RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 SAMD1Q6SPF0 538 aaPredicted RBP16.72■□□□□ 0.27
CCDC84-208ENST00000534656 DDRGK1Q96HY6 314 aa16.72■□□□□ 0.27
CCDC84-208ENST00000534656 MYCNP04198 464 aaPredicted RBP16.71■□□□□ 0.27
CCDC84-208ENST00000534656 CHGBP05060 677 aa16.71■□□□□ 0.27
CCDC84-208ENST00000534656 ADCYAP1R1P41586 468 aa16.71■□□□□ 0.27
CCDC84-208ENST00000534656 SNX17Q15036 470 aa16.71■□□□□ 0.27
CCDC84-208ENST00000534656 LRRC41Q15345 812 aa16.71■□□□□ 0.27
CCDC84-208ENST00000534656 KANSL2Q9H9L4 492 aa16.71■□□□□ 0.27
CCDC84-208ENST00000534656 NRBP1Q9UHY1 535 aa16.71■□□□□ 0.27
CCDC84-208ENST00000534656 SLC4A4Q9Y6R1 1079 aa16.71■□□□□ 0.27
CCDC84-208ENST00000534656 TRIM60Q495X7 471 aa16.7■□□□□ 0.26
CCDC84-208ENST00000534656 FAM47AQ5JRC9 791 aa16.7■□□□□ 0.26
CCDC84-208ENST00000534656 C1orf53Q5VUE5 145 aa16.7■□□□□ 0.26
CCDC84-208ENST00000534656 CTR9Q6PD62 1173 aa16.7■□□□□ 0.26
CCDC84-208ENST00000534656 RIOX2Q8IUF8 465 aa16.7■□□□□ 0.26
CCDC84-208ENST00000534656 MMP19Q99542 508 aa16.7■□□□□ 0.26
CCDC84-208ENST00000534656 CHMP4BQ9H444 224 aaKnown RBP16.7■□□□□ 0.26
CCDC84-208ENST00000534656 FBXO28Q9NVF7 368 aa16.7■□□□□ 0.26
CCDC84-208ENST00000534656 MYH8P13535 1937 aa16.69■□□□□ 0.26
CCDC84-208ENST00000534656 LTBP2Q14767 1821 aa16.69■□□□□ 0.26
CCDC84-208ENST00000534656 VWA5AO00534 786 aa16.69■□□□□ 0.26
CCDC84-208ENST00000534656 SHHQ15465 462 aa16.69■□□□□ 0.26
CCDC84-208ENST00000534656 ZSCAN25Q6NSZ9 544 aa16.69■□□□□ 0.26
CCDC84-208ENST00000534656 FERMT2Q96AC1 680 aa16.69■□□□□ 0.26
CCDC84-208ENST00000534656 GUCD1Q96NT3 240 aa16.69■□□□□ 0.26
CCDC84-208ENST00000534656 PUS7LQ9H0K6 701 aaKnown RBP16.69■□□□□ 0.26
CCDC84-208ENST00000534656 GOPCQ9HD26 462 aa16.69■□□□□ 0.26
CCDC84-208ENST00000534656 PRDM5Q9NQX1 630 aaPredicted RBP16.69■□□□□ 0.26
CCDC84-208ENST00000534656 PDLIM7Q9NR12 457 aa16.69■□□□□ 0.26
CCDC84-208ENST00000534656 PPP1R9AQ9ULJ8 1098 aa16.69■□□□□ 0.26
CCDC84-208ENST00000534656 DIS3Q9Y2L1 958 aaKnown RBP16.69■□□□□ 0.26
CCDC84-208ENST00000534656 BAZ2AQ9UIF9 1905 aaKnown RBP16.68■□□□□ 0.26
CCDC84-208ENST00000534656 PARP14Q460N5 1801 aa16.68■□□□□ 0.26
CCDC84-208ENST00000534656 PGK2P07205 417 aa16.68■□□□□ 0.26
CCDC84-208ENST00000534656 RARBP10826 455 aa16.68■□□□□ 0.26
CCDC84-208ENST00000534656 STAT3P40763 770 aa16.68■□□□□ 0.26
CCDC84-208ENST00000534656 KCTD2Q14681 263 aa16.68■□□□□ 0.26
CCDC84-208ENST00000534656 ZNF792Q3KQV3 632 aa16.68■□□□□ 0.26
CCDC84-208ENST00000534656 BADQ92934 168 aa16.68■□□□□ 0.26
CCDC84-208ENST00000534656 FAM161BQ96MY7 647 aa16.68■□□□□ 0.26
CCDC84-208ENST00000534656 TINF2Q9BSI4 451 aa16.68■□□□□ 0.26
CCDC84-208ENST00000534656 XPNPEP3Q9NQH7 507 aa16.68■□□□□ 0.26
CCDC84-208ENST00000534656 ZNF214Q9UL59 606 aaPredicted RBP16.68■□□□□ 0.26
CCDC84-208ENST00000534656 PHF24Q9UPV7 400 aa16.68■□□□□ 0.26
CCDC84-208ENST00000534656 A0A0C4DFX4 3053 aa16.67■□□□□ 0.26
CCDC84-208ENST00000534656 TRIM43BA6NCK2 446 aa16.67■□□□□ 0.26
CCDC84-208ENST00000534656 COPB2P35606 906 aa16.67■□□□□ 0.26
CCDC84-208ENST00000534656 C9orf50Q5SZB4 431 aa16.67■□□□□ 0.26
CCDC84-208ENST00000534656 FAM83BQ5T0W9 1011 aa16.67■□□□□ 0.26
CCDC84-208ENST00000534656 ZNF697Q5TEC3 545 aa16.67■□□□□ 0.26
CCDC84-208ENST00000534656 SH3RF1Q7Z6J0 888 aa16.67■□□□□ 0.26
CCDC84-208ENST00000534656 REPS2Q8NFH8 660 aa16.67■□□□□ 0.26
CCDC84-208ENST00000534656 TRIM43Q96BQ3 446 aaPredicted RBP16.67■□□□□ 0.26
CCDC84-208ENST00000534656 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.67■□□□□ 0.26
CCDC84-208ENST00000534656 LRRCC1Q9C099 1032 aa16.67■□□□□ 0.26
CCDC84-208ENST00000534656 ARPP21Q9UBL0 812 aaPredicted RBP16.67■□□□□ 0.26
CCDC84-208ENST00000534656 RAD21O60216 631 aa16.66■□□□□ 0.26
CCDC84-208ENST00000534656 TAL1P17542 331 aaPredicted RBP16.66■□□□□ 0.26
CCDC84-208ENST00000534656 TLE2Q04725 743 aa16.66■□□□□ 0.26
CCDC84-208ENST00000534656 SBK1Q52WX2 424 aa16.66■□□□□ 0.26
CCDC84-208ENST00000534656 RNF180Q86T96 592 aa16.66■□□□□ 0.26
CCDC84-208ENST00000534656 COL11A1P12107 1806 aaPredicted RBP16.66■□□□□ 0.26
CCDC84-208ENST00000534656 ZNFX1Q9P2E3 1918 aaKnown RBP16.65■□□□□ 0.26
CCDC84-208ENST00000534656 PGK1P00558 417 aa16.65■□□□□ 0.26
CCDC84-208ENST00000534656 ZNF865P0CJ78 1059 aaPredicted RBP16.65■□□□□ 0.26
CCDC84-208ENST00000534656 STRBPQ96SI9 672 aaKnown RBP16.65■□□□□ 0.26
CCDC84-208ENST00000534656 NYAP2Q9P242 653 aa16.65■□□□□ 0.26
CCDC84-208ENST00000534656 TACC3Q9Y6A5 838 aa16.65■□□□□ 0.26
CCDC84-208ENST00000534656 LAMA2P24043 3122 aaKnown RBP16.65■□□□□ 0.26
CCDC84-208ENST00000534656 ROBO3Q96MS0 1386 aa16.64■□□□□ 0.26
CCDC84-208ENST00000534656 SMARCA5O60264 1052 aaPredicted RBP16.64■□□□□ 0.25
CCDC84-208ENST00000534656 AKR1A1P14550 325 aa16.64■□□□□ 0.25
CCDC84-208ENST00000534656 RASA1P20936 1047 aa16.64■□□□□ 0.25
CCDC84-208ENST00000534656 DIEXFQ68CQ4 756 aaKnown RBP16.64■□□□□ 0.25
CCDC84-208ENST00000534656 GIMAP6Q6P9H5 292 aa16.64■□□□□ 0.25
CCDC84-208ENST00000534656 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.64■□□□□ 0.25
CCDC84-208ENST00000534656 MKNK2Q9HBH9 465 aa16.64■□□□□ 0.25
CCDC84-208ENST00000534656 CNPY2Q9Y2B0 182 aa16.64■□□□□ 0.25
CCDC84-208ENST00000534656 MYH7P12883 1935 aa16.63■□□□□ 0.25
CCDC84-208ENST00000534656 A0A1W2PQ45 241 aaPredicted RBP16.63■□□□□ 0.25
CCDC84-208ENST00000534656 A0A1W2PQY0 241 aa16.63■□□□□ 0.25
CCDC84-208ENST00000534656 GSG1L2A8MUP6 293 aa16.63■□□□□ 0.25
CCDC84-208ENST00000534656 F5H6K3 240 aa16.63■□□□□ 0.25
CCDC84-208ENST00000534656 CLTBP09497 229 aa16.63■□□□□ 0.25
CCDC84-208ENST00000534656 ITGB8P26012 769 aa16.63■□□□□ 0.25
CCDC84-208ENST00000534656 SMAD3P84022 425 aaKnown RBP16.63■□□□□ 0.25
CCDC84-208ENST00000534656 KLRC3Q07444 240 aa16.63■□□□□ 0.25
CCDC84-208ENST00000534656 MSL3Q8N5Y2 521 aaKnown RBP16.63■□□□□ 0.25
CCDC84-208ENST00000534656 NUP88Q99567 741 aaPredicted RBP16.63■□□□□ 0.25
CCDC84-208ENST00000534656 CDX2Q99626 313 aaPredicted RBP16.63■□□□□ 0.25
CCDC84-208ENST00000534656 SLF1Q9BQI6 1058 aa16.63■□□□□ 0.25
CCDC84-208ENST00000534656 TSEN34Q9BSV6 310 aaKnown RBP16.63■□□□□ 0.25
CCDC84-208ENST00000534656 TEX13BQ9BXU2 312 aa16.63■□□□□ 0.25
CCDC84-208ENST00000534656 SEMA6BQ9H3T3 888 aa16.63■□□□□ 0.25
CCDC84-208ENST00000534656 ECHDC1Q9NTX5 307 aa16.63■□□□□ 0.25
CCDC84-208ENST00000534656 KIAA0355O15063 1070 aa16.62■□□□□ 0.25
CCDC84-208ENST00000534656 ADAMTS4O75173 837 aa16.62■□□□□ 0.25
CCDC84-208ENST00000534656 SNRNP48Q6IEG0 339 aaKnown RBP16.62■□□□□ 0.25
CCDC84-208ENST00000534656 STK11IPQ8N1F8 1099 aa16.62■□□□□ 0.25
CCDC84-208ENST00000534656 KBTBD3Q8NAB2 608 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms