RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 RWDD1Q9H446 243 aaPredicted RBP15.97■□□□□ 0.15
CAPN1-228ENST00000534373 PPP1R9AQ9ULJ8 1098 aa15.97■□□□□ 0.15
CAPN1-228ENST00000534373 COLQQ9Y215 455 aaPredicted RBP15.97■□□□□ 0.15
CAPN1-228ENST00000534373 IGKV6D-41A0A0C4DH26 115 aa15.96■□□□□ 0.15
CAPN1-228ENST00000534373 F5H6K3 240 aa15.96■□□□□ 0.15
CAPN1-228ENST00000534373 ADORA2AP29274 412 aa15.96■□□□□ 0.15
CAPN1-228ENST00000534373 COPB2P35606 906 aa15.96■□□□□ 0.15
CAPN1-228ENST00000534373 MNX1P50219 401 aaPredicted RBP15.96■□□□□ 0.15
CAPN1-228ENST00000534373 KLRC3Q07444 240 aa15.96■□□□□ 0.15
CAPN1-228ENST00000534373 PLS1Q14651 629 aa15.96■□□□□ 0.15
CAPN1-228ENST00000534373 TMEM132BQ14DG7 1078 aa15.96■□□□□ 0.15
CAPN1-228ENST00000534373 NPLOC4Q8TAT6 608 aa15.96■□□□□ 0.15
CAPN1-228ENST00000534373 FLRT1Q9NZU1 646 aa15.96■□□□□ 0.15
CAPN1-228ENST00000534373 VWA5AO00534 786 aa15.95■□□□□ 0.14
CAPN1-228ENST00000534373 FCER1AP12319 257 aa15.95■□□□□ 0.14
CAPN1-228ENST00000534373 CCND3P30281 292 aaPredicted RBP15.95■□□□□ 0.14
CAPN1-228ENST00000534373 PPP4R3BQ5MIZ7 849 aa15.95■□□□□ 0.14
CAPN1-228ENST00000534373 NCAPG2Q86XI2 1143 aa15.95■□□□□ 0.14
CAPN1-228ENST00000534373 RIOX2Q8IUF8 465 aa15.95■□□□□ 0.14
CAPN1-228ENST00000534373 SMC5Q8IY18 1101 aa15.95■□□□□ 0.14
CAPN1-228ENST00000534373 STK11IPQ8N1F8 1099 aa15.95■□□□□ 0.14
CAPN1-228ENST00000534373 NEDD1Q8NHV4 660 aa15.95■□□□□ 0.14
CAPN1-228ENST00000534373 DIS3LQ8TF46 1054 aaKnown RBP15.95■□□□□ 0.14
CAPN1-228ENST00000534373 C11orf49Q9H6J7 331 aa15.95■□□□□ 0.14
CAPN1-228ENST00000534373 HELLSQ9NRZ9 838 aa15.95■□□□□ 0.14
CAPN1-228ENST00000534373 MTMR4Q9NYA4 1195 aa15.95■□□□□ 0.14
CAPN1-228ENST00000534373 PCDH10Q9P2E7 1040 aa15.95■□□□□ 0.14
CAPN1-228ENST00000534373 CLIP2Q9UDT6 1046 aa15.95■□□□□ 0.14
CAPN1-228ENST00000534373 GREB1LQ9C091 1923 aaPredicted RBP15.95■□□□□ 0.14
CAPN1-228ENST00000534373 CEP290O15078 2479 aa15.94■□□□□ 0.14
CAPN1-228ENST00000534373 A0A0G2JMZ2 1700 aa15.94■□□□□ 0.14
CAPN1-228ENST00000534373 TTLL1O95922 423 aa15.94■□□□□ 0.14
CAPN1-228ENST00000534373 STAT3P40763 770 aa15.94■□□□□ 0.14
CAPN1-228ENST00000534373 PPARAQ07869 468 aa15.94■□□□□ 0.14
CAPN1-228ENST00000534373 FAM83BQ5T0W9 1011 aa15.94■□□□□ 0.14
CAPN1-228ENST00000534373 PRPF38AQ8NAV1 312 aaKnown RBP15.94■□□□□ 0.14
CAPN1-228ENST00000534373 FBXO28Q9NVF7 368 aa15.94■□□□□ 0.14
CAPN1-228ENST00000534373 PLIN4Q96Q06 1357 aa15.93■□□□□ 0.14
CAPN1-228ENST00000534373 RAD21O60216 631 aa15.93■□□□□ 0.14
CAPN1-228ENST00000534373 COBLO75128 1261 aa15.93■□□□□ 0.14
CAPN1-228ENST00000534373 PRDM1O75626 825 aa15.93■□□□□ 0.14
CAPN1-228ENST00000534373 NDUFB10O96000 172 aa15.93■□□□□ 0.14
CAPN1-228ENST00000534373 TSPY3P0CV98 308 aa15.93■□□□□ 0.14
CAPN1-228ENST00000534373 TSPY8P0CW00 308 aa15.93■□□□□ 0.14
CAPN1-228ENST00000534373 COL6A1P12109 1028 aa15.93■□□□□ 0.14
CAPN1-228ENST00000534373 ALX1Q15699 326 aa15.93■□□□□ 0.14
CAPN1-228ENST00000534373 GMCL1P1Q8NEA9 526 aa15.93■□□□□ 0.14
CAPN1-228ENST00000534373 REPS2Q8NFH8 660 aa15.93■□□□□ 0.14
CAPN1-228ENST00000534373 CEP95Q96GE4 821 aa15.93■□□□□ 0.14
CAPN1-228ENST00000534373 SLF1Q9BQI6 1058 aa15.93■□□□□ 0.14
CAPN1-228ENST00000534373 DDX20Q9UHI6 824 aaKnown RBP15.93■□□□□ 0.14
CAPN1-228ENST00000534373 ZNF214Q9UL59 606 aaPredicted RBP15.93■□□□□ 0.14
CAPN1-228ENST00000534373 DIS3Q9Y2L1 958 aaKnown RBP15.93■□□□□ 0.14
CAPN1-228ENST00000534373 ZNF236Q9UL36 1845 aa15.93■□□□□ 0.14
CAPN1-228ENST00000534373 ATP2A1O14983 1001 aa15.92■□□□□ 0.14
CAPN1-228ENST00000534373 CYP2C19P33261 490 aa15.92■□□□□ 0.14
CAPN1-228ENST00000534373 TFAP4Q01664 338 aa15.92■□□□□ 0.14
CAPN1-228ENST00000534373 MCMDC2Q4G0Z9 681 aa15.92■□□□□ 0.14
CAPN1-228ENST00000534373 SAMD1Q6SPF0 538 aaPredicted RBP15.92■□□□□ 0.14
CAPN1-228ENST00000534373 CHRDL2Q6WN34 429 aa15.92■□□□□ 0.14
CAPN1-228ENST00000534373 PRO3102Q9H379 93 aa15.92■□□□□ 0.14
CAPN1-228ENST00000534373 NRBP1Q9UHY1 535 aa15.92■□□□□ 0.14
CAPN1-228ENST00000534373 ANAPC4Q9UJX5 808 aa15.92■□□□□ 0.14
CAPN1-228ENST00000534373 FEM1BQ9UK73 627 aa15.92■□□□□ 0.14
CAPN1-228ENST00000534373 A0A1W2PPC1 479 aa15.91■□□□□ 0.14
CAPN1-228ENST00000534373 FDX1P10109 184 aa15.91■□□□□ 0.14
CAPN1-228ENST00000534373 CYBAP13498 195 aa15.91■□□□□ 0.14
CAPN1-228ENST00000534373 CNGA1P29973 690 aa15.91■□□□□ 0.14
CAPN1-228ENST00000534373 KCTD2Q14681 263 aa15.91■□□□□ 0.14
CAPN1-228ENST00000534373 MAML3Q96JK9 1138 aa15.91■□□□□ 0.14
CAPN1-228ENST00000534373 MMP19Q99542 508 aa15.91■□□□□ 0.14
CAPN1-228ENST00000534373 TEX13BQ9BXU2 312 aa15.91■□□□□ 0.14
CAPN1-228ENST00000534373 LNPKQ9C0E8 428 aa15.91■□□□□ 0.14
CAPN1-228ENST00000534373 OSBPL3Q9H4L5 887 aa15.91■□□□□ 0.14
CAPN1-228ENST00000534373 PARP14Q460N5 1801 aa15.91■□□□□ 0.14
CAPN1-228ENST00000534373 FOXP2O15409 715 aa15.9■□□□□ 0.14
CAPN1-228ENST00000534373 SEPT4O43236 478 aa15.9■□□□□ 0.14
CAPN1-228ENST00000534373 ZBED4O75132 1171 aa15.9■□□□□ 0.14
CAPN1-228ENST00000534373 FGRP09769 529 aa15.9■□□□□ 0.14
CAPN1-228ENST00000534373 FXR1P51114 621 aaKnown RBP eCLIP15.9■□□□□ 0.14
CAPN1-228ENST00000534373 CCDC129Q6ZRS4 1044 aa15.9■□□□□ 0.14
CAPN1-228ENST00000534373 CHD1LQ86WJ1 897 aa15.9■□□□□ 0.14
CAPN1-228ENST00000534373 ARRDC4Q8NCT1 418 aa15.9■□□□□ 0.14
CAPN1-228ENST00000534373 NUP88Q99567 741 aaPredicted RBP15.9■□□□□ 0.14
CAPN1-228ENST00000534373 RBM27Q9P2N5 1060 aaKnown RBP15.9■□□□□ 0.14
CAPN1-228ENST00000534373 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.9■□□□□ 0.14
CAPN1-228ENST00000534373 PFASO15067 1338 aa15.9■□□□□ 0.14
CAPN1-228ENST00000534373 BMP3P12645 472 aa15.89■□□□□ 0.13
CAPN1-228ENST00000534373 OAZ1P54368 228 aa15.89■□□□□ 0.13
CAPN1-228ENST00000534373 NUCB1Q02818 461 aa15.89■□□□□ 0.13
CAPN1-228ENST00000534373 FAM47AQ5JRC9 791 aa15.89■□□□□ 0.13
CAPN1-228ENST00000534373 SLFN13Q68D06 897 aa15.89■□□□□ 0.13
CAPN1-228ENST00000534373 MSL3Q8N5Y2 521 aaKnown RBP15.89■□□□□ 0.13
CAPN1-228ENST00000534373 TRPV1Q8NER1 839 aa15.89■□□□□ 0.13
CAPN1-228ENST00000534373 SLC38A10Q9HBR0 1119 aa15.89■□□□□ 0.13
CAPN1-228ENST00000534373 CTDP1Q9Y5B0 961 aaPredicted RBP15.89■□□□□ 0.13
CAPN1-228ENST00000534373 TSPY2A6NKD2 308 aa15.88■□□□□ 0.13
CAPN1-228ENST00000534373 TRIM6-TRIM34B2RNG4 842 aa15.88■□□□□ 0.13
CAPN1-228ENST00000534373 DNM1LO00429 736 aa15.88■□□□□ 0.13
CAPN1-228ENST00000534373 ORC4O43929 436 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms