RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 ADORA2AP29274 412 aa17.78■□□□□ 0.44
LRRK1-211ENST00000538064 CCND3P30281 292 aaPredicted RBP17.78■□□□□ 0.44
LRRK1-211ENST00000538064 MNX1P50219 401 aaPredicted RBP17.78■□□□□ 0.44
LRRK1-211ENST00000538064 FAM83BQ5T0W9 1011 aa17.78■□□□□ 0.44
LRRK1-211ENST00000538064 NPLOC4Q8TAT6 608 aa17.78■□□□□ 0.44
LRRK1-211ENST00000538064 FBXO28Q9NVF7 368 aa17.78■□□□□ 0.44
LRRK1-211ENST00000538064 PPP1R9AQ9ULJ8 1098 aa17.78■□□□□ 0.44
LRRK1-211ENST00000538064 ADAMTS5Q9UNA0 930 aa17.78■□□□□ 0.44
LRRK1-211ENST00000538064 NR2E3Q9Y5X4 410 aa17.78■□□□□ 0.44
LRRK1-211ENST00000538064 FOXP2O15409 715 aa17.77■□□□□ 0.44
LRRK1-211ENST00000538064 PRDM1O75626 825 aa17.77■□□□□ 0.44
LRRK1-211ENST00000538064 IGHA2P01877 340 aa17.77■□□□□ 0.44
LRRK1-211ENST00000538064 PPARAQ07869 468 aa17.77■□□□□ 0.44
LRRK1-211ENST00000538064 PLS1Q14651 629 aa17.77■□□□□ 0.44
LRRK1-211ENST00000538064 TMEM132BQ14DG7 1078 aa17.77■□□□□ 0.44
LRRK1-211ENST00000538064 SMC5Q8IY18 1101 aa17.77■□□□□ 0.44
LRRK1-211ENST00000538064 ABRAQ8N0Z2 381 aa17.77■□□□□ 0.44
LRRK1-211ENST00000538064 NBPF3Q9H094 633 aa17.77■□□□□ 0.44
LRRK1-211ENST00000538064 SYNPO2Q9UMS6 1093 aa17.77■□□□□ 0.44
LRRK1-211ENST00000538064 COLQQ9Y215 455 aaPredicted RBP17.77■□□□□ 0.44
LRRK1-211ENST00000538064 LAMA4Q16363 1823 aa17.77■□□□□ 0.43
LRRK1-211ENST00000538064 RAD21O60216 631 aa17.76■□□□□ 0.43
LRRK1-211ENST00000538064 SLC25A27O95847 323 aa17.76■□□□□ 0.43
LRRK1-211ENST00000538064 NDUFB10O96000 172 aa17.76■□□□□ 0.43
LRRK1-211ENST00000538064 SLC3A2P08195 630 aaKnown RBP17.76■□□□□ 0.43
LRRK1-211ENST00000538064 PDE4BQ07343 736 aa17.76■□□□□ 0.43
LRRK1-211ENST00000538064 OLFML2BQ68BL8 750 aa17.76■□□□□ 0.43
LRRK1-211ENST00000538064 LHX8Q68G74 356 aa17.76■□□□□ 0.43
LRRK1-211ENST00000538064 SAMD1Q6SPF0 538 aaPredicted RBP17.76■□□□□ 0.43
LRRK1-211ENST00000538064 NCAPG2Q86XI2 1143 aa17.76■□□□□ 0.43
LRRK1-211ENST00000538064 TICAM2Q86XR7 235 aa17.76■□□□□ 0.43
LRRK1-211ENST00000538064 ZNF444Q8N0Y2 327 aaPredicted RBP17.76■□□□□ 0.43
LRRK1-211ENST00000538064 REPS2Q8NFH8 660 aa17.76■□□□□ 0.43
LRRK1-211ENST00000538064 CEP95Q96GE4 821 aa17.76■□□□□ 0.43
LRRK1-211ENST00000538064 C11orf49Q9H6J7 331 aa17.76■□□□□ 0.43
LRRK1-211ENST00000538064 VWA5AO00534 786 aa17.75■□□□□ 0.43
LRRK1-211ENST00000538064 EVI5O60447 810 aa17.75■□□□□ 0.43
LRRK1-211ENST00000538064 COPB2P35606 906 aa17.75■□□□□ 0.43
LRRK1-211ENST00000538064 CCDC129Q6ZRS4 1044 aa17.75■□□□□ 0.43
LRRK1-211ENST00000538064 DPP9Q86TI2 863 aa17.75■□□□□ 0.43
LRRK1-211ENST00000538064 EXOC6Q8TAG9 804 aa17.75■□□□□ 0.43
LRRK1-211ENST00000538064 NUP88Q99567 741 aaPredicted RBP17.75■□□□□ 0.43
LRRK1-211ENST00000538064 SLF1Q9BQI6 1058 aa17.75■□□□□ 0.43
LRRK1-211ENST00000538064 LNPKQ9C0E8 428 aa17.75■□□□□ 0.43
LRRK1-211ENST00000538064 RWDD1Q9H446 243 aaPredicted RBP17.75■□□□□ 0.43
LRRK1-211ENST00000538064 SLC5A4Q9NY91 659 aa17.75■□□□□ 0.43
LRRK1-211ENST00000538064 MTMR4Q9NYA4 1195 aa17.75■□□□□ 0.43
LRRK1-211ENST00000538064 ZNF214Q9UL59 606 aaPredicted RBP17.75■□□□□ 0.43
LRRK1-211ENST00000538064 F5H6K3 240 aa17.74■□□□□ 0.43
LRRK1-211ENST00000538064 MSCO60682 206 aa17.74■□□□□ 0.43
LRRK1-211ENST00000538064 COBLO75128 1261 aa17.74■□□□□ 0.43
LRRK1-211ENST00000538064 TTLL1O95922 423 aa17.74■□□□□ 0.43
LRRK1-211ENST00000538064 TSPY3P0CV98 308 aa17.74■□□□□ 0.43
LRRK1-211ENST00000538064 TSPY8P0CW00 308 aa17.74■□□□□ 0.43
LRRK1-211ENST00000538064 CYBAP13498 195 aa17.74■□□□□ 0.43
LRRK1-211ENST00000538064 KLRC3Q07444 240 aa17.74■□□□□ 0.43
LRRK1-211ENST00000538064 CHRDL2Q6WN34 429 aa17.74■□□□□ 0.43
LRRK1-211ENST00000538064 RIOX2Q8IUF8 465 aa17.74■□□□□ 0.43
LRRK1-211ENST00000538064 GMCL1P1Q8NEA9 526 aa17.74■□□□□ 0.43
LRRK1-211ENST00000538064 NEDD1Q8NHV4 660 aa17.74■□□□□ 0.43
LRRK1-211ENST00000538064 MKL1Q969V6 931 aa17.74■□□□□ 0.43
LRRK1-211ENST00000538064 HELLSQ9NRZ9 838 aa17.74■□□□□ 0.43
LRRK1-211ENST00000538064 PFASO15067 1338 aa17.73■□□□□ 0.43
LRRK1-211ENST00000538064 FCER1AP12319 257 aa17.73■□□□□ 0.43
LRRK1-211ENST00000538064 CYP2C19P33261 490 aa17.73■□□□□ 0.43
LRRK1-211ENST00000538064 LRRC47Q8N1G4 583 aaKnown RBP17.73■□□□□ 0.43
LRRK1-211ENST00000538064 CLIP2Q9UDT6 1046 aa17.73■□□□□ 0.43
LRRK1-211ENST00000538064 DDX20Q9UHI6 824 aaKnown RBP17.73■□□□□ 0.43
LRRK1-211ENST00000538064 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.73■□□□□ 0.43
LRRK1-211ENST00000538064 A0A0D9SFI3 127 aa17.72■□□□□ 0.43
LRRK1-211ENST00000538064 COL6A1P12109 1028 aa17.72■□□□□ 0.43
LRRK1-211ENST00000538064 STAT3P40763 770 aa17.72■□□□□ 0.43
LRRK1-211ENST00000538064 VPS53Q5VIR6 699 aa17.72■□□□□ 0.43
LRRK1-211ENST00000538064 TRPV1Q8NER1 839 aa17.72■□□□□ 0.43
LRRK1-211ENST00000538064 MMP19Q99542 508 aa17.72■□□□□ 0.43
LRRK1-211ENST00000538064 TEX13BQ9BXU2 312 aa17.72■□□□□ 0.43
LRRK1-211ENST00000538064 PRO3102Q9H379 93 aa17.72■□□□□ 0.43
LRRK1-211ENST00000538064 ANAPC4Q9UJX5 808 aa17.72■□□□□ 0.43
LRRK1-211ENST00000538064 ZMYM6O95789 1325 aa17.72■□□□□ 0.43
LRRK1-211ENST00000538064 TFAP4Q01664 338 aa17.71■□□□□ 0.43
LRRK1-211ENST00000538064 FAM47AQ5JRC9 791 aa17.71■□□□□ 0.43
LRRK1-211ENST00000538064 PPP4R3BQ5MIZ7 849 aa17.71■□□□□ 0.43
LRRK1-211ENST00000538064 MAML3Q96JK9 1138 aa17.71■□□□□ 0.43
LRRK1-211ENST00000538064 FAM227BQ96M60 508 aa17.71■□□□□ 0.43
LRRK1-211ENST00000538064 RANBP2P49792 3224 aaKnown RBP17.71■□□□□ 0.43
LRRK1-211ENST00000538064 IGHDP01880 384 aa17.7■□□□□ 0.42
LRRK1-211ENST00000538064 CENPBP07199 599 aaPredicted RBP17.7■□□□□ 0.42
LRRK1-211ENST00000538064 FXR1P51114 621 aaKnown RBP eCLIP17.7■□□□□ 0.42
LRRK1-211ENST00000538064 IRX6P78412 446 aaPredicted RBP17.7■□□□□ 0.42
LRRK1-211ENST00000538064 NUCB1Q02818 461 aa17.7■□□□□ 0.42
LRRK1-211ENST00000538064 CTDSPL2Q05D32 466 aa17.7■□□□□ 0.42
LRRK1-211ENST00000538064 KCTD2Q14681 263 aa17.7■□□□□ 0.42
LRRK1-211ENST00000538064 ALX1Q15699 326 aa17.7■□□□□ 0.42
LRRK1-211ENST00000538064 MCMDC2Q4G0Z9 681 aa17.7■□□□□ 0.42
LRRK1-211ENST00000538064 CHD1LQ86WJ1 897 aa17.7■□□□□ 0.42
LRRK1-211ENST00000538064 C7orf61Q8IZ16 206 aa17.7■□□□□ 0.42
LRRK1-211ENST00000538064 PRPF38AQ8NAV1 312 aaKnown RBP17.7■□□□□ 0.42
LRRK1-211ENST00000538064 FEM1BQ9UK73 627 aa17.7■□□□□ 0.42
LRRK1-211ENST00000538064 SMCHD1A6NHR9 2005 aa17.7■□□□□ 0.42
LRRK1-211ENST00000538064 MCM3APO60318 1980 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms