RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 VWA3AA6NCI4 1184 aa17.84■□□□□ 0.45
MKS1-204ENST00000537529 APBA3O96018 575 aa17.84■□□□□ 0.45
MKS1-204ENST00000537529 TOP1P11387 765 aaKnown RBP17.84■□□□□ 0.45
MKS1-204ENST00000537529 GRAMD1CQ8IYS0 662 aa17.84■□□□□ 0.45
MKS1-204ENST00000537529 HSD3B7Q9H2F3 369 aa17.84■□□□□ 0.45
MKS1-204ENST00000537529 MTMR7Q9Y216 660 aa17.84■□□□□ 0.45
MKS1-204ENST00000537529 CCDC194A0A1B0GVG4 234 aa17.84■□□□□ 0.45
MKS1-204ENST00000537529 PARP1P09874 1014 aaKnown RBP17.84■□□□□ 0.45
MKS1-204ENST00000537529 BMP6P22004 513 aa17.84■□□□□ 0.45
MKS1-204ENST00000537529 MCM7P33993 719 aa17.84■□□□□ 0.45
MKS1-204ENST00000537529 WWC2Q6AWC2 1192 aa17.84■□□□□ 0.45
MKS1-204ENST00000537529 TMC6Q7Z403 805 aa17.84■□□□□ 0.45
MKS1-204ENST00000537529 HEATR3Q7Z4Q2 680 aa17.84■□□□□ 0.45
MKS1-204ENST00000537529 SPATA20Q8TB22 786 aa17.84■□□□□ 0.45
MKS1-204ENST00000537529 BARHL2Q9NY43 387 aa17.84■□□□□ 0.45
MKS1-204ENST00000537529 PLIN4Q96Q06 1357 aa17.83■□□□□ 0.45
MKS1-204ENST00000537529 FOCADQ5VW36 1801 aa17.83■□□□□ 0.45
MKS1-204ENST00000537529 A0A087X0B3 334 aa17.83■□□□□ 0.45
MKS1-204ENST00000537529 KLRF2D3W0D1 207 aa17.83■□□□□ 0.45
MKS1-204ENST00000537529 STXBP3O00186 592 aa17.83■□□□□ 0.45
MKS1-204ENST00000537529 SERPINC1P01008 464 aa17.83■□□□□ 0.45
MKS1-204ENST00000537529 SKILP12757 684 aa17.83■□□□□ 0.45
MKS1-204ENST00000537529 ARID5BQ14865 1188 aa17.83■□□□□ 0.45
MKS1-204ENST00000537529 SLC35G1Q2M3R5 365 aa17.83■□□□□ 0.45
MKS1-204ENST00000537529 ARL6IP4Q66PJ3 421 aaKnown RBP17.83■□□□□ 0.45
MKS1-204ENST00000537529 ZNF772Q68DY9 489 aaPredicted RBP17.83■□□□□ 0.45
MKS1-204ENST00000537529 MASTLQ96GX5 879 aa17.83■□□□□ 0.45
MKS1-204ENST00000537529 MYH1P12882 1939 aa17.83■□□□□ 0.44
MKS1-204ENST00000537529 CYTH3O43739 400 aa17.83■□□□□ 0.44
MKS1-204ENST00000537529 MMP10P09238 476 aa17.83■□□□□ 0.44
MKS1-204ENST00000537529 ATP1A3P13637 1013 aa17.83■□□□□ 0.44
MKS1-204ENST00000537529 SH3RF1Q7Z6J0 888 aa17.83■□□□□ 0.44
MKS1-204ENST00000537529 CCDC12Q8WUD4 166 aaPredicted RBP17.83■□□□□ 0.44
MKS1-204ENST00000537529 PAGE5Q96GU1 130 aa17.83■□□□□ 0.44
MKS1-204ENST00000537529 G3V3G9 751 aa17.82■□□□□ 0.44
MKS1-204ENST00000537529 SMARCA1P28370 1054 aa17.82■□□□□ 0.44
MKS1-204ENST00000537529 UBASH3AP57075 661 aa17.82■□□□□ 0.44
MKS1-204ENST00000537529 CCZ1BP86790 482 aa17.82■□□□□ 0.44
MKS1-204ENST00000537529 CCZ1P86791 482 aaPredicted RBP17.82■□□□□ 0.44
MKS1-204ENST00000537529 CT47A1Q5JQC4 288 aaPredicted RBP17.82■□□□□ 0.44
MKS1-204ENST00000537529 DCAF8Q5TAQ9 597 aa17.82■□□□□ 0.44
MKS1-204ENST00000537529 MYRIPQ8NFW9 859 aa17.82■□□□□ 0.44
MKS1-204ENST00000537529 CEP95Q96GE4 821 aa17.82■□□□□ 0.44
MKS1-204ENST00000537529 TTF2Q9UNY4 1162 aaKnown RBP17.82■□□□□ 0.44
MKS1-204ENST00000537529 F8W031 263 aaPredicted RBP17.81■□□□□ 0.44
MKS1-204ENST00000537529 M0R2N6 131 aa17.81■□□□□ 0.44
MKS1-204ENST00000537529 ADAMTS3O15072 1205 aa17.81■□□□□ 0.44
MKS1-204ENST00000537529 NOVP48745 357 aa17.81■□□□□ 0.44
MKS1-204ENST00000537529 PICALMQ13492 652 aa17.81■□□□□ 0.44
MKS1-204ENST00000537529 TYW1BQ6NUM6 668 aa17.81■□□□□ 0.44
MKS1-204ENST00000537529 CERS5Q8N5B7 392 aa17.81■□□□□ 0.44
MKS1-204ENST00000537529 ENOX1Q8TC92 643 aaKnown RBP17.81■□□□□ 0.44
MKS1-204ENST00000537529 FANCLQ9NW38 375 aa17.81■□□□□ 0.44
MKS1-204ENST00000537529 COL11A2P13942 1736 aaPredicted RBP17.81■□□□□ 0.44
MKS1-204ENST00000537529 DYNC1I1O14576 645 aa17.81■□□□□ 0.44
MKS1-204ENST00000537529 NRDCO43847 1150 aa17.81■□□□□ 0.44
MKS1-204ENST00000537529 GOLGA8HP0CJ92 632 aa17.81■□□□□ 0.44
MKS1-204ENST00000537529 LONP1P36776 959 aaKnown RBP17.81■□□□□ 0.44
MKS1-204ENST00000537529 AFMP43652 599 aa17.81■□□□□ 0.44
MKS1-204ENST00000537529 IQUBQ8NA54 791 aa17.81■□□□□ 0.44
MKS1-204ENST00000537529 RRP36Q96EU6 259 aaKnown RBP17.81■□□□□ 0.44
MKS1-204ENST00000537529 PCDHA6Q9UN73 950 aa17.81■□□□□ 0.44
MKS1-204ENST00000537529 PCDHA8Q9Y5H6 950 aa17.81■□□□□ 0.44
MKS1-204ENST00000537529 ERCC5P28715 1186 aaPredicted RBP17.8■□□□□ 0.44
MKS1-204ENST00000537529 TXLNAP40222 546 aa17.8■□□□□ 0.44
MKS1-204ENST00000537529 DOK7Q18PE1 504 aa17.8■□□□□ 0.44
MKS1-204ENST00000537529 CFAP100Q494V2 611 aa17.8■□□□□ 0.44
MKS1-204ENST00000537529 RASGRP4Q8TDF6 673 aa17.8■□□□□ 0.44
MKS1-204ENST00000537529 SEC63Q9UGP8 760 aaKnown RBP17.8■□□□□ 0.44
MKS1-204ENST00000537529 SFPQP23246 707 aaKnown RBP eCLIP17.79■□□□□ 0.44
MKS1-204ENST00000537529 NAPAP54920 295 aa17.79■□□□□ 0.44
MKS1-204ENST00000537529 GABPAQ06546 454 aa17.79■□□□□ 0.44
MKS1-204ENST00000537529 TPD52L1Q16890 204 aaPredicted RBP17.79■□□□□ 0.44
MKS1-204ENST00000537529 GSDMAQ96QA5 445 aa17.79■□□□□ 0.44
MKS1-204ENST00000537529 USP40Q9NVE5 1235 aa17.79■□□□□ 0.44
MKS1-204ENST00000537529 SWAP70Q9UH65 585 aa17.79■□□□□ 0.44
MKS1-204ENST00000537529 MYO3BQ8WXR4 1341 aa17.79■□□□□ 0.44
MKS1-204ENST00000537529 FMR1Q06787 632 aaKnown RBP eCLIP17.79■□□□□ 0.44
MKS1-204ENST00000537529 DPYDQ12882 1025 aa17.79■□□□□ 0.44
MKS1-204ENST00000537529 HHIPL2Q6UWX4 724 aa17.79■□□□□ 0.44
MKS1-204ENST00000537529 C4orf32Q8N8J7 132 aa17.79■□□□□ 0.44
MKS1-204ENST00000537529 TEKT1Q969V4 418 aa17.79■□□□□ 0.44
MKS1-204ENST00000537529 E2F4Q16254 413 aa17.78■□□□□ 0.44
MKS1-204ENST00000537529 IL17AQ16552 155 aa17.78■□□□□ 0.44
MKS1-204ENST00000537529 USP17L2Q6R6M4 530 aa17.78■□□□□ 0.44
MKS1-204ENST00000537529 KRT25Q7Z3Z0 450 aa17.78■□□□□ 0.44
MKS1-204ENST00000537529 ZMYND12Q9H0C1 365 aa17.78■□□□□ 0.44
MKS1-204ENST00000537529 C6orf50Q9HD87 102 aa17.78■□□□□ 0.44
MKS1-204ENST00000537529 MTMR4Q9NYA4 1195 aa17.78■□□□□ 0.44
MKS1-204ENST00000537529 NFE2L3Q9Y4A8 694 aa17.78■□□□□ 0.44
MKS1-204ENST00000537529 C10orf71Q711Q0 1435 aa17.78■□□□□ 0.44
MKS1-204ENST00000537529 LAD1O00515 517 aa17.78■□□□□ 0.44
MKS1-204ENST00000537529 SOGA3Q5TF21 947 aa17.78■□□□□ 0.44
MKS1-204ENST00000537529 ARMCX5Q6P1M9 558 aa17.78■□□□□ 0.44
MKS1-204ENST00000537529 RASGRP2Q7LDG7 609 aa17.78■□□□□ 0.44
MKS1-204ENST00000537529 DPF2Q92785 391 aa17.78■□□□□ 0.44
MKS1-204ENST00000537529 C16orf45Q96MC5 204 aaPredicted RBP17.78■□□□□ 0.44
MKS1-204ENST00000537529 DDX4Q9NQI0 724 aaKnown RBP17.78■□□□□ 0.44
MKS1-204ENST00000537529 hCG_1984214I3L0E3 225 aa17.77■□□□□ 0.44
MKS1-204ENST00000537529 GNA11P29992 359 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms