□ 1.22
TNFRSF1A-212ENST00000539372 ZNF236Q9UL36 1845 aa22.66■■□□□ 1.22
TNFRSF1A-212ENST00000539372 CEP290O15078 2479 aa22.66■■□□□ 1.22
TNFRSF1A-212ENST00000539372 PLIN4Q96Q06 1357 aa22.65■■□□□ 1.22
TNFRSF1A-212ENST00000539372 NMIQ13287 307 aaPredicted RBP22.65■■□□□ 1.22
TNFRSF1A-212ENST00000539372 MCMDC2Q4G0Z9 681 aa22.65■■□□□ 1.22
TNFRSF1A-212ENST00000539372 OLFML2BQ68BL8 750 aa22.65■■□□□ 1.22
TNFRSF1A-212ENST00000539372 ABRAQ8N0Z2 381 aa22.65■■□□□ 1.22
TNFRSF1A-212ENST00000539372 MMP19Q99542 508 aa22.65■■□□□ 1.22
TNFRSF1A-212ENST00000539372 ZNF214Q9UL59 606 aaPredicted RBP22.65■■□□□ 1.22
TNFRSF1A-212ENST00000539372 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.65■■□□□ 1.22
TNFRSF1A-212ENST00000539372 IGHA2P01877 340 aa22.64■■□□□ 1.21
TNFRSF1A-212ENST00000539372 PLEKHM2Q8IWE5 1019 aa22.64■■□□□ 1.21
TNFRSF1A-212ENST00000539372 CHMP4CQ96CF2 233 aa22.64■■□□□ 1.21
TNFRSF1A-212ENST00000539372 SLC5A4Q9NY91 659 aa22.64■■□□□ 1.21
TNFRSF1A-212ENST00000539372 DDX20Q9UHI6 824 aaKnown RBP22.64■■□□□ 1.21
TNFRSF1A-212ENST00000539372 TACC3Q9Y6A5 838 aa22.64■■□□□ 1.21
TNFRSF1A-212ENST00000539372 MYH4Q9Y623 1939 aa22.64■■□□□ 1.21
TNFRSF1A-212ENST00000539372 PGK2P07205 417 aa22.63■■□□□ 1.21
TNFRSF1A-212ENST00000539372 CYBAP13498 195 aa22.63■■□□□ 1.21
TNFRSF1A-212ENST00000539372 SLFN13Q68D06 897 aa22.63■■□□□ 1.21
TNFRSF1A-212ENST00000539372 ZNF589Q86UQ0 364 aaPredicted RBP22.63■■□□□ 1.21
TNFRSF1A-212ENST00000539372 C7orf61Q8IZ16 206 aa22.63■■□□□ 1.21
TNFRSF1A-212ENST00000539372 GMCL1P1Q8NEA9 526 aa22.63■■□□□ 1.21
TNFRSF1A-212ENST00000539372 KIFC2Q96AC6 838 aa22.63■■□□□ 1.21
TNFRSF1A-212ENST00000539372 PFASO15067 1338 aa22.62■■□□□ 1.21
TNFRSF1A-212ENST00000539372 TSPY2A6NKD2 308 aa22.62■■□□□ 1.21
TNFRSF1A-212ENST00000539372 NMT2O60551 498 aa22.62■■□□□ 1.21
TNFRSF1A-212ENST00000539372 SLC4A3P48751 1232 aa22.62■■□□□ 1.21
TNFRSF1A-212ENST00000539372 PRAMEF19Q5SWL8 479 aa22.62■■□□□ 1.21
TNFRSF1A-212ENST00000539372 PRPF38AQ8NAV1 312 aaKnown RBP22.62■■□□□ 1.21
TNFRSF1A-212ENST00000539372 MAML3Q96JK9 1138 aa22.62■■□□□ 1.21
TNFRSF1A-212ENST00000539372 ANAPC4Q9UJX5 808 aa22.62■■□□□ 1.21
TNFRSF1A-212ENST00000539372 ISY1Q9ULR0 285 aaKnown RBP22.62■■□□□ 1.21
TNFRSF1A-212ENST00000539372 SYNPO2Q9UMS6 1093 aa22.62■■□□□ 1.21
TNFRSF1A-212ENST00000539372 ALPK3Q96L96 1907 aa22.62■■□□□ 1.21
TNFRSF1A-212ENST00000539372 RANBP6O60518 1105 aaKnown RBP22.61■■□□□ 1.21
TNFRSF1A-212ENST00000539372 FGAP02671 866 aa22.61■■□□□ 1.21
TNFRSF1A-212ENST00000539372 KCTD2Q14681 263 aa22.61■■□□□ 1.21
TNFRSF1A-212ENST00000539372 ALX1Q15699 326 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms