RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 MKL1Q969V6 931 aa13.5□□□□□ -0.25
CLSTN3-206ENST00000535668 ATG4CQ96DT6 458 aa13.5□□□□□ -0.25
CLSTN3-206ENST00000535668 TOX2Q96NM4 488 aa13.5□□□□□ -0.25
CLSTN3-206ENST00000535668 TANGO6Q9C0B7 1094 aa13.5□□□□□ -0.25
CLSTN3-206ENST00000535668 ARMT1Q9H993 441 aa13.5□□□□□ -0.25
CLSTN3-206ENST00000535668 NYAP2Q9P242 653 aa13.5□□□□□ -0.25
CLSTN3-206ENST00000535668 ARPP21Q9UBL0 812 aaPredicted RBP13.5□□□□□ -0.25
CLSTN3-206ENST00000535668 PPP1R9AQ9ULJ8 1098 aa13.5□□□□□ -0.25
CLSTN3-206ENST00000535668 SMCHD1A6NHR9 2005 aa13.5□□□□□ -0.25
CLSTN3-206ENST00000535668 ZNFX1Q9P2E3 1918 aaKnown RBP13.5□□□□□ -0.25
CLSTN3-206ENST00000535668 MYH8P13535 1937 aa13.49□□□□□ -0.25
CLSTN3-206ENST00000535668 DNAJC25-GNG10A0A024R161 153 aa13.49□□□□□ -0.25
CLSTN3-206ENST00000535668 PRKAB2O43741 272 aa13.49□□□□□ -0.25
CLSTN3-206ENST00000535668 CYP2D6P10635 497 aa13.49□□□□□ -0.25
CLSTN3-206ENST00000535668 RTP1P59025 263 aa13.49□□□□□ -0.25
CLSTN3-206ENST00000535668 NKX3-2P78367 333 aa13.49□□□□□ -0.25
CLSTN3-206ENST00000535668 LRRC41Q15345 812 aa13.49□□□□□ -0.25
CLSTN3-206ENST00000535668 ZNF467Q7Z7K2 595 aaPredicted RBP13.49□□□□□ -0.25
CLSTN3-206ENST00000535668 AMOTL1Q8IY63 956 aa13.49□□□□□ -0.25
CLSTN3-206ENST00000535668 DYNLL2Q96FJ2 89 aa13.49□□□□□ -0.25
CLSTN3-206ENST00000535668 STRBPQ96SI9 672 aaKnown RBP13.49□□□□□ -0.25
CLSTN3-206ENST00000535668 DNAJC2Q99543 621 aaKnown RBP13.49□□□□□ -0.25
CLSTN3-206ENST00000535668 TINF2Q9BSI4 451 aa13.49□□□□□ -0.25
CLSTN3-206ENST00000535668 TSEN34Q9BSV6 310 aaKnown RBP13.49□□□□□ -0.25
CLSTN3-206ENST00000535668 MYH7P12883 1935 aa13.49□□□□□ -0.25
CLSTN3-206ENST00000535668 SYNGAP1Q96PV0 1343 aa13.48□□□□□ -0.25
CLSTN3-206ENST00000535668 TMEM265A0A087WTH1 108 aa13.48□□□□□ -0.25
CLSTN3-206ENST00000535668 IGKV6D-41A0A0C4DH26 115 aa13.48□□□□□ -0.25
CLSTN3-206ENST00000535668 KBTBD13C9JR72 458 aa13.48□□□□□ -0.25
CLSTN3-206ENST00000535668 DLL1O00548 723 aa13.48□□□□□ -0.25
CLSTN3-206ENST00000535668 MPHOSPH10O00566 681 aaKnown RBP13.48□□□□□ -0.25
CLSTN3-206ENST00000535668 EEF2P13639 858 aaKnown RBP13.48□□□□□ -0.25
CLSTN3-206ENST00000535668 STAT3P40763 770 aa13.48□□□□□ -0.25
CLSTN3-206ENST00000535668 WDR78Q5VTH9 848 aa13.48□□□□□ -0.25
CLSTN3-206ENST00000535668 ANKRD33Q7Z3H0 272 aa13.48□□□□□ -0.25
CLSTN3-206ENST00000535668 DDRGK1Q96HY6 314 aa13.48□□□□□ -0.25
CLSTN3-206ENST00000535668 LBHD1Q9BQE6 289 aaPredicted RBP13.48□□□□□ -0.25
CLSTN3-206ENST00000535668 LRRCC1Q9C099 1032 aa13.48□□□□□ -0.25
CLSTN3-206ENST00000535668 PUS7LQ9H0K6 701 aaKnown RBP13.48□□□□□ -0.25
CLSTN3-206ENST00000535668 BOLA2Q9H3K6 86 aa13.48□□□□□ -0.25
CLSTN3-206ENST00000535668 GOPCQ9HD26 462 aa13.48□□□□□ -0.25
CLSTN3-206ENST00000535668 BAZ2AQ9UIF9 1905 aaKnown RBP13.48□□□□□ -0.25
CLSTN3-206ENST00000535668 GSG1L2A8MUP6 293 aa13.47□□□□□ -0.25
CLSTN3-206ENST00000535668 KIAA0355O15063 1070 aa13.47□□□□□ -0.25
CLSTN3-206ENST00000535668 ZNF865P0CJ78 1059 aaPredicted RBP13.47□□□□□ -0.25
CLSTN3-206ENST00000535668 CST5P28325 142 aaPredicted RBP13.47□□□□□ -0.25
CLSTN3-206ENST00000535668 SMAD3P84022 425 aaKnown RBP13.47□□□□□ -0.25
CLSTN3-206ENST00000535668 CCSAPQ6IQ19 270 aaPredicted RBP13.47□□□□□ -0.25
CLSTN3-206ENST00000535668 KBTBD3Q8NAB2 608 aa13.47□□□□□ -0.25
CLSTN3-206ENST00000535668 DCTPP1Q9H773 170 aa13.47□□□□□ -0.25
CLSTN3-206ENST00000535668 PDLIM7Q9NR12 457 aa13.47□□□□□ -0.25
CLSTN3-206ENST00000535668 PRKAG2Q9UGJ0 569 aa13.47□□□□□ -0.25
CLSTN3-206ENST00000535668 COG6Q9Y2V7 657 aa13.47□□□□□ -0.25
CLSTN3-206ENST00000535668 TACC3Q9Y6A5 838 aa13.47□□□□□ -0.25
CLSTN3-206ENST00000535668 SPTBN5Q9NRC6 3674 aaKnown RBP13.46□□□□□ -0.25
CLSTN3-206ENST00000535668 PLIN4Q96Q06 1357 aa13.46□□□□□ -0.25
CLSTN3-206ENST00000535668 ADAMTS4O75173 837 aa13.46□□□□□ -0.25
CLSTN3-206ENST00000535668 ZFYP08048 801 aaPredicted RBP13.46□□□□□ -0.25
CLSTN3-206ENST00000535668 FDX1P10109 184 aa13.46□□□□□ -0.25
CLSTN3-206ENST00000535668 GNAT2P19087 354 aa13.46□□□□□ -0.25
CLSTN3-206ENST00000535668 RASA1P20936 1047 aa13.46□□□□□ -0.25
CLSTN3-206ENST00000535668 CNGA1P29973 690 aa13.46□□□□□ -0.25
CLSTN3-206ENST00000535668 OAZ1P54368 228 aa13.46□□□□□ -0.25
CLSTN3-206ENST00000535668 MDM2Q00987 491 aaPredicted RBP13.46□□□□□ -0.25
CLSTN3-206ENST00000535668 GJC2Q5T442 439 aaPredicted RBP13.46□□□□□ -0.25
CLSTN3-206ENST00000535668 Q7L0L9 218 aa13.46□□□□□ -0.25
CLSTN3-206ENST00000535668 TICAM2Q86XR7 235 aa13.46□□□□□ -0.25
CLSTN3-206ENST00000535668 PRPF38AQ8NAV1 312 aaKnown RBP13.46□□□□□ -0.25
CLSTN3-206ENST00000535668 KLHDC9Q8NEP7 349 aa13.46□□□□□ -0.25
CLSTN3-206ENST00000535668 GUCD1Q96NT3 240 aa13.46□□□□□ -0.25
CLSTN3-206ENST00000535668 TEX13BQ9BXU2 312 aa13.46□□□□□ -0.25
CLSTN3-206ENST00000535668 ECHDC1Q9NTX5 307 aa13.46□□□□□ -0.25
CLSTN3-206ENST00000535668 SLC4A4Q9Y6R1 1079 aa13.46□□□□□ -0.25
CLSTN3-206ENST00000535668 SMIM22K7EJ46 135 aa13.45□□□□□ -0.26
CLSTN3-206ENST00000535668 RARBP10826 455 aa13.45□□□□□ -0.26
CLSTN3-206ENST00000535668 AKR1A1P14550 325 aa13.45□□□□□ -0.26
CLSTN3-206ENST00000535668 KCTD2Q14681 263 aa13.45□□□□□ -0.26
CLSTN3-206ENST00000535668 FAM47AQ5JRC9 791 aa13.45□□□□□ -0.26
CLSTN3-206ENST00000535668 RNF180Q86T96 592 aa13.45□□□□□ -0.26
CLSTN3-206ENST00000535668 NCAPG2Q86XI2 1143 aa13.45□□□□□ -0.26
CLSTN3-206ENST00000535668 SPICE1Q8N0Z3 855 aa13.45□□□□□ -0.26
CLSTN3-206ENST00000535668 APPBP2Q92624 585 aa13.45□□□□□ -0.26
CLSTN3-206ENST00000535668 SLF1Q9BQI6 1058 aa13.45□□□□□ -0.26
CLSTN3-206ENST00000535668 ZNF287Q9HBT7 754 aa13.45□□□□□ -0.26
CLSTN3-206ENST00000535668 COL11A1P12107 1806 aaPredicted RBP13.45□□□□□ -0.26
CLSTN3-206ENST00000535668 ELP1O95163 1332 aa13.44□□□□□ -0.26
CLSTN3-206ENST00000535668 MUC3AQ02505 3323 aa13.44□□□□□ -0.26
CLSTN3-206ENST00000535668 CYP2D7A0A087X1C5 515 aa13.44□□□□□ -0.26
CLSTN3-206ENST00000535668 TRIM43BA6NCK2 446 aa13.44□□□□□ -0.26
CLSTN3-206ENST00000535668 MOXD2PA6NHM9 499 aa13.44□□□□□ -0.26
CLSTN3-206ENST00000535668 APBB1O00213 710 aa13.44□□□□□ -0.26
CLSTN3-206ENST00000535668 PLA2G6O60733 806 aa13.44□□□□□ -0.26
CLSTN3-206ENST00000535668 ADCYAP1R1P41586 468 aa13.44□□□□□ -0.26
CLSTN3-206ENST00000535668 ATN1P54259 1190 aaPredicted RBP13.44□□□□□ -0.26
CLSTN3-206ENST00000535668 SLFNL1Q499Z3 407 aa13.44□□□□□ -0.26
CLSTN3-206ENST00000535668 CLEC10AQ8IUN9 316 aa13.44□□□□□ -0.26
CLSTN3-206ENST00000535668 GMCL1P1Q8NEA9 526 aa13.44□□□□□ -0.26
CLSTN3-206ENST00000535668 TRIM43Q96BQ3 446 aaPredicted RBP13.44□□□□□ -0.26
CLSTN3-206ENST00000535668 MMP19Q99542 508 aa13.44□□□□□ -0.26
CLSTN3-206ENST00000535668 SLC38A10Q9HBR0 1119 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms